FFCP PHASE1:Hg19::chr21:43541262..43541275,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89766|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=12560|TSSclassifier=S|UniProt=E9PGN3|association_with_transcript=0bp_to_ENST00000434156_5end|description=CAGE_peak_3_at_UMODL1_5end|id=chr21:43541262..43541275,+|ontology_enrichment_celltype=CL:0000039!6.76e-20!7;CL:0000586!6.76e-20!7;CL:0000817!2.54e-12!3;CL:0001024!6.31e-10!1;CL:0000819!6.88e-10!1;CL:0000945!1.38e-08!24;CL:0000826!1.38e-08!24;CL:0002322!2.30e-07!5|ontology_enrichment_celltype_v019=CL:0000039;8.05e-37;7!CL:0000586;8.05e-37;7!CL:0000037;2.73e-29;1!CL:0001024;2.73e-29;1|ontology_enrichment_celltype_v019_2=CL:0000039,7.12e-37,7;CL:0000586,7.12e-37,7;CL:0001024,4.20e-29,1|ontology_enrichment_development_v019=UBERON:0009117;4.66e-26;10!UBERON:0005564;4.66e-26;10|ontology_enrichment_disease=DOID:3095!4.46e-18!22;DOID:2994!4.46e-18!22;DOID:0060073!6.88e-10!1;DOID:8675!6.88e-10!1;DOID:12603!1.25e-09!1;DOID:2531!1.45e-09!51;DOID:0060083!1.45e-09!51;DOID:0060058!3.55e-08!10|ontology_enrichment_disease_v019=DOID:3095;2.74e-12;22!DOID:2994;2.74e-12;22|ontology_enrichment_disease_v019_2=DOID:3095,2.64e-12,22;DOID:2994,2.64e-12,22|ontology_enrichment_uberon=UBERON:0000473!1.93e-17!8;UBERON:0003135!9.70e-13!11;UBERON:0000991!9.88e-07!21;UBERON:0009196!9.88e-07!21;UBERON:0009117!9.88e-07!21;UBERON:0005564!9.88e-07!21|ontology_enrichment_uberon_v019=UBERON:0000473;2.44e-32;8!UBERON:0003135;9.02e-24;11!UBERON:0000991;7.73e-13;21!UBERON:0003101;2.74e-12;22!UBERON:0000079;2.74e-12;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.19e-32,8;UBERON:0003135,8.35e-24,11;UBERON:0000991,7.43e-13,21;UBERON:0009196,7.43e-13,21;UBERON:0009117,7.43e-13,21;UBERON:0005564,7.43e-13,21;UBERON:0004176,2.64e-12,22;UBERON:0003101,2.64e-12,22;UBERON:0000079,2.64e-12,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.284338464974843,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.865615277858669,0,0,0,0,2.96343015813436,0,0,6.16233633389619,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58330377895165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.61193297845189,1.60330443159336,4.5028500772074,1.50424523575425,0,0,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@UMODL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=89766 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12560 | |||
|TSSclassifier=S | |||
|UniProt=E9PGN3 | |||
|association_with_transcript=0bp_to_ENST00000434156_5end | |||
|description=CAGE_peak_3_at_UMODL1_5end | |||
|id=chr21:43541262..43541275,+ | |||
|ontology_enrichment_celltype=CL:0000039!6.76e-20!7;CL:0000586!6.76e-20!7;CL:0000817!2.54e-12!3;CL:0001024!6.31e-10!1;CL:0000819!6.88e-10!1;CL:0000945!1.38e-08!24;CL:0000826!1.38e-08!24;CL:0002322!2.30e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.05e-37;7!CL:0000586;8.05e-37;7!CL:0000037;2.73e-29;1!CL:0001024;2.73e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.12e-37,7;CL:0000586,7.12e-37,7;CL:0001024,4.20e-29,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.66e-26;10!UBERON:0005564;4.66e-26;10 | |||
|ontology_enrichment_disease=DOID:3095!4.46e-18!22;DOID:2994!4.46e-18!22;DOID:0060073!6.88e-10!1;DOID:8675!6.88e-10!1;DOID:12603!1.25e-09!1;DOID:2531!1.45e-09!51;DOID:0060083!1.45e-09!51;DOID:0060058!3.55e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.74e-12;22!DOID:2994;2.74e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.64e-12,22;DOID:2994,2.64e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.93e-17!8;UBERON:0003135!9.70e-13!11;UBERON:0000991!9.88e-07!21;UBERON:0009196!9.88e-07!21;UBERON:0009117!9.88e-07!21;UBERON:0005564!9.88e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.44e-32;8!UBERON:0003135;9.02e-24;11!UBERON:0000991;7.73e-13;21!UBERON:0003101;2.74e-12;22!UBERON:0000079;2.74e-12;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.19e-32,8;UBERON:0003135,8.35e-24,11;UBERON:0000991,7.43e-13,21;UBERON:0009196,7.43e-13,21;UBERON:0009117,7.43e-13,21;UBERON:0005564,7.43e-13,21;UBERON:0004176,2.64e-12,22;UBERON:0003101,2.64e-12,22;UBERON:0000079,2.64e-12,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.284338464974843,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.865615277858669,0,0,0,0,2.96343015813436,0,0,6.16233633389619,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58330377895165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.61193297845189,1.60330443159336,4.5028500772074,1.50424523575425,0,0,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@UMODL1 | |||
}} |
Revision as of 10:30, 12 September 2013
Short description: | p3@UMODL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_UMODL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000434156_5end |
EntrezGene: | UMODL1 |
HGNC: | 12560 |
UniProt: | E9PGN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.12e-37 | 7 |
germ cell | 7.12e-37 | 7 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.20e-29 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 2.19e-32 | 8 |
male reproductive organ | 8.35e-24 | 11 |
gonad | 7.43e-13 | 21 |
indifferent external genitalia | 7.43e-13 | 21 |
indifferent gonad | 7.43e-13 | 21 |
gonad primordium | 7.43e-13 | 21 |
external genitalia | 2.64e-12 | 22 |
male organism | 2.64e-12 | 22 |
male reproductive system | 2.64e-12 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.64e-12 | 22 |
germ cell cancer | 2.64e-12 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.