FFCP PHASE1:Hg19::chr22:19868692..19868724,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18155|TSSclassifier=S|UniProt=|association_with_transcript=-5bp_to_ENST00000485358_5end|description=CAGE_peak_2_at_TXNRD2_5end|id=chr22:19868692..19868724,-|ontology_enrichment_celltype=CL:0000213!5.30e-23!57;CL:0000215!5.30e-23!57;CL:0000066!1.12e-22!254;CL:0002078!1.16e-19!44;CL:0000222!5.09e-19!119;CL:0002139!1.01e-18!24;CL:0000115!9.93e-17!35;CL:0002321!1.77e-16!248;CL:0000220!2.79e-16!246;CL:0000076!1.87e-15!62;CL:0000071!2.63e-14!18;CL:0002546!2.63e-14!18;CL:0000548!4.58e-14!679;CL:0000004!4.58e-14!679;CL:0000255!4.58e-14!679;CL:0000012!1.49e-13!682;CL:0000057!1.01e-10!75;CL:0000055!2.07e-10!180;CL:0000063!3.13e-08!578;CL:0000144!3.14e-08!625;CL:0000003!1.08e-07!722;CL:0000077!1.49e-07!19;CL:1000413!1.60e-07!9|ontology_enrichment_celltype_v019=CL:0002139;9.94e-32;24!CL:0000115;2.70e-25;36!CL:0000071;6.04e-24;18!CL:0002078;2.61e-20;45!CL:0000213;1.04e-18;58!CL:0000215;1.04e-18;58!CL:1000413;5.26e-12;9!CL:0002543;1.63e-09;6!CL:0002138;2.57e-09;6!CL:0000076;2.90e-09;63!CL:0002544;9.51e-09;6!CL:0000349;1.14e-08;19!CL:0000077;5.85e-08;19!CL:1000746;8.99e-07;7!CL:1000612;8.99e-07;7|ontology_enrichment_celltype_v019_2=CL:0000213,1.31e-35,58;CL:0000215,1.31e-35,58;CL:0002139,1.16e-31,24;CL:0002078,2.32e-31,45;CL:0000115,2.38e-30,36;CL:0000071,6.73e-24,18;CL:0002546,6.73e-24,18;CL:0000066,1.41e-17,253;CL:0000076,1.02e-16,63;CL:0000222,1.84e-16,121;CL:1000413,5.23e-12,9;CL:0002543,1.85e-09,6;CL:0005020,2.68e-09,6;CL:0002138,2.68e-09,6;CL:0005022,2.68e-09,6;CL:0002321,7.73e-09,250;CL:0000349,8.43e-09,19;CL:0002544,1.28e-08,6;CL:0000077,3.96e-08,19;CL:1000746,6.22e-07,7;CL:1000612,6.22e-07,7|ontology_enrichment_development_v019=CL:0002546;6.04e-24;18!CL:0005022;2.57e-09;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000487!1.28e-14!22;UBERON:0006914!2.48e-14!25;UBERON:0001986!2.63e-14!18;UBERON:0004638!2.63e-14!18;UBERON:0004852!2.63e-14!18;UBERON:0002049!5.08e-09!79;UBERON:0007798!5.08e-09!79;UBERON:0005631!3.07e-08!14;UBERON:0000158!3.07e-08!14;UBERON:0000055!7.48e-08!69;UBERON:0003915!1.60e-07!9;UBERON:0004700!1.60e-07!9;UBERON:0001917!1.60e-07!9;UBERON:0000468!7.00e-07!659|ontology_enrichment_uberon_v019=UBERON:0004638;6.04e-24;18!UBERON:0001986;6.04e-24;18!UBERON:0004852;6.04e-24;18!UBERON:0000487;2.90e-23;22!UBERON:0006914;1.00e-21;25!UBERON:0000490;1.53e-13;33!UBERON:0003915;5.26e-12;9!UBERON:0004700;5.26e-12;9!UBERON:0001917;5.26e-12;9!UBERON:0001473;8.44e-09;8!UBERON:0004536;8.44e-09;8!UBERON:0006558;8.44e-09;8!UBERON:0001851;2.75e-07;15!UBERON:0000074;8.99e-07;7!UBERON:0001229;8.99e-07;7!UBERON:0000055;9.10e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.73e-24,18;UBERON:0001986,6.73e-24,18;UBERON:0004852,6.73e-24,18;UBERON:0000487,3.17e-23,22;UBERON:0006914,9.54e-22,25;UBERON:0003915,5.23e-12,9;UBERON:0004700,