FFCP PHASE1:Hg19::chr20:3295706..3295717,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C458|description=CAGE_peak_at_chr20:3295706..3295717,-|id=chr20:3295706..3295717,-|ontology_enrichment_celltype=CL:0000128!5.51e-12!7;CL:0000126!5.51e-12!7;CL:0000127!5.51e-12!7;CL:0002453!5.51e-12!7;CL:0002623!1.74e-11!3;CL:0002605!3.64e-11!3;CL:0000622!5.16e-07!5|ontology_enrichment_celltype_v019=CL:0002623;4.68e-85;3!CL:0000622;1.78e-51;5!CL:0000154;4.53e-43;6!CL:0000150;4.88e-29;9!CL:0002251;1.59e-13;20!CL:0000244;2.35e-08;4!CL:0000731;2.35e-08;4!CL:0000151;2.37e-08;36|ontology_enrichment_celltype_v019_2=CL:0002623,3.04e-85,3;CL:0000622,1.37e-51,5;CL:0000154,3.65e-43,6;CL:0000150,4.23e-29,9;CL:0002251,1.49e-13,20;CL:0000244,2.26e-08,4;CL:0000731,2.26e-08,4;CL:0000151,7.77e-08,36;CL:0002076,8.36e-07,42|ontology_enrichment_development_v019=UBERON:0006215;1.04e-10;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002616!1.58e-15!59;UBERON:0001017!2.87e-15!82;UBERON:0001049!1.79e-14!57;UBERON:0005068!1.79e-14!57;UBERON:0006241!1.79e-14!57;UBERON:0007135!1.79e-14!57;UBERON:0005743!2.67e-14!86;UBERON:0000955!5.80e-14!69;UBERON:0006238!5.80e-14!69;UBERON:0000073!2.04e-12!94;UBERON:0001016!2.04e-12!94;UBERON:0000033!2.02e-10!123;UBERON:0003075!2.19e-10!86;UBERON:0007284!2.19e-10!86;UBERON:0000988!4.11e-10!3;UBERON:0002346!1.03e-09!90;UBERON:0000153!1.17e-09!129;UBERON:0007811!1.17e-09!129;UBERON:0002780!1.53e-09!41;UBERON:0001890!1.53e-09!41;UBERON:0006240!1.53e-09!41;UBERON:0003080!2.97e-09!42;UBERON:0004121!5.73e-09!169;UBERON:0004733!8.68e-09!12;UBERON:0002028!8.68e-09!12;UBERON:0007277!8.68e-09!12;UBERON:0002020!9.81e-09!34;UBERON:0003528!9.81e-09!34;UBERON:0002680!1.18e-08!9;UBERON:0001895!1.18e-08!9;UBERON:0010092!1.18e-08!9;UBERON:0000924!1.32e-08!173;UBERON:0006601!1.32e-08!173;UBERON:0001893!1.81e-08!34;UBERON:0004732!4.64e-08!13;UBERON:0001869!1.44e-07!32;UBERON:0002148!1.61e-07!2;UBERON:0009662!1.61e-07!2;UBERON:0007023!2.02e-07!115;UBERON:0002791!2.76e-07!33;UBERON:0003076!6.79e-07!15;UBERON:0003057!6.79e-07!15|ontology_enrichment_uberon_v019=UBERON:0001044;4.53e-43;6!UBERON:0003293;4.53e-43;6!UBERON:0003294;4.53e-43;6!UBERON:0010047;4.53e-43;6!UBERON:0003408;4.53e-43;6!UBERON:0000167;4.53e-43;6!UBERON:0001041;5.56e-19;14!UBERON:0000161;3.38e-14;19!UBERON:0000166;3.38e-14;19!UBERON:0000165;7.24e-10;28!UBERON:0002365;2.97e-09;31!UBERON:0002330;2.97e-09;31!UBERON:0004921;1.94e-07;33!UBERON:0000365;6.21e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.65e-43,6;UBERON:0003293,3.65e-43,6;UBERON:0003294,3.65e-43,6;UBERON:0010047,3.65e-43,6;UBERON:0000167,3.65e-43,6;UBERON:0003408,2.78e-26,10;UBERON:0000166,2.17e-12,22;UBERON:0000165,1.44e-09,29;UBERON:0000930,1.44e-09,29;UBERON:0002365,5.39e-09,31;UBERON:0002330,5.39e-09,31;UBERON:0000161,7.77e-08,36;UBERON:0000365,6.04e-07,5|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.958120975510189,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,3.88620993508188,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,1.52581736317083,0,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C458 | |||
|description=CAGE_peak_at_chr20:3295706..3295717,- | |||
|id=chr20:3295706..3295717,- | |||
