FFCP PHASE1:Hg19::chr21:45499584..45499588,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7109|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11868|TSSclassifier=N|UniProt=|association_with_transcript=-85bp_to_ENST00000461889_5end|coexpression_cluster_id=C1|description=CAGE_peak_4_at_TRAPPC10_5end|id=chr21:45499584..45499588,+|ontology_enrichment_celltype=CL:0000838!4.63e-08!52;CL:0000542!9.47e-08!53;CL:0000051!9.47e-08!53|ontology_enrichment_celltype_v019=CL:0002577;2.06e-10;3!CL:0000222;1.97e-08;1!CL:0002601;1.97e-08;1|ontology_enrichment_celltype_v019_2=CL:0002577,1.48e-10,3;CL:0002601,1.71e-08,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;4.64e-07;10|ontology_enrichment_disease_v019_2=DOID:0060058,5.60e-07,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000178;4.70e-23;15!UBERON:0000179;4.70e-23;15!UBERON:0000463;4.70e-23;15!UBERON:0002390;4.38e-13;32!UBERON:0002331;4.88e-12;10!UBERON:0000478;1.94e-10;24!UBERON:0001987;5.04e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.45e-23,15;UBERON:0000179,3.45e-23,15;UBERON:0000463,3.45e-23,15;UBERON:0002331,5.98e-12,10;UBERON:0000358,5.98e-12,10;UBERON:0000307,5.98e-12,10;UBERON:0000091,5.98e-12,10;UBERON:0000087,5.98e-12,10;UBERON:0007010,5.98e-12,10;UBERON:0007806,5.98e-12,10;UBERON:0008780,5.98e-12,10;UBERON:0005728,5.98e-12,10;UBERON:0000478,1.95e-10,24;UBERON:0001987,3.94e-08,4;UBERON:0004340,3.94e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.369363174230364,0,0,0,0.136874425072884,0,0.0764134057479513,0.328402357799783,0.236132343941038,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0,6.19737604642413,0.853015394924529,0,0.553995408531877,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,0,1.17447437874188,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,1.00311897234407,0,0,0,2.56244050835899,1.47302953737419,1.10766947291811,0,0.768547918354051,0.780356085359269,0.986627427622057,1.10540007114339,0,0.296573126324121,0.267540828089713,0,1.58633079776593,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0.383587685530591,1.44575660953827,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0.571994910780128,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0,0,0.161872944368132,0,0.204154171254893,0,0,1.18800285728205,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.37223371266318,0,0,0,0.0920498986422993,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0.112085143993527,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,1.21251028578504,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0.657779629937804,0,0,0.328014645699706,0,0.206082023295445,0,0.082509499920588,0,0,0,0.386682873168488,0,0,0,0.214840489736547,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,1.84820148105653,0,0.869932992075073,0,0,0,0,0.190630193923825,0.511795582622668,0,0.636406495851874,0,0.539617372749944,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811641507850816,0,0,0.286822704408103,0.0982490410131212,0.35667105148125,1.41904425628239,0,0,0,0.349934720244983,0.48111056362756,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0,2.02979043692868,1.52927441428475,0,1.42939065274673,0.411362273086194,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.635746315921515,0,0.652931232636591,0.141353071433941,0,0,0,0,4.74433805888995,2.84197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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7109 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11868 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-85bp_to_ENST00000461889_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_TRAPPC10_5end | |||
|id=chr21:45499584..45499588,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.63e-08!52;CL:0000542!9.47e-08!53;CL:0000051!9.47e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.06e-10;3!CL:0000222;1.97e-08;1!CL:0002601;1.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.48e-10,3;CL:0002601,1.71e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.64e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.60e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.70e-23;15!UBERON:0000179;4.70e-23;15!UBERON:0000463;4.70e-23;15!UBERON:0002390;4.38e-13;32!UBERON:0002331;4.88e-12;10!UBERON:0000478;1.94e-10;24!UBERON:0001987;5.04e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.45e-23,15;UBERON:0000179,3.45e-23,15;UBERON:0000463,3.45e-23,15;UBERON:0002331,5.98e-12,10;UBERON:0000358,5.98e-12,10;UBERON:0000307,5.98e-12,10;UBERON:0000091,5.98e-12,10;UBERON:0000087,5.98e-12,10;UBERON:0007010,5.98e-12,10;UBERON:0007806,5.98e-12,10;UBERON:0008780,5.98e-12,10;UBERON:0005728,5.98e-12,10;UBERON:0000478,1.95e-10,24;UBERON:0001987,3.94e-08,4;UBERON:0004340,3.94e-08,4 | |||
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| |||
|short_description=p4@TRAPPC10 | |||
}} |
Revision as of 10:38, 12 September 2013
Short description: | p4@TRAPPC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TRAPPC10_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -85bp_to_ENST00000461889_5end |
EntrezGene: | TRAPPC10 |
HGNC: | 11868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.48e-10 | 3 |
uterine smooth muscle cell | 1.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 3.45e-23 | 15 |
haemolymphatic fluid | 3.45e-23 | 15 |
organism substance | 3.45e-23 | 15 |
umbilical cord | 5.98e-12 | 10 |
blastocyst | 5.98e-12 | 10 |
blastula | 5.98e-12 | 10 |
bilaminar disc | 5.98e-12 | 10 |
inner cell mass | 5.98e-12 | 10 |
cleaving embryo | 5.98e-12 | 10 |
connecting stalk | 5.98e-12 | 10 |
inner cell mass derived epiblast | 5.98e-12 | 10 |
extraembryonic mesoderm | 5.98e-12 | 10 |
extraembryonic structure | 1.95e-10 | 24 |
placenta | 3.94e-08 | 4 |
allantois | 3.94e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.60e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.