FFCP PHASE1:Hg19::chr22:22089961..22090000,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29799|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12845|TSSclassifier=S|UniProt=B5MCX2|association_with_transcript=43bp_to_ENST00000403503_5end|coexpression_cluster_id=C1|description=CAGE_peak_3_at_YPEL1_5end|id=chr22:22089961..22090000,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.38e-09!57;UBERON:0005068!4.38e-09!57;UBERON:0006241!4.38e-09!57;UBERON:0007135!4.38e-09!57;UBERON:0002616!1.38e-08!59;UBERON:0002780!2.30e-08!41;UBERON:0001890!2.30e-08!41;UBERON:0006240!2.30e-08!41;UBERON:0002020!3.14e-08!34;UBERON:0003528!3.14e-08!34;UBERON:0003080!4.58e-08!42;UBERON:0000955!8.69e-08!69;UBERON:0006238!8.69e-08!69;UBERON:0001950!1.35e-07!20;UBERON:0002791!1.89e-07!33;UBERON:0001017!3.71e-07!82;UBERON:0001893!3.90e-07!34;UBERON:0000956!9.07e-07!25;UBERON:0000203!9.07e-07!25|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,14.604166917995,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.513372145118994,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.213425530045242,0,0,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0.222886768554957,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.583209226766509,0.347249989866585,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0.171986032471617,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0.159633859057151,0.41023272848151,0.756215088665154,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0.672567444437648,0,0,0,0.115233987555779,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0.485710993059139,0.701818390386317,0,0.118920090777569,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.203974470572744,0.872701380680755,0.5290268405154,0,0.462175628631418,0,0,0.109265571963696,0,0.101988829741982,0,0,0,25.8405360924196,45.5539021265503,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0.202056159043763,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p3@YPEL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29799 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12845 | |||
|TSSclassifier=S | |||
|UniProt=B5MCX2 | |||
|association_with_transcript=43bp_to_ENST00000403503_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_YPEL1_5end | |||
|id=chr22:22089961..22090000,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.38e-09!57;UBERON:0005068!4.38e-09!57;UBERON:0006241!4.38e-09!57;UBERON:0007135!4.38e-09!57;UBERON:0002616!1.38e-08!59;UBERON:0002780!2.30e-08!41;UBERON:0001890!2.30e-08!41;UBERON:0006240!2.30e-08!41;UBERON:0002020!3.14e-08!34;UBERON:0003528!3.14e-08!34;UBERON:0003080!4.58e-08!42;UBERON:0000955!8.69e-08!69;UBERON:0006238!8.69e-08!69;UBERON:0001950!1.35e-07!20;UBERON:0002791!1.89e-07!33;UBERON:0001017!3.71e-07!82;UBERON:0001893!3.90e-07!34;UBERON:0000956!9.07e-07!25;UBERON:0000203!9.07e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,14.604166917995,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.513372145118994,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.213425530045242,0,0,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0.222886768554957,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.583209226766509,0.347249989866585,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0.171986032471617,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0.159633859057151,0.41023272848151,0.756215088665154,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0.672567444437648,0,0,0,0.115233987555779,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0.485710993059139,0.701818390386317,0,0.118920090777569,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.203974470572744,0.872701380680755,0.5290268405154,0,0.462175628631418,0,0,0.109265571963696,0,0.101988829741982,0,0,0,25.8405360924196,45.5539021265503,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0.202056159043763,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p3@YPEL1 | |||
}} |
Revision as of 11:05, 12 September 2013
Short description: | p3@YPEL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_YPEL1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 43bp_to_ENST00000403503_5end |
EntrezGene: | YPEL1 |
HGNC: | 12845 |
UniProt: | B5MCX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.