|ontology_enrichment_celltype=CL:0000128!5.51e-12!7;CL:0000126!5.51e-12!7;CL:0000127!5.51e-12!7;CL:0002453!5.51e-12!7;CL:0002623!1.74e-11!3;CL:0002605!3.64e-11!3;CL:0000622!5.16e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.68e-85;3!CL:0000622;1.78e-51;5!CL:0000154;4.53e-43;6!CL:0000150;4.88e-29;9!CL:0002251;1.59e-13;20!CL:0000244;2.35e-08;4!CL:0000731;2.35e-08;4!CL:0000151;2.37e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.04e-85,3;CL:0000622,1.37e-51,5;CL:0000154,3.65e-43,6;CL:0000150,4.23e-29,9;CL:0002251,1.49e-13,20;CL:0000244,2.26e-08,4;CL:0000731,2.26e-08,4;CL:0000151,7.77e-08,36;CL:0002076,8.36e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.04e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.58e-15!59;UBERON:0001017!2.87e-15!82;UBERON:0001049!1.79e-14!57;UBERON:0005068!1.79e-14!57;UBERON:0006241!1.79e-14!57;UBERON:0007135!1.79e-14!57;UBERON:0005743!2.67e-14!86;UBERON:0000955!5.80e-14!69;UBERON:0006238!5.80e-14!69;UBERON:0000073!2.04e-12!94;UBERON:0001016!2.04e-12!94;UBERON:0000033!2.02e-10!123;UBERON:0003075!2.19e-10!86;UBERON:0007284!2.19e-10!86;UBERON:0000988!4.11e-10!3;UBERON:0002346!1.03e-09!90;UBERON:0000153!1.17e-09!129;UBERON:0007811!1.17e-09!129;UBERON:0002780!1.53e-09!41;UBERON:0001890!1.53e-09!41;UBERON:0006240!1.53e-09!41;UBERON:0003080!2.97e-09!42;UBERON:0004121!5.73e-09!169;UBERON:0004733!8.68e-09!12;UBERON:0002028!8.68e-09!12;UBERON:0007277!8.68e-09!12;UBERON:0002020!9.81e-09!34;UBERON:0003528!9.81e-09!34;UBERON:0002680!1.18e-08!9;UBERON:0001895!1.18e-08!9;UBERON:0010092!1.18e-08!9;UBERON:0000924!1.32e-08!173;UBERON:0006601!1.32e-08!173;UBERON:0001893!1.81e-08!34;UBERON:0004732!4.64e-08!13;UBERON:0001869!1.44e-07!32;UBERON:0002148!1.61e-07!2;UBERON:0009662!1.61e-07!2;UBERON:0007023!2.02e-07!115;UBERON:0002791!2.76e-07!33;UBERON:0003076!6.79e-07!15;UBERON:0003057!6.79e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.53e-43;6!UBERON:0003293;4.53e-43;6!UBERON:0003294;4.53e-43;6!UBERON:0010047;4.53e-43;6!UBERON:0003408;4.53e-43;6!UBERON:0000167;4.53e-43;6!UBERON:0001041;5.56e-19;14!UBERON:0000161;3.38e-14;19!UBERON:0000166;3.38e-14;19!UBERON:0000165;7.24e-10;28!UBERON:0002365;2.97e-09;31!UBERON:0002330;2.97e-09;31!UBERON:0004921;1.94e-07;33!UBERON:0000365;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.65e-43,6;UBERON:0003293,3.65e-43,6;UBERON:0003294,3.65e-43,6;UBERON:0010047,3.65e-43,6;UBERON:0000167,3.65e-43,6;UBERON:0003408,2.78e-26,10;UBERON:0000166,2.17e-12,22;UBERON:0000165,1.44e-09,29;UBERON:0000930,1.44e-09,29;UBERON:0002365,5.39e-09,31;UBERON:0002330,5.39e-09,31;UBERON:0000161,7.77e-08,36;UBERON:0000365,6.04e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.958120975510189,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,3.88620993508188,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,1.52581736317083,0,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,1.23520578864389,0,0,0,0,0,0.690860683462397,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,1.86494547746733,14.5110705529857,11.7514142508396,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:3295706..3295717,- | |||
}} |
Revision as of 08:08, 12 September 2013
Short description: | p@chr20:3295706..3295717, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:3295706..3295717, - |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.04e-85 | 3 |
acinar cell | 1.37e-51 | 5 |
protein secreting cell | 3.65e-43 | 6 |
glandular epithelial cell | 4.23e-29 | 9 |
epithelial cell of alimentary canal | 1.49e-13 | 20 |
transitional epithelial cell | 2.26e-08 | 4 |
urothelial cell | 2.26e-08 | 4 |
secretory cell | 7.77e-08 | 36 |
endo-epithelial cell | 8.36e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 3.65e-43 | 6 |
gland of oral region | 3.65e-43 | 6 |
gland of foregut | 3.65e-43 | 6 |
oral gland | 3.65e-43 | 6 |
oral cavity | 3.65e-43 | 6 |
gland of gut | 2.78e-26 | 10 |
oral opening | 2.17e-12 | 22 |
mouth | 1.44e-09 | 29 |
stomodeum | 1.44e-09 | 29 |
exocrine gland | 5.39e-09 | 31 |
exocrine system | 5.39e-09 | 31 |
orifice | 7.77e-08 | 36 |
urothelium | 6.04e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.