FFCP PHASE1:Hg19::chr1:6663744..6663762,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9903|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=29041|TSSclassifier=S|UniProt=Q2NKK7|association_with_transcript=0bp_to_ENST00000505933_5end|coexpression_cluster_id=C1656|description=CAGE_peak_3_at_KLHL21_5end|id=chr1:6663744..6663762,-|ontology_enrichment_celltype=CL:0000738!1.79e-46!140;CL:0000037!9.96e-38!172;CL:0000566!9.96e-38!172;CL:0000988!2.62e-35!182;CL:0002031!1.40e-34!124;CL:0002032!1.06e-33!165;CL:0000837!1.06e-33!165;CL:0002087!1.81e-32!119;CL:0002057!8.35e-29!42;CL:0000860!9.83e-26!45;CL:0000766!2.75e-25!76;CL:0000557!4.02e-20!71;CL:0000839!4.61e-20!70;CL:0000763!7.47e-20!112;CL:0000049!7.47e-20!112;CL:0002009!1.25e-18!65;CL:0000134!2.32e-18!358;CL:0002194!4.05e-17!63;CL:0000576!4.05e-17!63;CL:0000040!4.05e-17!63;CL:0000559!4.05e-17!63;CL:0002320!4.09e-17!365;CL:0000219!1.41e-15!390;CL:0000542!6.44e-13!53;CL:0000051!6.44e-13!53;CL:0000838!1.33e-12!52;CL:0000048!2.22e-12!430;CL:0000034!2.83e-12!444;CL:0000791!3.84e-12!18;CL:0000789!3.84e-12!18;CL:0002420!3.84e-12!18;CL:0002419!3.84e-12!18;CL:0000790!3.84e-12!18;CL:0000723!1.36e-11!436;CL:0000084!2.17e-11!25;CL:0000827!2.17e-11!25;CL:0002393!1.90e-10!9;CL:0002397!1.90e-10!9;CL:0000094!8.69e-09!8;CL:0000081!3.29e-07!11;CL:0000624!3.63e-07!6|ontology_enrichment_celltype_v019=CL:0000791;4.48e-22;18!CL:0000789;4.48e-22;18!CL:0002419;4.48e-22;18!CL:0000094;3.25e-18;8!CL:0000081;7.55e-16;11!CL:0000766;1.50e-15;69!CL:0002393;4.85e-15;6!CL:0002397;4.85e-15;6!CL:0000084;7.68e-15;25!CL:0000576;8.86e-15;48!CL:0000624;1.68e-14;6!CL:0000860;4.17e-13;33!CL:0002057;4.17e-13;33!CL:0002087;9.68e-13;104!CL:0000451;7.37e-12;10!CL:0000625;1.03e-11;11!CL:0000738;1.93e-11;136!CL:0000453;5.29e-11;5!CL:0000473;6.06e-10;39!CL:0000234;6.06e-10;39!CL:0000542;5.87e-09;53!CL:0000988;1.07e-08;177!CL:0000875;1.07e-08;3!CL:0002396;1.07e-08;3!CL:0000623;1.86e-08;3!CL:0000990;2.54e-08;8!CL:0000898;3.37e-08;3!CL:0000767;3.66e-08;3!CL:0000226;5.57e-08;3!CL:0000842;5.57e-08;3!CL:0000784;1.46e-07;3!CL:0000775;1.46e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,1.41e-65,136;CL:0000037,2.57e-51,168;CL:0000988,1.92e-49,177;CL:0002032,2.39e-43,161;CL:0000837,2.39e-43,161;CL:0002031,1.13e-40,120;CL:0002087,1.98e-39,115;CL:0000766,1.01e-34,72;CL:0000860,1.91e-29,42;CL:0002057,1.91e-29,42;CL:0000763,9.67e-27,108;CL:0000049,9.67e-27,108;CL:0000557,3.03e-25,67;CL:0000473,8.41e-25,48;CL:0000234,8.41e-25,48;CL:0002009,7.51e-23,61;CL:0000791,4.22e-22,18;CL:0000789,4.22e-22,18;CL:0002420,4.22e-22,18;CL:0002419,4.22e-22,18;CL:0000790,4.22e-22,18;CL:0002393,4.69e-22,9;CL:0002397,4.69e-22,9;CL:0000839,6.39e-22,66;CL:0002194,4.99e-20,59;CL:0000576,4.99e-20,59;CL:0000040,4.99e-20,59;CL:0000559,4.99e-20,59;CL:0000094,3.19e-18,8;CL:0000134,8.55e-18,354;CL:0002320,4.32e-17,361;CL:0000081,6.11e-16,11;CL:0000838,3.03e-15,52;CL:0000084,7.36e-15,25;CL:0000827,7.36e-15,25;CL:0000542,7.65e-15,53;CL:0000051,7.65e-15,53;CL:0000219,1.27e-14,386;CL:0000624,1.70e-14,6;CL:0000034,3.40e-13,441;CL:0000048,7.22e-13,427;CL:0000723,1.96e-12,433;CL:0000451,6.59e-12,10;CL:0000625,9.66e-12,11;CL:0000453,4.32e-11,5;CL:0000875,1.08e-08,3;CL:0002396,1.08e-08,3;CL:0000623,1.75e-08,3;CL:0000825,1.75e-08,3;CL:0000990,2.18e-08,8;CL:0000898,3.42e-08,3;CL:0000767,3.75e-08,3;CL:0000226,5.59e-08,3;CL:0000842,5.59e-08,3;CL:0000775,1.37e-07,3;CL:0000784,1.53e-07,3|ontology_enrichment_development_v019=CL:0000790;4.48e-22;18!CL:0002057;1.97e-20;42!CL:0000051;5.87e-09;53!CL:0000049;1.21e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!2.35e-19!86;UBERON:0002390!2.40e-19!102;UBERON:0003061!2.40e-19!102;UBERON:0002371!2.81e-19!80;UBERON:0002384!1.03e-16!375;UBERON:0002193!1.20e-15!112;UBERON:0004765!2.83e-14!101;UBERON:0001434!2.83e-14!101;UBERON:0002405!7.24e-14!