5.23e-12,9;UBERON:0001917,5.23e-12,9;UBERON:0000055,2.09e-10,68;UBERON:0002049,1.57e-09,78;UBERON:0007798,1.57e-09,78;UBERON:0005631,2.98e-09,14;UBERON:0000158,2.98e-09,14;UBERON:0001473,9.12e-09,8;UBERON:0004536,9.12e-09,8;UBERON:0006558,9.12e-09,8;UBERON:0003124,4.93e-08,7;UBERON:0001851,1.93e-07,15;UBERON:0010532,6.22e-07,7;UBERON:0000074,6.22e-07,7;UBERON:0001229,6.22e-07,7;UBERON:0001230,6.22e-07,7;UBERON:0003220,6.22e-07,7;UBERON:0005749,6.22e-07,7;UBERON:0004199,6.22e-07,7;UBERON:0004209,6.22e-07,7;UBERON:0004198,6.22e-07,7|phase1_expression=0.54503513781167,0.428201047781966,0,2.00146596706261,0,0.872338524100369,0,0,0,0.737201809504527,0,1.52908960491121,2.37390280405608,0,0.331397375727916,0,1.80808358407193,0,0.487932798790507,0,0.612002073732759,0,0.286235987131057,0.136874425072884,2.00868223351684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0,0,0.661743720148475,0.443458794925128,0.614843499851882,0,0,0,0,0,0,0,0,0,13.1183188862025,8.60234595106124,10.7613555498354,1.13061588384802,1.67799774483962,5.50236083880135,10.4497483268405,4.39308490587859,5.33649394030065,4.68608857870538,16.1131726843659,6.84244895146661,17.5724681434682,5.51494620518803,4.0507097394088,11.16246603551,5.16417557040191,4.0540132973996,36.795992991812,6.6448596169769,19.0529813687624,0,0,1.3082821564276,0.496971951695318,1.01304409331664,0.264818361626438,0,0,0.560677600142307,0,3.20667812942308,0.311211035399766,0.269421344139376,0.163461903113459,0.302714855289863,0,1.17160715916898,0.312160076830321,1.1409436430889,1.04614076386261,0.23486899728753,0.161872944368132,0.842704840213491,2.04154171254893,1.35117749042945,1.75653827998801,1.18800285728205,2.22540236350701,0,2.15585442544872,2.02003336744879,1.12606667884768,3.60183350129438,2.19488810440419,3.37136575378922,0.9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1.68942440653073,0,8.98118888501116,1.51929978088691,0,0,0,0,1.63804924423206,0.737318726261158,0.633936370075881,0,0,0,0.567515953566836,0.184105950251841,1.11903606175556,0,0,0,0,0.109209638192014,0.509197589862076,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0.392590874004102,0,0.183428598521679,0.231051332300676,1.52552838186867,0.690359926060101,0,0.150420656698515,5.44603685499504,0,0,2.78412259767164,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0.887023701626388,0,0.171488009437418,0,0,5.43691668066254,0.333694205676207,0,0,0.280272163313789,0,0,0,0.142953088353313,0,8.48562405187314,0,0,0,0,0,0,1.30165200803622,1.19298766662821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0.470317296361523,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0.352894871715692,0,0,0,0,2.99765968167051,0,0.436350690340377,0,0,1.38652688589425,0.865253124247578,3.15416062087697,0,0.126698501011437,3.05966489225945,1.87052183685892,5.88127357023007,0,0.0757786982182394,0,0,0,0,0,0,0,1.56984607612859,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,4.69600321861948,0,0.359300808426348,0,0,0,0,0,0|short_description=p2@TXNRD2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18155 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000485358_5end | |||
