FFCP PHASE1:Hg19::chr1:8763573..8763584,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=473|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9965|TSSclassifier=W|UniProt=|association_with_transcript=-295bp_to_ENST00000468247_5end|description=CAGE_peak_30_at_RERE_5end|id=chr1:8763573..8763584,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;1.99e-24;5!CL:0000163;1.13e-13;9!CL:0002032;5.70e-09;1!CL:0000557;5.70e-09;1!CL:0000083;3.46e-08;4|ontology_enrichment_celltype_v019_2=CL:0000097,1.83e-24,5;CL:0002028,1.83e-24,5;CL:0000163,1.08e-13,9;CL:0000083,2.78e-08,4|ontology_enrichment_development_v019=UBERON:0008425;1.37e-08;1|ontology_enrichment_disease=DOID:0050687!3.45e-09!143;DOID:305!4.07e-09!106|ontology_enrichment_disease_v019=DOID:0050619;5.70e-09;1!DOID:1357;5.70e-09;1!DOID:2355;5.70e-09;1!DOID:1793;3.46e-08;4!DOID:171;2.44e-07;10|ontology_enrichment_disease_v019_2=DOID:2355,5.28e-09,1;DOID:0050619,7.75e-09,1;DOID:1357,7.75e-09,1;DOID:1793,2.78e-08,4;DOID:171,2.31e-07,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002346;1.35e-17;4!UBERON:0000923;1.35e-17;4!UBERON:0010316;1.35e-17;4!UBERON:0005291;1.35e-17;4!UBERON:0002050;3.42e-14;5!UBERON:0005423;3.42e-14;5!UBERON:0001764;5.70e-09;1!UBERON:0001825;5.70e-09;1!UBERON:0000945;4.12e-07;5!UBERON:0010039;4.12e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001764,7.75e-09,1;UBERON:0001825,7.75e-09,1|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0.229240217243854,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0,0.142169232487422,0.587200878669695,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0,0.785874452986276,1.09288586487763,0,0,0.174129737299267,0.132957960518865,0,0,0,0.596287222100115,0,1.04142150482278,0,0.419499436209906,0,0,0,0.35576626268671,0.33472061276467,0,0,0.976248230192678,0,0.81014194788176,0,0.44905874525234,1.12611480483322,0,0.949265659568129,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0.277064115484183,0.438977620880838,0,0.600952235626387,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0.355009592516614,0,0,0,0.272746120590835,0,0.243947412259191,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,3.94130590316755,0.088048434013226,2.48793738648926,1.29707958075265,2.14612136824846,0.126995788584338,0.763976851116555,0,0,0,0,0,0,0,0,0.517086863031111,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0.601892199455438,2.27407504055985,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0.482561763430822,0,0.154209693802656,0,0.164254312027618,0,0,0.120859449591622,0,0.184161977871793,0.229628896329213,0.182091168006717,0,0.451199612907412,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.0915694648183434,0,0.574265537996172,0,0,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0,0.255679882248303,0,0.165284915360978,0,0.255225424989168,0.30347334256665,0,0,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0,0.606547444719948,0,0,0.48763373908959,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0.709522128141196,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.28853842595289,0,0,0,0.5745161103971,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,1.09224469574562,0.111443384277478,0,0,0,0,0,0.422008249231538,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0.0898683511473268,0.179021174675609,0,0.591860433821602,0,0,0,0.185536196323703,0,0,1.2244399999467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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=473 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-295bp_to_ENST00000468247_5end | |||
|description=CAGE_peak_30_at_RERE_5end | |||
|id=chr1:8763573..8763584,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.99e-24;5!CL:0000163;1.13e-13;9!CL:0002032;5.70e-09;1!CL:0000557;5.70e-09;1!CL:0000083;3.46e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.83e-24,5;CL:0002028,1.83e-24,5;CL:0000163,1.08e-13,9;CL:0000083,2.78e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.37e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!3.45e-09!143;DOID:305!4.07e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:0050619;5.70e-09;1!DOID:1357;5.70e-09;1!DOID:2355;5.70e-09;1!DOID:1793;3.46e-08;4!DOID:171;2.44e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.28e-09,1;DOID:0050619,7.75e-09,1;DOID:1357,7.75e-09,1;DOID:1793,2.78e-08,4;DOID:171,2.31e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.35e-17;4!UBERON:0000923;1.35e-17;4!UBERON:0010316;1.35e-17;4!UBERON:0005291;1.35e-17;4!UBERON:0002050;3.42e-14;5!UBERON:0005423;3.42e-14;5!UBERON:0001764;5.70e-09;1!UBERON:0001825;5.70e-09;1!UBERON:0000945;4.12e-07;5!UBERON:0010039;4.12e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,7.75e-09,1;UBERON:0001825,7.75e-09,1 | |||
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| |||
|short_description=p30@RERE | |||
}} |
Revision as of 07:02, 12 September 2013
Short description: | p30@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | -295bp_to_ENST00000468247_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.83e-24 | 5 |
basophil mast progenitor cell | 1.83e-24 | 5 |
endocrine cell | 1.08e-13 | 9 |
epithelial cell of pancreas | 2.78e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 7.75e-09 | 1 |
paranasal sinus | 7.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
anemia | 5.28e-09 | 1 |
paranasal sinus cancer | 7.75e-09 | 1 |
maxillary sinus cancer | 7.75e-09 | 1 |
pancreatic cancer | 2.78e-08 | 4 |
neuroectodermal tumor | 2.31e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.