FFCP PHASE1:Hg19::chr20:44538665..44538730,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5360|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=9093|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_AF052157_5end|coexpression_cluster_id=C132|description=CAGE_peak_4_at_PLTP_5end|id=chr20:44538665..44538730,-|ontology_enrichment_celltype=CL:0000763!1.46e-07!112;CL:0000049!1.46e-07!112|ontology_enrichment_celltype_v019=CL:0000235;1.21e-15;6!CL:0000875;1.91e-12;3!CL:0002396;1.91e-12;3!CL:0002575;3.15e-09;2!CL:0000763;4.00e-08;100|ontology_enrichment_celltype_v019_2=CL:0000763,6.97e-25,108;CL:0000049,6.97e-25,108;CL:0002194,1.77e-16,59;CL:0000576,1.77e-16,59;CL:0000040,1.77e-16,59;CL:0000559,1.77e-16,59;CL:0000988,6.22e-16,177;CL:0000235,8.23e-16,6;CL:0002009,8.30e-16,61;CL:0002393,5.27e-15,9;CL:0002397,5.27e-15,9;CL:0000037,1.36e-14,168;CL:0002032,2.40e-14,161;CL:0000837,2.40e-14,161;CL:0000839,2.64e-14,66;CL:0000557,4.95e-14,67;CL:0000766,8.87e-13,72;CL:0000875,1.13e-12,3;CL:0002396,1.13e-12,3;CL:0002320,1.50e-09,361;CL:0002575,3.71e-09,2;CL:0000134,2.16e-08,354;CL:0000473,1.89e-07,48;CL:0000234,1.89e-07,48;CL:0000219,6.85e-07,386|ontology_enrichment_development_v019=CL:0000049;7.73e-10;108|ontology_enrichment_disease=DOID:8692!3.19e-09!31|ontology_enrichment_disease_v019=DOID:8692;2.21e-25;31!DOID:1240;7.73e-16;39!DOID:2531;2.78e-09;51!DOID:0060083;2.78e-09;51|ontology_enrichment_disease_v019_2=DOID:8692,1.05e-25,31;DOID:1240,1.12e-19,39;DOID:2531,3.40e-14,51;DOID:0060083,3.40e-14,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.16e-13,76;UBERON:0001474,4.24e-12,82;UBERON:0004765,1.20e-10,90;UBERON:0002405,3.62e-10,93;UBERON:0002390,1.95e-09,98;UBERON:0003061,1.95e-09,98;UBERON:0001434,3.65e-09,100;UBERON:0002384,4.82e-09,371;UBERON:0002193,3.52e-08,108|phase1_expression=0,0.856402095563933,0.563817616383885,0,1.34088328328186,0.872338524100369,0,0,1.30592814099919,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0.786728553697808,0,0.154816123316076,0,1.50602959389125,0.369754010166788,0,0,1.17440175733939,0,0,0.434021741431704,0.895661896959697,1.29557466407592,2.57575567634187,0,0.377875943688809,0.727752183563449,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,1.05627643155971,1.4882300997553,2.72556239160889,0.44931452458598,0.150176892841506,0,3.42015292489498,1.79025009479181,3.65328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,0,0.289693037921647,0,0,0,0,0,0.261958150995425,1.09288586487763,0,1.29818957461873,1.0447784237956,0.664789802594326,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0,1.51357427644931,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0,0.323292113637624,0,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.301586917234893,0,0,1.03993478527958,0,0.115930404975077,0,0.433099343283221,0,0,0,0,0.246217006087397,1.8720341211139,1.63494278517601,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0.258543431515556,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,1.2162378064119,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0.49076596687656,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.173767228936166,4.11182430671755,3.0882908142977,0,0.215714200818617,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0,0.40101294060657,0.276242966807689,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.515205058238611,0,0,0,0,0,0.193341436584244,0,0,0.275673144969061,0.107420244868274,0,0,0,0.165284915360978,0,0,0.4046311234222,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.571890581771475,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0,0,0.578775534266688,1.31178950409327,0.202910376962704,0,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.320472213382419,1.92495971052672,0,0,0,0,0,0,0,0,1.29848776109822,0.280797178113459,0.228234679033192,4.54371697741767,2.50634477090067,0.338583555603207,0.1605880751037,2.21979677910152,35.3452377282971,16.1447512035209,31.3385579594627,40.4853755285273,42.5465311365367,18.3664809677918,1.11362469558097,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0.123084805461069,0,0,0,1.02314474045374,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.120596438625408,0,0,0,0.219385397153973,0,0.139423744278603,0.461701551022782,0,0,0,0.434589487688032,0,0.0915975934018623,1.5991043280559,0,0,0,4.51191321234361,3.52912561771931,4.6990044353236,0.189753732724185,0.158936578980379,0,0,0.282706142867882,0.216388639742091,0,0.442287822516696,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0.485560759068186,0,0,0,1.32691817219825,0,0,0,0,0,0,0.569219092059585,0,0,0.293977192243133,0.0870592065804026,0.698906672968121,0.171986032471617,0,0,0,0.290967049465258,0.441280633457501,0,0,0.19871461170299,0.0633107959558787,0,0,0,0.599428828746391,0,0,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0.858452096273142,0.223171457441873,0.134366944973453,0,0,3.30889365690339,2.96697090172199,4.17901971895946,0,0,0,0.272406812223151,0.482259445395058,0.275078873194468,0,0.2249738915515,0,0.303747783290123,0,0.0788057072991982,0.314727528809989,0,0.537862017998534,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0.387848869084652,0.26446520348538,0,0.704815022316672,0.854299300541557,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