|description=CAGE_peak_2_at_TXNRD2_5end | |||
|id=chr22:19868692..19868724,- | |||
|ontology_enrichment_celltype=CL:0000213!5.30e-23!57;CL:0000215!5.30e-23!57;CL:0000066!1.12e-22!254;CL:0002078!1.16e-19!44;CL:0000222!5.09e-19!119;CL:0002139!1.01e-18!24;CL:0000115!9.93e-17!35;CL:0002321!1.77e-16!248;CL:0000220!2.79e-16!246;CL:0000076!1.87e-15!62;CL:0000071!2.63e-14!18;CL:0002546!2.63e-14!18;CL:0000548!4.58e-14!679;CL:0000004!4.58e-14!679;CL:0000255!4.58e-14!679;CL:0000012!1.49e-13!682;CL:0000057!1.01e-10!75;CL:0000055!2.07e-10!180;CL:0000063!3.13e-08!578;CL:0000144!3.14e-08!625;CL:0000003!1.08e-07!722;CL:0000077!1.49e-07!19;CL:1000413!1.60e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.94e-32;24!CL:0000115;2.70e-25;36!CL:0000071;6.04e-24;18!CL:0002078;2.61e-20;45!CL:0000213;1.04e-18;58!CL:0000215;1.04e-18;58!CL:1000413;5.26e-12;9!CL:0002543;1.63e-09;6!CL:0002138;2.57e-09;6!CL:0000076;2.90e-09;63!CL:0002544;9.51e-09;6!CL:0000349;1.14e-08;19!CL:0000077;5.85e-08;19!CL:1000746;8.99e-07;7!CL:1000612;8.99e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.31e-35,58;CL:0000215,1.31e-35,58;CL:0002139,1.16e-31,24;CL:0002078,2.32e-31,45;CL:0000115,2.38e-30,36;CL:0000071,6.73e-24,18;CL:0002546,6.73e-24,18;CL:0000066,1.41e-17,253;CL:0000076,1.02e-16,63;CL:0000222,1.84e-16,121;CL:1000413,5.23e-12,9;CL:0002543,1.85e-09,6;CL:0005020,2.68e-09,6;CL:0002138,2.68e-09,6;CL:0005022,2.68e-09,6;CL:0002321,7.73e-09,250;CL:0000349,8.43e-09,19;CL:0002544,1.28e-08,6;CL:0000077,3.96e-08,19;CL:1000746,6.22e-07,7;CL:1000612,6.22e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;6.04e-24;18!CL:0005022;2.57e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000487!1.28e-14!22;UBERON:0006914!2.48e-14!25;UBERON:0001986!2.63e-14!18;UBERON:0004638!2.63e-14!18;UBERON:0004852!2.63e-14!18;UBERON:0002049!5.08e-09!79;UBERON:0007798!5.08e-09!79;UBERON:0005631!3.07e-08!14;UBERON:0000158!3.07e-08!14;UBERON:0000055!7.48e-08!69;UBERON:0003915!1.60e-07!9;UBERON:0004700!1.60e-07!9;UBERON:0001917!1.60e-07!9;UBERON:0000468!7.00e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.04e-24;18!UBERON:0001986;6.04e-24;18!UBERON:0004852;6.04e-24;18!UBERON:0000487;2.90e-23;22!UBERON:0006914;1.00e-21;25!UBERON:0000490;1.53e-13;33!UBERON:0003915;5.26e-12;9!UBERON:0004700;5.26e-12;9!UBERON:0001917;5.26e-12;9!UBERON:0001473;8.44e-09;8!UBERON:0004536;8.44e-09;8!UBERON:0006558;8.44e-09;8!UBERON:0001851;2.75e-07;15!UBERON:0000074;8.99e-07;7!UBERON:0001229;8.99e-07;7!UBERON:0000055;9.10e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.73e-24,18;UBERON:0001986,6.73e-24,18;UBERON:0004852,6.73e-24,18