FFCP PHASE1:Hg19::chr1:67218124..67218159,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=200132|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26882|TSSclassifier=S|UniProt=Q8N7M0|association_with_transcript=0bp_to_ENST00000282670,ENST00000525663,NM_152665,uc001dcv.2,uc009wau.2,uc009wav.2_5end|description=CAGE_peak_1_at_TCTEX1D1_5end|id=chr1:67218124..67218159,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;2.82e-10;5|ontology_enrichment_celltype_v019_2=CL:0000097,2.99e-10,5;CL:0002028,2.99e-10,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!1.87e-07!31|ontology_enrichment_disease_v019=DOID:8692;9.61e-14;31!DOID:1240;9.15e-08;39|ontology_enrichment_disease_v019_2=DOID:8692,1.78e-14,31;DOID:1240,2.16e-10,39;DOID:2531,8.86e-07,51;DOID:0060083,8.86e-07,51|ontology_enrichment_uberon=UBERON:0007023!6.37e-26!115;UBERON:0001049!3.19e-16!57;UBERON:0005068!3.19e-16!57;UBERON:0006241!3.19e-16!57;UBERON:0007135!3.19e-16!57;UBERON:0003075!1.14e-13!86;UBERON:0007284!1.14e-13!86;UBERON:0002616!7.66e-13!59;UBERON:0002346!1.19e-12!90;UBERON:0001017!1.51e-11!82;UBERON:0003080!2.21e-11!42;UBERON:0005743!2.52e-11!86;UBERON:0002780!5.00e-11!41;UBERON:0001890!5.00e-11!41;UBERON:0006240!5.00e-11!41;UBERON:0000955!5.08e-10!69;UBERON:0006238!5.08e-10!69;UBERON:0000073!1.15e-09!94;UBERON:0001016!1.15e-09!94;UBERON:0002020!4.75e-09!34;UBERON:0003528!4.75e-09!34;UBERON:0000153!7.08e-09!129;UBERON:0007811!7.08e-09!129;UBERON:0001893!9.93e-09!34;UBERON:0000033!1.20e-08!123;UBERON:0003056!1.34e-08!61;UBERON:0002791!2.08e-08!33;UBERON:0001869!8.20e-08!32;UBERON:0002298!3.76e-07!8|ontology_enrichment_uberon_v019=UBERON:0002298;1.31e-11;6!UBERON:0004732;6.24e-08;13!UBERON:0004733;5.93e-07;12!UBERON:0002028;5.93e-07;12!UBERON:0001896;9.36e-07;3!UBERON:0005290;9.36e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.39e-11,6;UBERON:0007023,5.13e-09,114;UBERON:0003076,1.59e-08,15;UBERON:0003057,1.59e-08,15;UBERON:0004732,5.48e-08,13;UBERON:0001049,8.90e-08,56;UBERON:0005068,8.90e-08,56;UBERON:0006241,8.90e-08,56;UBERON:0007135,8.90e-08,56;UBERON:0004733,5.72e-07,12;UBERON:0002028,5.72e-07,12;UBERON:0007277,5.72e-07,12;UBERON:0001896,9.46e-07,3;UBERON:0005290,9.46e-07,3;UBERON:0010096,9.46e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0,0.502170558379211,0,0,0,0,0,0.309632246632152,0,0,0,0,0,1.76160263600908,0,0,0,0.223915474239924,0,0.257575567634187,0.726991193897824,0,0,0.464858073811369,0,0.309706370895104,0,0,0,1.03423704220986,0,0,0.941211697713023,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.419317291016752,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0.361439152384566,2.00535164254356,0.579386075843295,0,0,0.661743720148475,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0,1.03366703667732,1.06729878806013,2.00832367658802,0.402829317109147,0,0.732186172644509,1.10298924103761,0,2.23249320710199,1.79623498100936,2.0270066486998,4.5994991239765,0.949265659568129,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0.404132016209064,0,0,0,0.234321431833797,0.312160076830321,0,0.448346041655403,1.64408298101271,0.971237666208789,0.98315564691574,2.24569588380383,0.491337269247072,1.23990937410919,1.18800285728205,0.247266929278557,0,0,1.0100166837244,0.875829639103749,1.38532057742091,0.438977620880838,0.612975591598039,0.150238058906597,0.340296549480063,0.717558542755448,0.640672166455702,0.635795703478686,1.20036438433761,0.92747276314595,0,0.18611685633159,1.68776332241266,0.779496041289589,1.51460264546469,1.74894807420369,0,1.06502877754984,0.503760491138201,1.18692414617341,0,0,0,0.487894824518382,0.662648841607426,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,3.25057549622385,1.44375896333917,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0.977424915930974,1.03993478527958,0,0.579652024875384,0.117408694235822,0.433099343283221,0,0.951270761172991,0,0,1.47730203652438,0,1.33768046059855,0,0,0,0,0,0,19.2138662779418,20.8674788611346,7.04915592838625,10.8089965062721,6.56460653817176,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,2.57207374262142,1.41849132023278,2.39779961114489,0,0,0,2.28015329005615,0,1.58390374586686,0,0,0,1.2162378064119,0,0,0,0,0,1.01346914667305,0.410952645100767,0.537182889719687,0,0.197030760201927,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0.356857977594324,0,0,0,0,0,0,0,1.21637060255316,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.804269605718038,0,1.69630663182921,0,1.31403449622095,1.03850885836724,0.813472649219715,0,0,0,0.34444334449382,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=200132 