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.04e-22,76;UBERON:0002390,1.40e-22,98;UBERON:0003061,1.40e-22,98;UBERON:0001474,2.19e-20,82;UBERON:0002193,1.59e-19,108;UBERON:0002405,2.26e-18,93;UBERON:0004765,8.88e-18,90;UBERON:0002384,3.92e-16,371;UBERON:0001434,4.04e-15,100;UBERON:0002204,5.94e-07,167|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0.0787107813136792,20.454942396143,11.1310525448192,4.64448369948228,0,0.30120591877825,0.369754010166788,0,0,1.17440175733939,19.9438347071476,10.0272223735071,11.718587018656,0,0,0,0.436194716338694,0.377875943688809,1.4555043671269,1.16214518452842,0,0.309706370895104,0.863077176966451,0.768482119587302,0.47296445977717,1.72372840368309,2.5819387343353,1.35426486594342,0.376484679085209,0.272906150057846,1.12361742222542,3.97909060082173,2.88836124368484,3.19668562899521,0,1.39624560335142,1.27867425159808,1.45104619314292,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,1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0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.186224142887574,0.112131862580613,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0.320568492303233|short_description=p3@KLHL21}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9903 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29041 | |||
|TSSclassifier=S | |||
|UniProt=Q2NKK7 | |||
|association_with_transcript=0bp_to_ENST00000505933_5end | |||
|coexpression_cluster_id=C1656 | |||
|description=CAGE_peak_3_at_KLHL21_5end | |||
|id=chr1:6663744..6663762,- | |||
|ontology_enrichment_celltype=CL:0000738!1.79e-46!140;CL:0000037!9.96e-38!172;CL:0000566!9.96e-38!172;CL:0000988!2.62e-35!182;CL:0002031!1.40e-34!124;CL:0002032!1.06e-33!165;CL:0000837!1.06e-33!165;CL:0002087!1.81e-32!119;CL:0002057!8.35e-29!42;CL:0000860!9.83e-26!45;CL:0000766!2.75e-25!76;CL:0000557!4.02e-20!71;CL:0000839!4.61e-20!70;CL:0000763!7.47e-20!112;CL:0000049!7.47e-20!112;CL:0002009!1.25e-18!65;CL:0000134!2.32e-18!358;CL:0002194!4.05e-17!63;CL:0000576!4.05e-17!63;CL:0000040!4.05e-17!63;CL:0000559!4.05e-17!63;CL:0002320!4.09e-17!365;CL:0000219!1.41e-15!390;CL:0000542!6.44e-13!53;CL:0000051!6.44e-13!53;CL:0000838!1.33e-12!52;CL:0000048!2.22e-12!430;CL:0000034!2.83e-12!444;CL:0000791!3.84e-12!18;CL:0000789!3.84e-12!18;CL:0002420!3.84e-12!18;CL:0002419!3.84e-12!18;CL:0000790!3.84e-12!18;CL:0000723!1.36e-11!436;CL:0000084!2.17e-11!25;CL:0000827!2.17e-11!25;CL:0002393!1.90e-10!9;CL:0002397!1.90e-10!9;CL:0000094!8.69e-09!8;CL:0000081!3.29e-07!11;CL:0000624!3.63e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.48e-22;18!CL:0000789;4.48e-22;18!CL:0002419;4.48e-22;18!CL:0000094;3.25e-18;8!CL:0000081;7.55e-16;11!CL:0000766;1.50e-15;69!CL:0002393;4.85e-15;6!CL:0002397;4.85e-15;6!CL:0000084;7.68e-15;25!CL:0000576;8.86e-15;48!CL:0000624;1.68e-14;6!CL:0000860;4.17e-13;33!CL:0002057;4.17e-13;33!CL:0002087;9.68e-13;104!CL:0000451;7.37e-12;10!CL:0000625;1.03e-11;11!CL:0000738;1.93e-11;136!CL:0000453;5.29e-11;5!CL:0000473;6.06e-10;39!CL:0000234;6.06e-10;39!CL:0000542;5.87e-09;53!CL:0000988;1.07e-08;177!CL:0000875;1.07e-08;3!CL:0002396;1.07e-08;3!CL:0000623;1.86e-08;3!CL:0000990;2.54e-08;8!CL:0000898;3.37e-08;3!CL:0000767;3.66e-08;3!CL:0000226;5.57e-08;3!CL:0000842;5.57e-08;3!CL:0000784;1.46e-07;3!CL:0000775;1.