FFCP PHASE1:Hg19::chr20:2781462..2781481,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56265|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15771|TSSclassifier=N|UniProt=Q96SM3|association_with_transcript=-170bp_to_NM_001184699,NM_019609_5end|coexpression_cluster_id=C237|description=CAGE_peak_3_at_CPXM1_5end|id=chr20:2781462..2781481,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000708;8.52e-14;3!CL:0000669;1.55e-10;4!CL:0002549;4.03e-10;2!CL:0002575;6.07e-10;2!CL:0000327;4.62e-07;15!CL:0002541;6.08e-07;3|ontology_enrichment_celltype_v019_2=CL:0000708,8.73e-14,3;CL:0000669,2.02e-10,4;CL:0002549,4.23e-10,2;CL:0002575,5.55e-10,2;CL:0000988,2.20e-07,177;CL:0000327,4.66e-07,15;CL:0002541,4.71e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1240!4.60e-14!39;DOID:8692!2.64e-11!31;DOID:2531!7.35e-11!51;DOID:0060083!7.35e-11!51|ontology_enrichment_disease_v019=DOID:8692;1.94e-18;31!DOID:1240;1.58e-16;39!DOID:2531;2.29e-10;51!DOID:0060083;2.29e-10;51|ontology_enrichment_disease_v019_2=DOID:1240,2.68e-20,39;DOID:8692,4.21e-19,31;DOID:2531,8.93e-15,51;DOID:0060083,8.93e-15,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003210;8.52e-14;3!UBERON:0005629;4.03e-10;2!UBERON:0005358;4.03e-10;2!UBERON:0001886;4.03e-10;2!UBERON:0004086;4.03e-10;2!UBERON:0005282;4.03e-10;2!UBERON:0005281;4.03e-10;2!UBERON:0005284;1.27e-08;5!UBERON:0003124;6.08e-07;3!UBERON:0000920;6.08e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003210,8.73e-14,3;UBERON:0005629,4.23e-10,2;UBERON:0005358,4.23e-10,2;UBERON:0001886,4.23e-10,2;UBERON:0004086,4.23e-10,2;UBERON:0005282,4.23e-10,2;UBERON:0005281,4.23e-10,2;UBERON:0005284,1.45e-08,5;UBERON:0000920,4.71e-07,3|phase1_expression=0,0,0,0,0,0,0,0,1.30592814099919,0,0,0,0,0,0.331397375727916,0,0,0,0,0.369363174230364,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,6.45920966536664,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,14.5388461436928,13.4522055115569,4.21414535640123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.886917589850256,0.351339142772504,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,2.11900398702904,2.88087962239999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,1.04337364477569,0.234817388471643,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34557301214433,2.1798003441664,1.3200891447771,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0.254094624222463,0,1.54657762555539,0.502548796003046,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,1.37060810223918,3.0882908142977,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0.154048617114644,0,0,0.322260734604821,0,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0,0,0,0,0,0,0,1.09814811894422,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,2.8853842595289,0.711418433484141,0.956557636372934,6.18696051441731,5.1706449935739,7.83192256078367,2.59697552219644,5.61594356226918,0.228234679033192,0,70.1776535852188,3.72441911163527,0,0,0,0.343505344755765,0,0,0,1.17232857241224,0,0,0,0.33307196799782,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0.20453736500431,2.8309505256046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,4.78501739597879,0.0915975934018623,1.5991043280559,0,0.470940769185074,1.66211681900156,0.451191321234361,0,0.167821586975843,0.37950746544837,4.4502242114506,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.593042257361244,0.988511511572023,1.35748534357092,0,0,0,0,0,0,0.789168805698781,0,0.30607276163049,0.568679216656392,0.150323419414493,0.103688191397247,0,0,0,0,3.41531455235751,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94226116468806,0,8.93817004549669,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.592713324460491,0,0,0.482259445395058,0.275078873194468,0.415440338029185,1.799791132412,0,0.060749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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56265 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15771 | |||
|TSSclassifier=N | |||
|UniProt=Q96SM3 | |||
|association_with_transcript=-170bp_to_NM_001184699,NM_019609_5end | |||
|coexpression_cluster_id=C237 | |||
|description=CAGE_peak_3_at_CPXM1_5end | |||
|id=chr20:2781462..2781481,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000708;8.52e-14;3!CL:0000669;1.55e-10;4!CL:0002549;4.03e-10;2!CL:0002575;6.07e-10;2!CL:0000327;4.62e-07;15!CL:0002541;6.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,8.73e-14,3;CL:0000669,2.02e-10,4;CL:0002549,4.23e-10,2;CL:0002575,5.55e-10,2;CL:0000988,2.20e-07,177;CL:0000327,4.66e-07,15;CL:0002541,4.71e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!4.60e-14!39;DOID:8692!2.64e-11!31;DOID:2531!7.35e-11!51;DOID:0060083!7.35e-11!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.94e-18;31!DOID:1240;1.58e-16;39!DOID:2531;2.29e-10;51!DOID:0060083;2.29e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.68e-20,39;DOID:8692,4.21e-19,31;DOID:2531,8.93e-15,51;DOID:0060083,8.93e-15,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;8.52e-14;3!UBERON:0005629;4.03e-10;2!UBERON:0005358;4.03e-10;2!UBERON:0001886;4.03e-10;2!UBERON:0004086;4.03e-10;2!UBERON:0005282;4.03e-10;2!UBERON:0005281;4.03e-10;2!UBERON:0005284;1.27e-08;5!UBERON:0003124;6.08e-07;3!UBERON:0000920;6.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,8.73e-14,3;UBERON:0005629,4.23e-10,2;UBERON:0005358,4.23e-10,2;UBERON:0001886,4.23e-10,2;UBERON:0004086,4.23e-10,2;UBERON:0005282,4.23e-10,2;UBERON:0005281,4.23e-10,2;UBERON:0005284,1.45e-08,5;UBERON:0000920,4.71e-07,3 | |||
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|short_description=p3@CPXM1 | |||
}} |
Revision as of 07:55, 12 September 2013
Short description: | p3@CPXM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CPXM1_5end |
Coexpression cluster: | C237_acute_breast_testicular_hepatoblastoma_chronic_argyrophil_Bronchial |
Association with transcript: | -170bp_to_NM_001184699, NM_019609_5end |
EntrezGene: | CPXM1 |
HGNC: | 15771 |
UniProt: | Q96SM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 8.73e-14 | 3 |
pericyte cell | 2.02e-10 | 4 |
fibroblast of choroid plexus | 4.23e-10 | 2 |
central nervous system pericyte | 5.55e-10 | 2 |
hematopoietic cell | 2.20e-07 | 177 |
extracellular matrix secreting cell | 4.66e-07 | 15 |
chorionic membrane mesenchymal stem cell | 4.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 8.73e-14 | 3 |
vascular plexus | 4.23e-10 | 2 |
ventricle of nervous system | 4.23e-10 | 2 |
choroid plexus | 4.23e-10 | 2 |
brain ventricle | 4.23e-10 | 2 |
ventricular system of brain | 4.23e-10 | 2 |
ventricular system of central nervous system | 4.23e-10 | 2 |
brain vasculature | 1.45e-08 | 5 |
egg chorion | 4.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.68e-20 | 39 |
myeloid leukemia | 4.21e-19 | 31 |
hematologic cancer | 8.93e-15 | 51 |
immune system cancer | 8.93e-15 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.