FFCP PHASE1:Hg19::chr22:29196433..29196445,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7494|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12801|TSSclassifier=S|UniProt=|association_with_transcript=111bp_to_ENST00000482720_5end|coexpression_cluster_id=C4093|description=CAGE_peak_4_at_XBP1_5end|id=chr22:29196433..29196445,-|ontology_enrichment_celltype=CL:0002057!4.50e-07!42|ontology_enrichment_celltype_v019=CL:0000236;5.13e-07;13|ontology_enrichment_celltype_v019_2=CL:0000557,1.27e-07,67|ontology_enrichment_development_v019=UBERON:0009497;5.16e-07;13!UBERON:0004161;8.33e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5093;2.01e-08;4!DOID:1612;2.01e-08;4|ontology_enrichment_disease_v019_2=DOID:5093,2.03e-08,4;DOID:1612,2.03e-08,4|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002365;7.82e-07;31!UBERON:0002330;7.82e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.11e-09,114;UBERON:0002365,5.46e-07,31;UBERON:0002330,5.46e-07,31;UBERON:0009854,6.63e-07,23;UBERON:0002371,9.63e-07,76|phase1_expression=0.363356758541113,0.428201047781966,0.704772020479856,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0,0,0,2.75354993794233,0,0.928896739896456,0,0.30120591877825,1.84877005083394,0.154934401160603,0.142169232487422,2.64240395401362,1.66198622559563,2.20598892217156,1.30206522429511,0.223915474239924,2.26725566213286,0,0.290796477559129,0,0.727752183563449,0.232429036905685,1.23350366406548,0.309706370895104,0.863077176966451,1.5369642391746,0.945928919554341,2.41321976515633,1.93645405075148,4.06279459783025,0.564727018627814,0,0.674170453335254,2.14258724659632,2.88836124368484,2.55734850319616,0.659702600373432,0.797854630486527,0.852449501065388,3.48251086354301,1.13477044938228,2.4912889959823,0,0.521482918420201,0.65156653411535,11.502590550034,7.36555271975129,5.37986058649504,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,5.27988733383968,1.63841583378639,2.66852776159066,5.12076267079809,0.400395987036012,3.4485146397269,3.30522436392431,5.72432252721218,0.569212969109448,0,0.382273228125229,1.32171328579026,0,1.58030450865046,0,0,0,0,0,0.473447805734733,0,0.334231370655521,0,0,0,0.25618263945135,0.130059347559878,0.822189523018381,0,0.579606171470105,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.710331756132051,0,0.201606743224732,0.802320587350522,0.724122019413995,0,0,0.12786256184353,1.0843174571537,0.50133791063589,0.289693037921647,0.795285947051099,0.973269740605272,0,0,0,1.37528029272598,0,0,0,0.174129737299267,0.26591592103773,1.19245312152671,2.85997455390064,0.74291500265913,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0.49333509683432,0,0.269421344139376,0,0.454072282934794,0,0,0,0,0.448346041655403,0,0.161872944368132,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0.438977620880838,0,0.600952235626387,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.558350568994769,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0.269662616320329,0,0,0,0,0.4115740113314,0,27.8861076608028,10.8110993834539,10.0434284135839,0,0.983907508344908,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0,59.2653298469456,48.9337112394077,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.567100388969546,0.268675568108545,0.290633938513962,0,106.415259385524,1.58487181223807,0.621984346622316,0.576479813667846,0.50496973370552,0,0,1.17217447210047,0,0,0,0,0,0,0.1466765716419,0.646358578788889,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,1.2162378064119,0,0,0.239624855491583,0,0,1.15825045334063,0.205476322550383,0,0.336255431980582,0.788123040807709,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,4.5481500811197,2.0694614258501,0.664225598535437,0,0.260650843404249,0,0,0,0.647142602455851,0.533637789017222,0,0,0.30239029332968,0.496215615637554,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0.64341568457443,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0,0.483437798366489,0.40101294060657,0.184161977871793,0.114814448164607,0,0.393373244878272,0.902399225814824,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,2.88514832613622,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0.356128142586949,0.661139661443912,1.34533047155574,0.25522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rt_description=p4@XBP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12801 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=111bp_to_ENST00000482720_5end | |||
|coexpression_cluster_id=C4093 | |||
|description=CAGE_peak_4_at_XBP1_5end | |||
|id=chr22:29196433..29196445,- | |||
|ontology_enrichment_celltype=CL:0002057!4.50e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.13e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.27e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.16e-07;13!UBERON:0004161;8.33e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.01e-08;4!DOID:1612;2.01e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.03e-08,4;DOID:1612,2.03e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;7.82e-07;31!UBERON:0002330;7.82e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.11e-09,114;UBERON:0002365,5.46e-07,31;UBERON:0002330,5.46e-07,31;UBERON:0009854,6.63e-07,23;UBERON:0002371,9.63e-07,76 | |||
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| |||
|short_description=p4@XBP1 | |||
}} |
Revision as of 11:21, 12 September 2013
Short description: | p4@XBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_XBP1_5end |
Coexpression cluster: | C4093_pancreas_breast_MCF7_salivary_Mast_parotid_submaxillary |
Association with transcript: | 111bp_to_ENST00000482720_5end |
EntrezGene: | XBP1 |
HGNC: | 12801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.27e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.11e-09 | 114 |
exocrine gland | 5.46e-07 | 31 |
exocrine system | 5.46e-07 | 31 |
digestive tract diverticulum | 6.63e-07 | 23 |
bone marrow | 9.63e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.03e-08 | 4 |
breast cancer | 2.03e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.