FFCP PHASE1:Hg19::chr1:840205..840230,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3998|description=CAGE_peak_at_chr1:840205..840230,+|id=chr1:840205..840230,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;5.46e-08;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!2.19e-09!143;DOID:162!4.80e-09!235;DOID:14566!1.62e-08!239;DOID:171!9.60e-08!10|ontology_enrichment_disease_v019=DOID:171;3.93e-14;10!DOID:3095;4.99e-08;22!DOID:2994;4.99e-08;22|ontology_enrichment_disease_v019_2=DOID:171,4.89e-14,10;DOID:3095,5.01e-08,22;DOID:2994,5.01e-08,22|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002346;1.24e-09;4!UBERON:0000923;1.24e-09;4!UBERON:0010316;1.24e-09;4!UBERON:0005291;1.24e-09;4!UBERON:0000013;5.46e-08;5!UBERON:0002410;5.46e-08;5!UBERON:0002050;8.71e-08;5!UBERON:0005423;8.71e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.61e-08,5;UBERON:0002410,7.61e-08,5|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0,0,0,1.26343974685366,0.261185628199839,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,0.369363174230364,0.816002764977012,0.313454721478088,0,0,0.376627918784408,0.229240217243854,0.57470412614962,0.550975469195755,0,0,0,0,0.30120591877825,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0.361439152384566,0,1.15877215168659,0,0,0.567208902984407,0.443458794925128,0.43917392846563,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,1.14734648299525,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,1.15235184896,0,0,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.717558542755448,0.427114777637135,0.211931901159562,2.40072876867522,0.618315175430633,2.06112432036503,0.558350568994769,1.5189869901714,1.36411807225678,3.78650661366172,0.0920498986422993,0.484938170456436,1.42003837006646,0.302256294682921,0.339121184620975,0,0,0,0.731842236777572,0.795178609928912,0.464775771478074,1.24393266018445,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,1.91381625495949,0,0,0,0.12269149171914,1.00034104211935,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0.783204629850962,0,0,0,0,0.606255142892519,0,0,0,0,0.561320188866147,0.384417447767103,0,0.482561763430822,0,0.154209693802656,0.355123450626254,0,0,0.348631135379878,0.120859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.256450125116389,1.64007322849853,0.325378394664303,0.206082023295445,2.1060976908219,1.98022799809411,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0,0.537101224341368,0.435050081742686,0,0.178064071293475,0,0,0.510450849978337,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,1.10273068709225,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.956557636372934,0.798317485731266,0,0.211673582723883,2.921597462471,0.280797178113459,1.14117339516596,0,2.50634477090067,0.846458889008016,0.1605880751037,0.403599414382095,0.425846237690326,0.687010689511529,0,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0.748562161632879,0,1.33496573924465,0,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0.667852230137435,0.16480387422676,0.63337622438398,0,0,1.51159648712566,0.102268682502155,0.123084805461069,0,0,0.179021174675609,1.53471711068062,0.0986434056369336,0,0,0,0.278304294485554,1.99613798001194,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0,3.10269035917318,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0,0,0.219385397153973,0.980446171670911,0.139423744278603,0.153900517007594,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0.627921025580099,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,1.08194319871046,0.995261931078505,0,0,0,0,0.104421949505455,0.134802265961354,0.802577647298789,0,0.182454789215666,0,0.242780379534093,0,0,2.75465485467441,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0.69647365264322,0,0,0.290268993867255,0.438535902517113,0.164230914106418,0,0.0882561266915003,0,0.274083849293502,0.596143835108969,0.0633107959558787,0.782205530939212,0.0801588202515337,0.426905989478705,1.59847687665704,0.576361668616424,0.458146384663663,0.171594997861965,0.288109595976299,0.124252535565433,0.471388069233591,0.135904206073614,0.209205692624666,0.203996435272644,0,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0.295282444544246,0,0,0,0.160753148465019,0.275078873194468,0.83088067605837,0,0,0.182248669974074,0.335434687599266,0.0788057072991982,1.57363764404994,0,0,0,0,0,1.5256112259285,0,0,0,0,0.246277562