FFCP PHASE1:Hg19::chr1:40851288..40851322,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1852|description=CAGE_peak_at_chr1:40851288..40851322,-|id=chr1:40851288..40851322,-|ontology_enrichment_celltype=CL:0000738!2.63e-58!140;CL:0000037!3.43e-47!172;CL:0000566!3.43e-47!172;CL:0000988!1.13e-46!182;CL:0002032!1.38e-41!165;CL:0000837!1.38e-41!165;CL:0000838!4.72e-41!52;CL:0002031!1.80e-40!124;CL:0002087!2.36e-40!119;CL:0000542!5.49e-40!53;CL:0000051!5.49e-40!53;CL:0000791!6.55e-23!18;CL:0000789!6.55e-23!18;CL:0002420!6.55e-23!18;CL:0002419!6.55e-23!18;CL:0000790!6.55e-23!18;CL:0000945!4.84e-19!24;CL:0000826!4.84e-19!24;CL:0000084!9.03e-19!25;CL:0000827!9.03e-19!25;CL:0000625!5.62e-16!11;CL:0000236!1.57e-14!14;CL:0000766!4.69e-13!76;CL:0000134!6.88e-13!358;CL:0000094!1.39e-12!8;CL:0002320!3.78e-12!365;CL:0002393!1.36e-11!9;CL:0002397!1.36e-11!9;CL:0000763!9.25e-11!112;CL:0000049!9.25e-11!112;CL:0000081!1.08e-10!11;CL:0000624!2.82e-10!6;CL:0000219!1.35e-09!390;CL:0002057!2.04e-08!42;CL:0000557!2.35e-08!71;CL:0000080!4.56e-08!6;CL:0000860!1.70e-07!45;CL:0002009!2.37e-07!65;CL:0000034!3.02e-07!444;CL:0000048!4.97e-07!430;CL:0000451!5.23e-07!10;CL:0000839!5.89e-07!70;CL:0000453!8.63e-07!5|ontology_enrichment_celltype_v019=CL:0000791;2.62e-39;18!CL:0000789;2.62e-39;18!CL:0002419;2.62e-39;18!CL:0000084;3.16e-30;25!CL:0000625;8.93e-27;11!CL:0000542;2.01e-26;53!CL:0000236;4.43e-23;13!CL:0000094;8.64e-21;8!CL:0000081;3.51e-18;11!CL:0000624;9.68e-17;6!CL:0000945;2.74e-11;24!CL:0002087;3.16e-11;104!CL:0002393;7.40e-10;6!CL:0002397;7.40e-10;6!CL:0000738;7.54e-10;136!CL:0000775;1.13e-09;3!CL:0000623;2.74e-09;3!CL:0000898;3.50e-09;3!CL:0000226;1.39e-08;3!CL:0000842;1.39e-08;3!CL:0000988;4.78e-08;177!CL:0000767;6.26e-08;3!CL:0000784;9.97e-08;3|ontology_enrichment_celltype_v019_2=CL:0000738,2.85e-56,136;CL:0000838,9.84e-45,52;CL:0000542,1.04e-43,53;CL:0000051,1.04e-43,53;CL:0000037,1.17e-42,168;CL:0000988,2.90e-41,177;CL:0000791,2.66e-39,18;CL:0000789,2.66e-39,18;CL:0002420,2.66e-39,18;CL:0002419,2.66e-39,18;CL:0000790,2.66e-39,18;CL:0002087,2.45e-37,115;CL:0002031,9.27e-37,120;CL:0002032,1.62e-36,161;CL:0000837,1.62e-36,161;CL:0000084,3.22e-30,25;CL:0000827,3.22e-30,25;CL:0000625,9.65e-27,11;CL:0000236,2.60e-21,14;CL:0000094,8.43e-21,8;CL:0000081,3.66e-18,11;CL:0000624,9.07e-17,6;CL:0000134,2.55e-12,354;CL:0002393,4.14e-12,9;CL:0002397,4.14e-12,9;CL:0002320,8.49e-12,361;CL:0000945,2.50e-11,24;CL:0000826,2.50e-11,24;CL:0000766,1.45e-10,72;CL:0000219,5.70e-10,386;CL:0000775,1.11e-09,3;CL:0000623,2.82e-09,3;CL:0000825,2.82e-09,3;CL:0000898,3.32e-09,3;CL:0000226,1.49e-08,3;CL:0000842,1.49e-08,3;CL:0000034,4.07e-08,441;CL:0000767,5.96e-08,3;CL:0000784,8.83e-08,3;CL:0000048,9.05e-08,427;CL:0000723,1.80e-07,433;CL:0000763,7.29e-07,108;CL:0000049,7.29e-07,108|ontology_enrichment_development_v019=CL:0000790;2.62e-39;18!CL:0000051;2.01e-26;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.65e-17!102;UBERON:0003061!4.65e-17!102;UBERON:0002193!4.34e-16!112;UBERON:0002384!3.77e-11!375;UBERON:0000178!6.35e-09!15;UBERON:0000179!6.35e-09!15;UBERON:0000463!6.35e-09!15;UBERON:0002405!2.66e-08!115;UBERON:0002371!6.04e-08!80;UBERON:0001474!7.35e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.35e-11,371;UBERON:0002390,1.53e-08,98;UBERON:0003061,1.53e-08,98;UBERON:0002193,5.00e-08,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.157421562627358,5.90046415