FFCP PHASE1:Hg19::chr21:44441244..44441257,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5316|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9022|TSSclassifier=S|UniProt=|association_with_transcript=-3bp_to_ENST00000474336_5end|coexpression_cluster_id=C113|description=CAGE_peak_6_at_PKNOX1_5end|id=chr21:44441244..44441257,+|ontology_enrichment_celltype=CL:0000159!1.07e-27!2;CL:0000313!5.42e-15!1;CL:0000319!1.61e-14!1;CL:0002149!6.50e-10!6;CL:0002255!6.50e-10!6;CL:0000242!8.04e-08!2|ontology_enrichment_celltype_v019=CL:0000313;9.91e-41;1!CL:0000159;3.81e-21;2!CL:0002149;6.78e-08;6!CL:0002255;6.78e-08;6|ontology_enrichment_celltype_v019_2=CL:0000313,9.91e-41,1;CL:0000159,3.81e-21,2;CL:0002149,7.25e-08,6;CL:0002255,7.25e-08,6|ontology_enrichment_development_v019=UBERON:0007123;1.44e-32;5|ontology_enrichment_disease=DOID:2152!5.42e-15!1;DOID:3030!1.61e-14!1;DOID:299!2.54e-13!25;DOID:3001!6.50e-10!6;DOID:120!3.38e-08!27;DOID:4468!7.52e-08!2;DOID:193!1.20e-07!29|ontology_enrichment_disease_v019=DOID:2152;9.91e-41;1!DOID:3001;6.78e-08;6!DOID:299;2.35e-07;25!DOID:120;7.03e-07;27|ontology_enrichment_disease_v019_2=DOID:2152,9.91e-41,1;DOID:3001,7.25e-08,6;DOID:299,2.43e-07,25;DOID:120,7.24e-07,27|ontology_enrichment_uberon=UBERON:0000341!1.40e-27!2;UBERON:0002046!1.30e-24!5;UBERON:0004117!1.30e-24!5;UBERON:0007689!1.30e-24!5;UBERON:0007123!1.30e-24!5;UBERON:0003091!1.30e-24!5;UBERON:0004911!5.42e-15!1;UBERON:0000998!1.23e-14!1;UBERON:0006868!1.23e-14!1;UBERON:0006834!2.75e-14!1;UBERON:0009722!1.52e-11!11;UBERON:0007690!1.52e-11!11;UBERON:0004175!9.14e-09!25;UBERON:0008814!1.30e-08!15;UBERON:0004909!3.82e-08!2;UBERON:0003127!6.15e-08!2;UBERON:0003133!6.60e-07!48|ontology_enrichment_uberon_v019=UBERON:0004911;9.91e-41;1!UBERON:0002046;1.44e-32;5!UBERON:0004909;3.81e-21;2!UBERON:0000341;5.69e-21;2!UBERON:0000974;6.78e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.91e-41,1;UBERON:0002046,1.44e-32,5;UBERON:0004117,1.44e-32,5;UBERON:0007689,1.44e-32,5;UBERON:0007123,1.44e-32,5;UBERON:0003091,1.44e-32,5;UBERON:0004909,3.81e-21,2;UBERON:0000341,4.66e-21,2;UBERON:0009722,1.88e-15,11;UBERON:0007690,1.88e-15,11;UBERON:0008814,7.42e-10,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0.520679215005393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,4.3623618401139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,1.66645102024618,0,0,0,5.21906697880952,1.61693751166575,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p6@PKNOX1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9022 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000474336_5end | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_6_at_PKNOX1_5end | |||
|id=chr21:44441244..44441257,+ | |||
|ontology_enrichment_celltype=CL:0000159!1.07e-27!2;CL:0000313!5.42e-15!1;CL:0000319!1.61e-14!1;CL:0002149!6.50e-10!6;CL:0002255!6.50e-10!6;CL:0000242!8.04e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000313;9.91e-41;1!CL:0000159;3.81e-21;2!CL:0002149;6.78e-08;6!CL:0002255;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.91e-41,1;CL:0000159,3.81e-21,2;CL:0002149,7.25e-08,6;CL:0002255,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.44e-32;5 | |||
|ontology_enrichment_disease=DOID:2152!5.42e-15!1;DOID:3030!1.61e-14!1;DOID:299!2.54e-13!25;DOID:3001!6.50e-10!6;DOID:120!3.38e-08!27;DOID:4468!7.52e-08!2;DOID:193!1.20e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2152;9.91e-41;1!DOID:3001;6.78e-08;6!DOID:299;2.35e-07;25!DOID:120;7.03e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.91e-41,1;DOID:3001,7.25e-08,6;DOID:299,2.43e-07,25;DOID:120,7.24e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000341!1.40e-27!2;UBERON:0002046!1.30e-24!5;UBERON:0004117!1.30e-24!5;UBERON:0007689!1.30e-24!5;UBERON:0007123!1.30e-24!5;UBERON:0003091!1.30e-24!5;UBERON:0004911!5.42e-15!1;UBERON:0000998!1.23e-14!1;UBERON:0006868!1.23e-14!1;UBERON:0006834!2.75e-14!1;UBERON:0009722!1.52e-11!11;UBERON:0007690!1.52e-11!11;UBERON:0004175!9.14e-09!25;UBERON:0008814!1.30e-08!15;UBERON:0004909!3.82e-08!2;UBERON:0003127!6.15e-08!2;UBERON:0003133!6.60e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;9.91e-41;1!UBERON:0002046;1.44e-32;5!UBERON:0004909;3.81e-21;2!UBERON:0000341;5.69e-21;2!UBERON:0000974;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.91e-41,1;UBERON:0002046,1.44e-32,5;UBERON:0004117,1.44e-32,5;UBERON:0007689,1.44e-32,5;UBERON:0007123,1.44e-32,5;UBERON:0003091,1.44e-32,5;UBERON:0004909,3.81e-21,2;UBERON:0000341,4.66e-21,2;UBERON:0009722,1.88e-15,11;UBERON:0007690,1.88e-15,11;UBERON:0008814,7.42e-10,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0.520679215005393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,4.3623618401139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,1.66645102024618,0,0,0,5.21906697880952,1.61693751166575,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@PKNOX1 | |||
}} |
Revision as of 10:34, 12 September 2013
Short description: | p6@PKNOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PKNOX1_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | -3bp_to_ENST00000474336_5end |
EntrezGene: | PKNOX1 |
HGNC: | 9022 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.91e-41 | 1 |
seromucus secreting cell | 3.81e-21 | 2 |
epithelial cell of uterus | 7.25e-08 | 6 |
stromal cell of endometrium | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 9.91e-41 | 1 |
thyroid gland | 1.44e-32 | 5 |
pharyngeal pouch | 1.44e-32 | 5 |
thyroid diverticulum | 1.44e-32 | 5 |
pharyngeal pouch 2 | 1.44e-32 | 5 |
thyroid primordium | 1.44e-32 | 5 |
epithelium of gonad | 3.81e-21 | 2 |
throat | 4.66e-21 | 2 |
entire pharyngeal arch endoderm | 1.88e-15 | 11 |
early pharyngeal endoderm | 1.88e-15 | 11 |
pharyngeal arch system | 7.42e-10 | 18 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.91e-41 | 1 |
female reproductive endometrioid cancer | 7.25e-08 | 6 |
adenocarcinoma | 2.43e-07 | 25 |
female reproductive organ cancer | 7.24e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.