248017,0.511164065356265,0.679872549120754,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,5.53394539744923,0,0,0.285465333544967,0,0.936669811613763,10.7241561172011,0,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.428883182749851,0,0,0,0,0.895444205407437,0,0.657852148736121,0.176689145945881,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0,0,0,0.327609848846413,0.491545817507439,0.211312123358627,0,0.426766918776564,0,0,0,0,0,3.32525365389494,1.07824811396682,0.157265941855896,0.982886743728125,2.0367903594483,2.33832412111851,1.61116493536703,6.14509409770568,0,0.0788617450012534,1.60114149657094,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,1.00828678488687,0.276629009856872,0,0,0.196295437002051,0.471878893390961,0,0.115525666150338,0.381382095467167,0,1.79024599904647,0.0752103283492573,0.20170506870352,0.781514011233092,0.261906694481422,0,0,0.337687923091973,0,0.206686796501184,0,1.09394961803644,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0.235479278551542,0.314231179832004,0,0.913158720509496,0.647782773655864,0,0.500335809236594,4.7404083519818,0.581207126840626,0.521574816907738,1.60342272946051,0,0.17071847709395,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,5.96852325484105,0.356760272332706,0.45178432815584,1.31928620094515,0.452888530700021,0,0,0,0,0.471353094203252,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0.322289439867886,0,0.178553938605658,0,0.0802413666891683,0,0,0.286679166302903,1.89325874631822,0.0679914901909147,3.05445483238264,0.5290268405154,0,0.462175628631418,0.432626562123789,0,0.655593431782173,0.380095503034311,0.305966489225945,0,0,0,0,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.224263725161227,0.0636471582781649,0.202117188958219,0.653150243690884,0.342233301085281,0,0,0,0.162806537221949,0,0,0.359300808426348,0,0.366724332548599,0.406896178315738,0,0.201273793591026,0|short_description=p@chr1:840205..840230,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3998 | |||
|description=CAGE_peak_at_chr1:840205..840230,+ | |||
|id=chr1:840205..840230,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.46e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.19e-09!143;DOID:162!4.80e-09!235;DOID:14566!1.62e-08!239;DOID:171!9.60e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.93e-14;10!DOID:3095;4.99e-08;22!DOID:2994;4.99e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.89e-14,10;DOID:3095,5.01e-08,22;DOID:2994,5.01e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.24e-09;4!UBERON:0000923;1.24e-09;4!UBERON:0010316;1.24e-09;4!UBERON:0005291;1.24e-09;4!UBERON:0000013;5.46e-08;5!UBERON:0002410;5.46e-08;5!UBERON:0002050;8.71e-08;5!UBERON:0005423;8.71e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.61e-08,5;UBERON:0002410,7.61e-08,5 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0,0,0,1.26343974685366,0.261185628199839,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,0.369363174230364,0.816002764977012,0.313454721478088,0,0,0.376627918784408,0.229240217243854,0.57470412614962,0.550975469195755,0,0,0,0,0.30120591877825,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0.361439152384566,0,1.15877215168659,0,0,0.567208902984407,0.443458794925128,0.43917392846563,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,1.14734648299525,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,1.15235184896,0,0,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.717558542755448,0.427114777637135,0.211931901159562,2.40072876867522,0.618315175430633,2.06112432036503,0.558350568994769,1.5189869901714,1.36411807225678,3.78650661366172,0.0920498986422993,0.484938170456436,1.42003837006646,0.302256294682921,0.339121184620975,0,0,0,0.731842236777572,0.795178609928912,0.464775771478074,1.24393266018445,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,1.91381625495949,0,0,0,0.12269149171914,1.00034104211935,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0.783204629850962,0,0,0,0,0.606255142892519,0,0,0,0,0.561320188866147,0.384417447767103,0,0.482561763430822,0,0.154209693802656,0.355123450626254,0,0,0.348631135379878,0.120859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.256450125116389,1.64007322849853,0.325378394664303,0.206082023295445,2.1060976908219,1.98022799809411,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0,0.537101224341368,0.435050081742686,0,0.178