FFCP PHASE1:Hg19::chr20:17949081..17949092,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27131|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14969|TSSclassifier=S|UniProt=Q5QPE5|association_with_transcript=8bp_to_ENST00000431277_5end|description=CAGE_peak_4_at_SNX5_5end|id=chr20:17949081..17949092,-|ontology_enrichment_celltype=CL:0000557!2.83e-07!71;CL:0000839!9.81e-07!70|ontology_enrichment_celltype_v019=CL:0000097;1.98e-07;5|ontology_enrichment_celltype_v019_2=CL:0000557,3.07e-11,67;CL:0000839,7.81e-11,66;CL:0000766,4.11e-09,72;CL:0002009,3.36e-08,61;CL:0002194,4.24e-08,59;CL:0000576,4.24e-08,59;CL:0000040,4.24e-08,59;CL:0000559,4.24e-08,59;CL:0000763,8.08e-08,108;CL:0000049,8.08e-08,108;CL:0000097,1.75e-07,5;CL:0002028,1.75e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.65e-08!102;UBERON:0003061!4.65e-08!102;UBERON:0002193!8.89e-07!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.83e-11,98;UBERON:0003061,1.83e-11,98;UBERON:0002371,2.67e-10,76;UBERON:0002193,6.32e-10,108;UBERON:0002405,7.77e-10,93;UBERON:0001474,8.76e-09,82;UBERON:0004765,2.56e-08,90;UBERON:0001434,1.56e-07,100|phase1_expression=0.54503513781167,0.856402095563933,1.26858963686374,3.00219895059391,1.34088328328186,0.872338524100369,0,0.631719873426831,1.04474251279935,0.245733936501509,0,0.218441372130172,0,0.74259811776028,0.994192127183747,1.34465029290355,0.602694528023977,0,0,0.123121058076788,0,0.626909442956176,0.85870796139317,0.136874425072884,0.125542639594803,0.458480434487708,0.57470412614962,0.629686250509434,0,0.767658796194425,0.77408061658038,0,0,0,0.92960640696362,0.284338464974843,2.05520307534393,0,0,0.868043482863407,8.50878802111712,6.15397965436061,6.18181362322048,0.436194716338694,2.64513160582167,0.727752183563449,1.16214518452842,0.411167888021826,1.54853185447552,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,0,1.35426486594342,0.941211697713023,0.545812300115692,0.898893937780338,1.22433556948361,1.28371610830437,0.639337125799041,0,0.598390972864896,0.852449501065388,0.870627715885752,0.56738522469114,0,0.251248665256743,2.08593167368081,1.3031330682307,0,0.368277635987565,0.316462387440884,2.5350634357433,2.55125159958052,2.72556239160889,2.02191536063691,1.65194582125657,0.48217676009124,6.27028036230747,5.17183360717634,4.20127553658658,0,2.18455444504853,2.66852776159066,1.70692089026603,0.800791974072025,1.14950487990897,1.98313461835459,2.86216126360609,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0,1.05353633910031,0.196709770113833,0.393010762749165,0,1.83905144929746,0,0,0,2.67385096524417,0.294605907474837,0.664601683750863,0.541607727530031,1.79327847615945,1.69077151827842,0.986627427622057,0.552700035571697,0.579606171470105,0.296573126324121,0.267540828089713,0,1.13309342697566,0,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0.150575119077773,0.255973222308837,0,0.710331756132051,0,0.201606743224732,0.267440195783507,0.289648807765598,2.43806866313962,1.34140171940727,0.383587685530591,0.361439152384566,1.00267582127178,1.15877215168659,2.3858578411533,1.45990461090791,0.850813354476611,0.886917589850256,1.05401742831751,1.24430121722827,0.364295288292542,0,11.3591587779139,9.5771355514597,9.04114131528283,0.715471872916026,1.14398982156026,0.74291500265913,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0,0.24406205754817,0,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,1.14734648299