0,1.14681839138014,0,0.124192805882767,0.138348634936231,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0.457680136793847,0,0,0.147855149989634,0,1.34940933649081,0.155262956876259,0,0,0,0.150257608997218,0.761610424337591,0,0,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0.489473409012935,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0.327130788511688,0,0,0,0.19998739585493,10.4557895100258,0,0,0,0,0,0,0,0.629063767423586,0.109209638192014,0.169732529954025,0,0.371807292777007,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0.781514011233092,0.261906694481422,0,0,0.0675375846183947,0,0,0,0,0,0,0.703484977438482,0.383287282918786,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0.39246546425257,0.314231179832004,0.280272163313789,0,0,0,0.500335809236594,0,0,0,0,0.207216164163037,0.85359238546975,0,0.430227358820278,0,0,0.846774100381858,0.22910686854405,0,0,0.223710863595585,0,0,0,0.307988420568741,0,0,0,0.198950775161368,0.118920090777569,0,0.219881033490858,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.588925401344836,0,0,0.169927114687817,0.281951753939561,0.45120521581504,0,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0.371995018166751,0,0,0.378499274505237,0.327796715891087,0.253397002022874,0.101988829741982,0,0,0.50141507858475,0.530450887527676,0,0,0,0.639701945702943,0.23806443146374,0.581300188524055,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0,0,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0.603821380773079,0|short_description=p4@PLTP}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5360 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9093 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AF052157_5end | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_4_at_PLTP_5end | |||
|id=chr20:44538665..44538730,- | |||
|ontology_enrichment_celltype=CL:0000763!1.46e-07!112;CL:0000049!1.46e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.21e-15;6!CL:0000875;1.91e-12;3!CL:0002396;1.91e-12;3!CL:0002575;3.15e-09;2!CL:0000763;4.00e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.97e-25,108;CL:0000049,6.97e-25,108;CL:0002194,1.77e-16,59;CL:0000576,1.77e-16,59;CL:0000040,1.77e-16,59;CL:0000559,1.77e-16,59;CL:0000988,6.22e-16,177;CL:0000235,8.23e-16,6;CL:0002009,8.30e-16,61;CL:0002393,5.27e-15,9;CL:0002397,5.27e-15,9;CL:0000037,1.36e-14,168;CL:0002032,2.40e-14,161;CL:0000837,2.40e-14,161;CL:0000839,2.64e-14,66;CL:0000557,4.95e-14,67;CL:0000766,8.87e-13,72;CL:0000875,1.13e-12,3;CL:0002396,1.13e-12,3;CL:0002320,1.50e-09,361;CL:0002575,3.71e-09,2;CL:0000134,2.16e-08,354;CL:0000473,1.89e-07,48;CL:0000234,1.89e-07,48;CL:0000219,6.85e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;7.73e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!3.19e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.21e-25;31!DOID:1240;7.73e-16;39!DOID:2531;2.78e-09;51!DOID:0060083;2.78e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.05e-25,31;DOID:1240,1.12e-19,39;DOID:2531,3.40e-14,51;DOID:0060083,3.40e-14,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.16e-13,76;UBERON:0001474,4.24e-12,82;UBERON:0004765,1.20e-10,90;UBERON:0002405,3.62e-10,93;UBERON:0002390,1.95e-09,98;UBERON:0003061,1.95e-09,98;UBERON:0001434,3.65e-09,100;UBERON:0002384,4.82e-09,371;UBERON:0002193,3.52e-08,108 | |||
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| |||
|short_description=p4@PLTP | |||
}} |
Revision as of 08:45, 12 September 2013
Short description: | p4@PLTP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PLTP_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | 0bp_to_AF052157_5end |
EntrezGene: | PLTP |
HGNC: | 9093 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.97e-25 | 108 |
common myeloid progenitor | 6.97e-25 | 108 |
monopoietic cell | 1.77e-16 | 59 |
monocyte | 1.77e-16 | 59 |
monoblast | 1.77e-16 | 59 |
promonocyte | 1.77e-16 | 59 |
hematopoietic cell | 6.22e-16 | 177 |
macrophage | 8.23e-16 | 6 |
macrophage dendritic cell progenitor | 8.30e-16 | 61 |
intermediate monocyte | 5.27e-15 | 9 |
CD14-positive, CD16-positive monocyte | 5.27e-15 | 9 |
hematopoietic stem cell | 1.36e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.40e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.40e-14 | 161 |
myeloid lineage restricted progenitor cell | 2.64e-14 | 66 |
granulocyte monocyte progenitor cell | 4.95e-14 | 67 |
myeloid leukocyte | 8.87e-13 | 72 |
non-classical monocyte | 1.13e-12 | 3 |
CD14-low, CD16-positive monocyte | 1.13e-12 | 3 |
connective tissue cell | 1.50e-09 | 361 |
central nervous system pericyte | 3.71e-09 | 2 |
mesenchymal cell | 2.16e-08 | 354 |
defensive cell | 1.89e-07 | 48 |
phagocyte | 1.89e-07 | 48 |
motile cell | 6.85e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.16e-13 | 76 |
bone element | 4.24e-12 | 82 |
skeletal element | 1.20e-10 | 90 |
immune system | 3.62e-10 | 93 |
hematopoietic system | 1.95e-09 | 98 |
blood island | 1.95e-09 | 98 |
skeletal system | 3.65e-09 | 100 |
connective tissue | 4.82e-09 | 371 |
hemolymphoid system | 3.52e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.05e-25 | 31 |
leukemia | 1.12e-19 | 39 |
hematologic cancer | 3.40e-14 | 51 |
immune system cancer | 3.40e-14 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.