;UBERON:0000487,3.17e-23,22;UBERON:0006914,9.54e-22,25;UBERON:0003915,5.23e-12,9;UBERON:0004700,5.23e-12,9;UBERON:0001917,5.23e-12,9;UBERON:0000055,2.09e-10,68;UBERON:0002049,1.57e-09,78;UBERON:0007798,1.57e-09,78;UBERON:0005631,2.98e-09,14;UBERON:0000158,2.98e-09,14;UBERON:0001473,9.12e-09,8;UBERON:0004536,9.12e-09,8;UBERON:0006558,9.12e-09,8;UBERON:0003124,4.93e-08,7;UBERON:0001851,1.93e-07,15;UBERON:0010532,6.22e-07,7;UBERON:0000074,6.22e-07,7;UBERON:0001229,6.22e-07,7;UBERON:0001230,6.22e-07,7;UBERON:0003220,6.22e-07,7;UBERON:0005749,6.22e-07,7;UBERON:0004199,6.22e-07,7;UBERON:0004209,6.22e-07,7;UBERON:0004198,6.22e-07,7 | |||
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| |||
|short_description=p2@TXNRD2 | |||
}} |
Revision as of 11:00, 12 September 2013
Short description: | p2@TXNRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TXNRD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000485358_5end |
EntrezGene: | NA |
HGNC: | 18155 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.31e-35 | 58 |
barrier cell | 1.31e-35 | 58 |
endothelial cell of vascular tree | 1.16e-31 | 24 |
meso-epithelial cell | 2.32e-31 | 45 |
endothelial cell | 2.38e-30 | 36 |
blood vessel endothelial cell | 6.73e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.73e-24 | 18 |
epithelial cell | 1.41e-17 | 253 |
squamous epithelial cell | 1.02e-16 | 63 |
mesodermal cell | 1.84e-16 | 121 |
endothelial cell of artery | 5.23e-12 | 9 |
vein endothelial cell | 1.85e-09 | 6 |
lymphangioblast | 2.68e-09 | 6 |
endothelial cell of lymphatic vessel | 2.68e-09 | 6 |
vascular lymphangioblast | 2.68e-09 | 6 |
embryonic cell | 7.73e-09 | 250 |
extraembryonic cell | 8.43e-09 | 19 |
aortic endothelial cell | 1.28e-08 | 6 |
mesothelial cell | 3.96e-08 | 19 |
glomerular cell | 6.22e-07 | 7 |
kidney corpuscule cell | 6.22e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.73e-24 | 18 |
endothelium | 6.73e-24 | 18 |
cardiovascular system endothelium | 6.73e-24 | 18 |
simple squamous epithelium | 3.17e-23 | 22 |
squamous epithelium | 9.54e-22 | 25 |
endothelial tube | 5.23e-12 | 9 |
arterial system endothelium | 5.23e-12 | 9 |
endothelium of artery | 5.23e-12 | 9 |
vessel | 2.09e-10 | 68 |
vasculature | 1.57e-09 | 78 |
vascular system | 1.57e-09 | 78 |
extraembryonic membrane | 2.98e-09 | 14 |
membranous layer | 2.98e-09 | 14 |
lymphatic vessel | 9.12e-09 | 8 |
lymph vasculature | 9.12e-09 | 8 |
lymphatic part of lymphoid system | 9.12e-09 | 8 |
chorion | 4.93e-08 | 7 |
cortex | 1.93e-07 | 15 |
primitive nephron | 6.22e-07 | 7 |
renal glomerulus | 6.22e-07 | 7 |
renal corpuscle | 6.22e-07 | 7 |
glomerular capsule | 6.22e-07 | 7 |
metanephric mesenchyme | 6.22e-07 | 7 |
glomerular tuft | 6.22e-07 | 7 |
S-shaped body | 6.22e-07 | 7 |
renal vesicle | 6.22e-07 | 7 |
comma-shaped body | 6.22e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.