525,0.709336764396714,0.560677600142307,0,0.24666754841716,1.24484414159907,0.269421344139376,0.326923806226917,0.605429710579726,0,0,0.312160076830321,1.1409436430889,0.896692083310806,0,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0.554128230968366,0.877955241761676,0.30648779579902,0.45071417671979,0.113432183160021,0.717558542755448,0.640672166455702,0.423863802319124,1.20036438433761,0.618315175430633,0.772921620136887,0.744467425326359,0.843881661206331,0.487185025805993,0.504867548488229,0.552299391853796,1.61646056818812,0.355009592516614,0.705264687593482,0.339121184620975,0.57978255948989,0,0,1.09776335516636,1.06023814657188,1.16193942869518,0.621966330092223,0.504641701751257,1.09493207722749,1.56449532329816,0,0,0.928735856063958,0,0.473227200159376,0.505754070234305,0.964044119533928,0.441175890929576,0.217879444092406,0.474541238222193,0.943819157121151,0.588664395376038,0.38474715694639,0.738155454624648,0,0,0,0,1.96565443335525,0,0.441463099414651,1.47586126251736,1.20097467208968,0.329250856225877,0,0.201057944823262,0.740707561268237,0,0,0,0.695582429850461,1.17408694235822,0,0.462985512576611,0.380508304469197,1.58040879591855,0,5.4167741339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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14969 | |||
|TSSclassifier=S | |||
|UniProt=Q5QPE5 | |||
|association_with_transcript=8bp_to_ENST00000431277_5end | |||
|description=CAGE_peak_4_at_SNX5_5end | |||
|id=chr20:17949081..17949092,- | |||
|ontology_enrichment_celltype=CL:0000557!2.83e-07!71;CL:0000839!9.81e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.07e-11,67;CL:0000839,7.81e-11,66;CL:0000766,4.11e-09,72;CL:0002009,3.36e-08,61;CL:0002194,4.24e-08,59;CL:0000576,4.24e-08,59;CL:0000040,4.24e-08,59;CL:0000559,4.24e-08,59;CL:0000763,8.08e-08,108;CL:0000049,8.08e-08,108;CL:0000097,1.75e-07,5;CL:0002028,1.75e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.65e-08!102;UBERON:0003061!4.65e-08!102;UBERON:0002193!8.89e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.83e-11,98;UBERON:0003061,1.83e-11,98;UBERON:0002371,2.67e-10,76;UBERON:0002193,6.32e-10,108;UBERON:0002405,7.77e-10,93;UBERON:0001474,8.76e-09,82;UBERON:0004765,2.56e-08,90;UBERON:0001434,1.56e-07,100 | |||
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| |||
|short_description=p4@SNX5 | |||
}} |
Revision as of 07:36, 12 September 2013
Short description: | p4@SNX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SNX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000431277_5end |
EntrezGene: | SNX5 |
HGNC: | 14969 |
UniProt: | Q5QPE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.07e-11 | 67 |
myeloid lineage restricted progenitor cell | 7.81e-11 | 66 |
myeloid leukocyte | 4.11e-09 | 72 |
macrophage dendritic cell progenitor | 3.36e-08 | 61 |
monopoietic cell | 4.24e-08 | 59 |
monocyte | 4.24e-08 | 59 |
monoblast | 4.24e-08 | 59 |
promonocyte | 4.24e-08 | 59 |
myeloid cell | 8.08e-08 | 108 |
common myeloid progenitor | 8.08e-08 | 108 |
mast cell | 1.75e-07 | 5 |
basophil mast progenitor cell | 1.75e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.83e-11 | 98 |
blood island | 1.83e-11 | 98 |
bone marrow | 2.67e-10 | 76 |
hemolymphoid system | 6.32e-10 | 108 |
immune system | 7.77e-10 | 93 |
bone element | 8.76e-09 | 82 |
skeletal element | 2.56e-08 | 90 |
skeletal system | 1.56e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.