064071293475,0,0,0.510450849978337,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,1.10273068709225,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.956557636372934,0.798317485731266,0,0.211673582723883,2.921597462471,0.280797178113459,1.14117339516596,0,2.50634477090067,0.846458889008016,0.1605880751037,0.403599414382095,0.425846237690326,0.687010689511529,0,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0.748562161632879,0,1.33496573924465,0,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0.667852230137435,0.16480387422676,0.63337622438398,0,0,1.51159648712566,0.102268682502155,0.123084805461069,0,0,0.179021174675609,1.53471711068062,0.0986434056369336,0,0,0,0.278304294485554,1.99613798001194,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0,3.10269035917318,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0,0,0.219385397153973,0.980446171670911,0.139423744278603,0.153900517007594,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0.627921025580099,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,1.08194319871046,0.995261931078505,0,0,0,0,0.104421949505455,0.134802265961354,0.802577647298789,0,0.182454789215666,0,0.242780379534093,0,0,2.75465485467441,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0.69647365264322,0,0,0.290268993867255,0.438535902517113,0.164230914106418,0,0.0882561266915003,0,0.274083849293502,0.596143835108969,0.0633107959558787,0.782205530939212,0.0801588202515337,0.426905989478705,1.59847687665704,0.576361668616424,0.458146384663663,0.171594997861965,0.288109595976299,0.124252535565433,0.471388069233591,0.135904206073614,0.209205692624666,0.203996435272644,0,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0.295282444544246,0,0,0,0.160753148465019,0.275078873194468,0.83088067605837,0,0,0.182248669974074,0.335434687599266,0.0788057072991982,1.57363764404994,0,0,0,0,0,1.5256112259285,0,0,0,0,0.246277562248017,0.511164065356265,0.679872549120754,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,5.53394539744923,0,0,0.285465333544967,0,0.936669811613763,10.7241561172011,0,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.428883182749851,0,0,0,0,0.895444205407437,0,0.657852148736121,0.176689145945881,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0,0,0,0.327609848846413,0.491545817507439,0.211312123358627,0,0.426766918776564,0,0,0,0,0,3.32525365389494,1.07824811396682,0.157265941855896,0.982886743728125,2.0367903594483,2.33832412111851,1.61116493536703,6.14509409770568,0,0.0788617450012534,1.60114149657094,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,1.00828678488687,0.276629009856872,0,0,0.196295437002051,0.471878893390961,0,0.115525666150338,0.381382095467167,0,1.79024599904647,0.0752103283492573,0.20170506870352,0.781514011233092,0.261906694481422,0,0,0.337687923091973,0,0.206686796501184,0,1.09394961803644,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0.235479278551542,0.314231179832004,0,0.913158720509496,0.647782773655864,0,0.500335809236594,4.7404083519818,0.581207126840626,0.521574816907738,1.60342272946051,0,0.17071847709395,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,5.96852325484105,0.356760272332706,0.45178432815584,1.31928620094515,0.452888530700021,0,0,0,0,0.471353094203252,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0.322289439867886,0,0.178553938605658,0,0.0802413666891683,0,0,0.286679166302903,1.89325874631822,0.0679914901909147,3.05445483238264,0.5290268405154,0,0.462175628631418,0.432626562123789,0,0.655593431782173,0.380095503034311,0.305966489225945,0,0,0,0,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.224263725161227,0.0636471582781649,0.202117188958219,0.653150243690884,0.342233301085281,0,0,0,0.162806537221949,0,0,0.359300808426348,0,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr1:840205..840230,+ | |||
}} |
Revision as of 06:52, 12 September 2013
Short description: | p@chr1:840205..840230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:840205..840230, + |
Coexpression cluster: | C3998_merkel_neuroepithelioma_small_medulloblastoma_acute_Hodgkin_retinoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.61e-08 | 5 |
autonomic nervous system | 7.61e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.89e-14 | 10 |
germ cell and embryonal cancer | 5.01e-08 | 22 |
germ cell cancer | 5.01e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.