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26882 | |||
|TSSclassifier=S | |||
|UniProt=Q8N7M0 | |||
|association_with_transcript=0bp_to_ENST00000282670,ENST00000525663,NM_152665,uc001dcv.2,uc009wau.2,uc009wav.2_5end | |||
|description=CAGE_peak_1_at_TCTEX1D1_5end | |||
|id=chr1:67218124..67218159,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.82e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.99e-10,5;CL:0002028,2.99e-10,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.87e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.61e-14;31!DOID:1240;9.15e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.78e-14,31;DOID:1240,2.16e-10,39;DOID:2531,8.86e-07,51;DOID:0060083,8.86e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.37e-26!115;UBERON:0001049!3.19e-16!57;UBERON:0005068!3.19e-16!57;UBERON:0006241!3.19e-16!57;UBERON:0007135!3.19e-16!57;UBERON:0003075!1.14e-13!86;UBERON:0007284!1.14e-13!86;UBERON:0002616!7.66e-13!59;UBERON:0002346!1.19e-12!90;UBERON:0001017!1.51e-11!82;UBERON:0003080!2.21e-11!42;UBERON:0005743!2.52e-11!86;UBERON:0002780!5.00e-11!41;UBERON:0001890!5.00e-11!41;UBERON:0006240!5.00e-11!41;UBERON:0000955!5.08e-10!69;UBERON:0006238!5.08e-10!69;UBERON:0000073!1.15e-09!94;UBERON:0001016!1.15e-09!94;UBERON:0002020!4.75e-09!34;UBERON:0003528!4.75e-09!34;UBERON:0000153!7.08e-09!129;UBERON:0007811!7.08e-09!129;UBERON:0001893!9.93e-09!34;UBERON:0000033!1.20e-08!123;UBERON:0003056!1.34e-08!61;UBERON:0002791!2.08e-08!33;UBERON:0001869!8.20e-08!32;UBERON:0002298!3.76e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.31e-11;6!UBERON:0004732;6.24e-08;13!UBERON:0004733;5.93e-07;12!UBERON:0002028;5.93e-07;12!UBERON:0001896;9.36e-07;3!UBERON:0005290;9.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.39e-11,6;UBERON:0007023,5.13e-09,114;UBERON:0003076,1.59e-08,15;UBERON:0003057,1.59e-08,15;UBERON:0004732,5.48e-08,13;UBERON:0001049,8.90e-08,56;UBERON:0005068,8.90e-08,56;UBERON:0006241,8.90e-08,56;UBERON:0007135,8.90e-08,56;UBERON:0004733,5.72e-07,12;UBERON:0002028,5.72e-07,12;UBERON:0007277,5.72e-07,12;UBERON:0001896,9.46e-07,3;UBERON:0005290,9.46e-07,3;UBERON:0010096,9.46e-07,3 | |||
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| |||
|short_description=p1@TCTEX1D1 | |||
}} |
Revision as of 06:34, 12 September 2013
Short description: | p1@TCTEX1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TCTEX1D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000282670, ENST00000525663, NM_152665, uc001dcv.2, uc009wau.2, uc009wav.2_5end |
EntrezGene: | TCTEX1D1 |
HGNC: | 26882 |
UniProt: | Q8N7M0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.99e-10 | 5 |
basophil mast progenitor cell | 2.99e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
brainstem | 1.39e-11 | 6 |
adult organism | 5.13e-09 | 114 |
posterior neural tube | 1.59e-08 | 15 |
chordal neural plate | 1.59e-08 | 15 |
segmental subdivision of nervous system | 5.48e-08 | 13 |
neural tube | 8.90e-08 | 56 |
neural rod | 8.90e-08 | 56 |
future spinal cord | 8.90e-08 | 56 |
neural keel | 8.90e-08 | 56 |
segmental subdivision of hindbrain | 5.72e-07 | 12 |
hindbrain | 5.72e-07 | 12 |
presumptive hindbrain | 5.72e-07 | 12 |
medulla oblongata | 9.46e-07 | 3 |
myelencephalon | 9.46e-07 | 3 |
future myelencephalon | 9.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.78e-14 | 31 |
leukemia | 2.16e-10 | 39 |
hematologic cancer | 8.86e-07 | 51 |
immune system cancer | 8.86e-07 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.