FFCP PHASE1:Hg19::chr20:12989828..12989835,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55304|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16253|TSSclassifier=S|UniProt=C9JC36|association_with_transcript=6bp_to_ENST00000378194_5end|description=CAGE_peak_7_at_SPTLC3_5end|id=chr20:12989828..12989835,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003124;1.23e-66;1!UBERON:0004872;8.16e-11;7!UBERON:0005795;5.73e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;5.96e-34;2|ontology_enrichment_disease_v019_2=DOID:3307,5.04e-34,2|ontology_enrichment_uberon=UBERON:0007023!7.64e-10!115;UBERON:0000924!1.41e-07!173;UBERON:0006601!1.41e-07!173;UBERON:0004121!1.76e-07!169|ontology_enrichment_uberon_v019=UBERON:0001954;5.96e-34;2!UBERON:0003022;5.96e-34;2!UBERON:0002421;5.96e-34;2!UBERON:0002600;5.96e-34;2!UBERON:0001987;7.35e-18;4!UBERON:0000349;1.71e-14;5|ontology_enrichment_uberon_v019_2=UBERON:0001954,7.05e-34,2;UBERON:0003022,7.05e-34,2;UBERON:0002421,7.05e-34,2;UBERON:0002600,7.05e-34,2;UBERON:0001987,7.35e-18,4;UBERON:0004340,7.35e-18,4;UBERON:0000349,1.83e-14,5;UBERON:0003124,8.16e-11,7|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.329250856225877,0,0,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0.269605053441981,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0,0.23056390438806,0.359030577639089,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.347119476670262,0.195984794828755,0.435296032902013,0,0,0,0,0,0.484945082442097,0,0,0.274083849293502,0.19871461170299,0.126621591911757,0.391102765469606,0.240476460754601,0,0.19980960958213,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0.550285795565037,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,2.12885688390333,0,0,0.135939465953663,0,0,0,0.156986185701028,0.157115589916002,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16253 | |||
|TSSclassifier=S | |||
|UniProt=C9JC36 | |||
|association_with_transcript=6bp_to_ENST00000378194_5end | |||
|description=CAGE_peak_7_at_SPTLC3_5end | |||
|id=chr20:12989828..12989835,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.23e-66;1!UBERON:0004872;8.16e-11;7!UBERON:0005795;5.73e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;5.96e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,5.04e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.64e-10!115;UBERON:0000924!1.41e-07!173;UBERON:0006601!1.41e-07!173;UBERON:0004121!1.76e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;5.96e-34;2!UBERON:0003022;5.96e-34;2!UBERON:0002421;5.96e-34;2!UBERON:0002600;5.96e-34;2!UBERON:0001987;7.35e-18;4!UBERON:0000349;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,7.05e-34,2;UBERON:0003022,7.05e-34,2;UBERON:0002421,7.05e-34,2;UBERON:0002600,7.05e-34,2;UBERON:0001987,7.35e-18,4;UBERON:0004340,7.35e-18,4;UBERON:0000349,1.83e-14,5;UBERON:0003124,8.16e-11,7 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.329250856225877,0,0,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0.269605053441981,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0,0.23056390438806,0.359030577639089,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.347119476670262,0.195984794828755,0.435296032902013,0,0,0,0,0,0.484945082442097,0,0,0.274083849293502,0.19871461170299,0.126621591911757,0.391102765469606,0.240476460754601,0,0.19980960958213,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0.550285795565037,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,2.12885688390333,0,0,0.135939465953663,0,0,0,0.156986185701028,0.157115589916002,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0.160482733378337,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0.23806443146374,0.0645889098360061,0,0,0.190941474834495,0.202117188958219,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,1.9307228228694,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p7@SPTLC3 | |||
}} |
Revision as of 07:31, 12 September 2013
Short description: | p7@SPTLC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SPTLC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000378194_5end |
EntrezGene: | SPTLC3 |
HGNC: | 16253 |
UniProt: | C9JC36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 7.05e-34 | 2 |
lobe parts of cerebral cortex | 7.05e-34 | 2 |
hippocampal formation | 7.05e-34 | 2 |
limbic lobe | 7.05e-34 | 2 |
placenta | 7.35e-18 | 4 |
allantois | 7.35e-18 | 4 |
limbic system | 1.83e-14 | 5 |
chorion | 8.16e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
teratoma | 5.04e-34 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.