FFCP PHASE1:Hg19::chr20:57572713..57572734,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1522|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=2547|TSSclassifier=N|UniProt=|association_with_transcript=316bp_to_ENST00000503833,uc010gjt.1_5end|coexpression_cluster_id=C71|description=CAGE_peak_4_at_CTSZ_5end|id=chr20:57572713..57572734,-|ontology_enrichment_celltype=CL:0002009!1.70e-13!65;CL:0002194!6.90e-13!63;CL:0000576!6.90e-13!63;CL:0000040!6.90e-13!63;CL:0000559!6.90e-13!63;CL:0000839!1.05e-10!70;CL:0000557!1.30e-10!71;CL:0000766!6.40e-10!76;CL:0000860!1.64e-07!45;CL:0002057!4.04e-07!42|ontology_enrichment_celltype_v019=CL:0000235;4.60e-11;6!CL:0000473;6.77e-10;39!CL:0000234;6.77e-10;39|ontology_enrichment_celltype_v019_2=CL:0002009,7.99e-16,61;CL:0002194,2.78e-15,59;CL:0000576,2.78e-15,59;CL:0000040,2.78e-15,59;CL:0000559,2.78e-15,59;CL:0000766,4.20e-14,72;CL:0000557,1.29e-13,67;CL:0000839,9.19e-13,66;CL:0000473,9.81e-12,48;CL:0000234,9.81e-12,48;CL:0000235,7.86e-11,6;CL:0000763,1.61e-08,108;CL:0000049,1.61e-08,108;CL:0002320,1.77e-07,361;CL:0000134,3.55e-07,354|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!2.72e-09!448;UBERON:0004120!2.72e-09!448;UBERON:0006603!2.72e-09!448;UBERON:0002371!8.02e-09!80;UBERON:0002204!8.23e-08!167;UBERON:0002193!1.51e-07!112;UBERON:0003081!3.60e-07!216;UBERON:0004765!3.78e-07!101;UBERON:0001434!3.78e-07!101;UBERON:0002405!7.84e-07!115;UBERON:0001474!9.50e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.38e-12,76;UBERON:0001434,2.26e-11,100;UBERON:0002405,2.72e-11,93;UBERON:0002193,9.60e-11,108;UBERON:0001474,2.60e-10,82;UBERON:0004765,3.68e-10,90;UBERON:0002390,1.53e-09,98;UBERON:0003061,1.53e-09,98;UBERON:0002204,1.84e-07,167;UBERON:0002384,3.46e-07,371|phase1_expression=0,1.07050261945492,0,0,0.893922188854576,1.74467704820074,2.53299878168311,0,0,0,0.697801167972428,0,0,0,1.98838425436749,0.672325146451775,0,0.730310090387373,0.975865597581014,0,0.408001382488506,0,0,0.273748850145768,0.376627918784408,0.840547463227464,0.410502947249729,0.393553906568396,1.18009283054671,0,0.309632246632152,0.919421224478927,0.6024118375565,1.10926203050036,0,0.142169232487422,0,0.553995408531877,1.20326668482085,1.30206522429511,5.15005590751826,2.26725566213286,3.09090681161024,1.16318591023652,0.377875943688809,0,0.697287110717054,0.822335776043652,0.309706370895104,3.45230870786581,0.768482119587302,1.18241114944293,1.37898272294647,1.29096936716765,0,1.69418105588344,0,0.224723484445085,1.83650335422542,0.320929027076094,2.55734850319616,3.29851300186716,0.997318288108159,1.70489900213078,0.290209238628584,1.13477044938228,0.622822248995575,1.7587406567972,1.0429658368404,1.3031330682307,1.81619850790011,0.368277635987565,0,1.05627643155971,0.637812899895131,0.209658645508376,0.336985893439485,0.901061357049038,0.16072558669708,0,0.39783335439818,0,0,0,0.889509253863555,0,0.800791974072025,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,1.17903228824749,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0.973269740605272,0.283604451492204,0.886917589850256,0.43917392846563,0.196468613246569,0.364295288292542,0,5.51730569212962,4.87563264437948,29.2507513141503,0.476981248610684,1.14398982156026,0,0,0.860234595106124,0.694281003215189,0,0.419499436209906,1.92582629358047,0.626984899610432,0.258416759169329,0,0.33472061276467,0.805658634218294,0.760272105718513,1.46437234528902,0.735326160691737,4.86085168729056,0.0892997282840798,0.22452937262617,0,0,0,0.732806975721629,0,0,0,0,0.12663051166458,0.132409180813219,1.14734648299525,0.354668382198357,0.560677600142307,0,3.7000132262574,0,1.34710672069688,0.326923806226917,0.302714855289863,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0.469737994575059,0.485618833104395,0.280901613404497,0,0.61417158655884,0.413303124703062,1.18800285728205,1.97813543422845,0,2.15585442544872,0.168336113954066