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.41e-65,136;CL:0000037,2.57e-51,168;CL:0000988,1.92e-49,177;CL:0002032,2.39e-43,161;CL:0000837,2.39e-43,161;CL:0002031,1.13e-40,120;CL:0002087,1.98e-39,115;CL:0000766,1.01e-34,72;CL:0000860,1.91e-29,42;CL:0002057,1.91e-29,42;CL:0000763,9.67e-27,108;CL:0000049,9.67e-27,108;CL:0000557,3.03e-25,67;CL:0000473,8.41e-25,48;CL:0000234,8.41e-25,48;CL:0002009,7.51e-23,61;CL:0000791,4.22e-22,18;CL:0000789,4.22e-22,18;CL:0002420,4.22e-22,18;CL:0002419,4.22e-22,18;CL:0000790,4.22e-22,18;CL:0002393,4.69e-22,9;CL:0002397,4.69e-22,9;CL:0000839,6.39e-22,66;CL:0002194,4.99e-20,59;CL:0000576,4.99e-20,59;CL:0000040,4.99e-20,59;CL:0000559,4.99e-20,59;CL:0000094,3.19e-18,8;CL:0000134,8.55e-18,354;CL:0002320,4.32e-17,361;CL:0000081,6.11e-16,11;CL:0000838,3.03e-15,52;CL:0000084,7.36e-15,25;CL:0000827,7.36e-15,25;CL:0000542,7.65e-15,53;CL:0000051,7.65e-15,53;CL:0000219,1.27e-14,386;CL:0000624,1.70e-14,6;CL:0000034,3.40e-13,441;CL:0000048,7.22e-13,427;CL:0000723,1.96e-12,433;CL:0000451,6.59e-12,10;CL:0000625,9.66e-12,11;CL:0000453,4.32e-11,5;CL:0000875,1.08e-08,3;CL:0002396,1.08e-08,3;CL:0000623,1.75e-08,3;CL:0000825,1.75e-08,3;CL:0000990,2.18e-08,8;CL:0000898,3.42e-08,3;CL:0000767,3.75e-08,3;CL:0000226,5.59e-08,3;CL:0000842,5.59e-08,3;CL:0000775,1.37e-07,3;CL:0000784,1.53e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.48e-22;18!CL:0002057;1.97e-20;42!CL:0000051;5.87e-09;53!CL:0000049;1.21e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.35e-19!86;UBERON:0002390!2.40e-19!102;UBERON:0003061!2.40e-19!102;UBERON:0002371!2.81e-19!80;UBERON:0002384!1.03e-16!375;UBERON:0002193!1.20e-15!112;UBERON:0004765!2.83e-14!101;UBERON:0001434!2.83e-14!101;UBERON:0002405!7.24e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.04e-22,76;UBERON:0002390,1.40e-22,98;UBERON:0003061,1.40e-22,98;UBERON:0001474,2.19e-20,82;UBERON:0002193,1.59e-19,108;UBERON:0002405,2.26e-18,93;UBERON:0004765,8.88e-18,90;UBERON:0002384,3.92e-16,371;UBERON:0001434,4.04e-15,100;UBERON:0002204,5.94e-07,167 | |||
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| |||
|short_description=p3@KLHL21 | |||
}} |
Revision as of 06:31, 12 September 2013
Short description: | p3@KLHL21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KLHL21_5end |
Coexpression cluster: | C1656_CD14CD16_CD14_CD4_Basophils_CD8_Natural_immature |
Association with transcript: | 0bp_to_ENST00000505933_5end |
EntrezGene: | KLHL21 |
HGNC: | 29041 |
UniProt: | Q2NKK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.04e-22 | 76 |
hematopoietic system | 1.40e-22 | 98 |
blood island | 1.40e-22 | 98 |
bone element | 2.19e-20 | 82 |
hemolymphoid system | 1.59e-19 | 108 |
immune system | 2.26e-18 | 93 |
skeletal element | 8.88e-18 | 90 |
connective tissue | 3.92e-16 | 371 |
skeletal system | 4.04e-15 | 100 |
musculoskeletal system | 5.94e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.