,0.125118519871964,0,1.31693286264251,1.22595118319608,0.901428353439581,0.226864366320042,0.538168907066586,0.640672166455702,0.211931901159562,2.40072876867522,0.721367704669072,0.257640540045629,0.18611685633159,0,0.389748020644795,0,0,0.969876340912871,0,0.806016785821122,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,5.78916844373597,0,1.39310378409594,2.16563844500876,1.18306800039844,0.842923450390509,0.964044119533928,1.65440959098591,1.96091499683166,0.474541238222193,1.21348177344148,0.588664395376038,1.53898862778556,0.738155454624648,0,0,0,5.07020139287323,1.96565443335525,0.590789906681404,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,0,0,1.29929802984966,0.925971025153221,1.52203321787679,0,0,9.84868024349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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1522 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2547 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=316bp_to_ENST00000503833,uc010gjt.1_5end | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_4_at_CTSZ_5end | |||
|id=chr20:57572713..57572734,- | |||
|ontology_enrichment_celltype=CL:0002009!1.70e-13!65;CL:0002194!6.90e-13!63;CL:0000576!6.90e-13!63;CL:0000040!6.90e-13!63;CL:0000559!6.90e-13!63;CL:0000839!1.05e-10!70;CL:0000557!1.30e-10!71;CL:0000766!6.40e-10!76;CL:0000860!1.64e-07!45;CL:0002057!4.04e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.60e-11;6!CL:0000473;6.77e-10;39!CL:0000234;6.77e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,7.99e-16,61;CL:0002194,2.78e-15,59;CL:0000576,2.78e-15,59;CL:0000040,2.78e-15,59;CL:0000559,2.78e-15,59;CL:0000766,4.20e-14,72;CL:0000557,1.29e-13,67;CL:0000839,9.19e-13,66;CL:0000473,9.81e-12,48;CL:0000234,9.81e-12,48;CL:0000235,7.86e-11,6;CL:0000763,1.61e-08,108;CL:0000049,1.61e-08,108;CL:0002320,1.77e-07,361;CL:0000134,3.55e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.72e-09!448;UBERON:0004120!2.72e-09!448;UBERON:0006603!2.72e-09!448;UBERON:0002371!8.02e-09!80;UBERON:0002204!8.23e-08!167;UBERON:0002193!1.51e-07!112;UBERON:0003081!3.60e-07!216;UBERON:0004765!3.78e-07!101;UBERON:0001434!3.78e-07!101;UBERON:0002405!7.84e-07!115;UBERON:0001474!9.50e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.38e-12,76;UBERON:0001434,2.26e-11,100;UBERON:0002405,2.72e-11,93;UBERON:0002193,9.60e-11,108;UBERON:0001474,2.60e-10,82;UBERON:0004765,3.68e-10,90;UBERON:0002390,1.53e-09,98;UBERON:0003061,1.53e-09,98;UBERON:0002204,1.84e-07,167;UBERON:0002384,3.46e-07,371 | |||
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| |||
|short_description=p4@CTSZ | |||
}} |
Revision as of 09:23, 12 September 2013
Short description: | p4@CTSZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CTSZ_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 316bp_to_ENST00000503833, uc010gjt.1_5end |
EntrezGene: | CTSZ |
HGNC: | 2547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 7.99e-16 | 61 |
monopoietic cell | 2.78e-15 | 59 |
monocyte | 2.78e-15 | 59 |
monoblast | 2.78e-15 | 59 |
promonocyte | 2.78e-15 | 59 |
myeloid leukocyte | 4.20e-14 | 72 |
granulocyte monocyte progenitor cell | 1.29e-13 | 67 |
myeloid lineage restricted progenitor cell | 9.19e-13 | 66 |
defensive cell | 9.81e-12 | 48 |
phagocyte | 9.81e-12 | 48 |
macrophage | 7.86e-11 | 6 |
myeloid cell | 1.61e-08 | 108 |
common myeloid progenitor | 1.61e-08 | 108 |
connective tissue cell | 1.77e-07 | 361 |
mesenchymal cell | 3.55e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.38e-12 | 76 |
skeletal system | 2.26e-11 | 100 |
immune system | 2.72e-11 | 93 |
hemolymphoid system | 9.60e-11 | 108 |
bone element | 2.60e-10 | 82 |
skeletal element | 3.68e-10 | 90 |
hematopoietic system | 1.53e-09 | 98 |
blood island | 1.53e-09 | 98 |
musculoskeletal system | 1.84e-07 | 167 |
connective tissue | 3.46e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.