273356,5.37361157336098,1.39334510984468,0,0,0,0.0774672005803016,0,0.880801318004542,3.87796785972314,2.80762226458198,3.68918480216948,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0.709446689665756,0,0,1.35426486594342,0,0,0,0.612167784741805,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,1.47878700418359,4.889898899196,0.628975936525128,1.46027220490444,1.35159203557356,1.44653028027372,1.71007646244749,0.59675003159727,1.27864907635244,15.839662001519,9.83049500271837,15.1216573156804,1.70692089026603,24.8245511962328,12.6445536789986,7.93253847341835,14.3108063180305,7.96898156753228,6.45960908308033,8.02773779062981,2.64342657158052,3.36305137788922,0.526768169550154,20.2611063217248,11.7903228824749,13.1584959359686,0.167186495390678,12.71096839871,17.0441210064504,13.6378709885538,0.222820913770347,13.2572658363677,6.42448294292501,8.93652750424551,0.512365278902701,0.650296737799391,1.15106533222573,1.38175008892924,3.47763702882063,10.0834862950201,6.42097987415311,11.4989076185474,0.113309342697566,14.562378756873,8.24705869158312,7.59059076058509,5.73417745783374,7.1619179924206,14.2567806667256,2.40920190524436,3.83959833463255,12.4930726552346,4.73554504088034,8.21127996921047,11.4915843638097,8.8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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1852 | |||
|description=CAGE_peak_at_chr1:40851288..40851322,- | |||
|id=chr1:40851288..40851322,- | |||
|ontology_enrichment_celltype=CL:0000738!2.63e-58!140;CL:0000037!3.43e-47!172;CL:0000566!3.43e-47!172;CL:0000988!1.13e-46!182;CL:0002032!1.38e-41!165;CL:0000837!1.38e-41!165;CL:0000838!4.72e-41!52;CL:0002031!1.80e-40!124;CL:0002087!2.36e-40!119;CL:0000542!5.49e-40!53;CL:0000051!5.49e-40!53;CL:0000791!6.55e-23!18;CL:0000789!6.55e-23!18;CL:0002420!6.55e-23!18;CL:0002419!6.55e-23!18;CL:0000790!6.55e-23!18;CL:0000945!4.84e-19!24;CL:0000826!4.84e-19!24;CL:0000084!9.03e-19!25;CL:0000827!9.03e-19!25;CL:0000625!5.62e-16!11;CL:0000236!1.57e-14!14;CL:0000766!4.69e-13!76;CL:0000134!6.88e-13!358;CL:0000094!1.39e-12!8;CL:0002320!3.78e-12!365;CL:0002393!1.36e-11!9;CL:0002397!1.36e-11!9;CL:0000763!9.25e-11!112;CL:0000049!9.25e-11!112;CL:0000081!1.08e-10!11;CL:0000624!2.82e-10!6;CL:0000219!1.35e-09!390;CL:0002057!2.04e-08!42;CL:0000557!2.35e-08!71;CL:0000080!4.56e-08!6;CL:0000860!1.70e-07!45;CL:0002009!2.37e-07!65;CL:0000034!3.02e-07!444;CL:0000048!4.97e-07!430;CL:0000451!5.23e-07!10;CL:0000839!5.89e-07!70;CL:0000453!8.63e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.62e-39;18!CL:0000789;2.62e-39;18!CL:0002419;2.62e-39;18!CL:0000084;3.16e-30;25!CL:0000625;8.93e-27;11!CL:0000542;2.01e-26;53!CL:0000236;4.43e-23;13!CL:0000094;8.64e-21;8!CL:0000081;3.51e-18;11!CL:0000624;9.68e-17;6!CL:0000945;2.74e-11;24!CL:0002087;3.16e-11;104!CL:0002393;7.40e-10;6!CL:0002397;7.40e-10;6!CL:0000738;7.54e-10;136!CL:0000775;1.13e-09;3!CL:0000623;2.74e-09;3!CL:0000898;3.50e-09;3!CL:0000226;1.39e-08;3!CL:0000842;1.39e-08;3!CL:0000988;4.78e-08;177!CL:0000767;6.26e-08;3!CL:0000784;9.97e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.85e-56,136;CL:0000838,9.84e-45,52;CL:0000542,1.04e-43,53;CL:0000051,1.04e-43,53;CL:0000037,1.17e-42,168;CL:0000988,2.90e-41,177;CL:0000791,2.66e-39,18;CL:0000789,2.66e-39,18;CL:0002420,2.66e-39,18;CL:0002419,2.66e-39,18;CL:0000790,2.66e-39,18;CL:0002087,2.45e-37,115;CL:0002031,9.27e-37,120;CL:0002032,1.62e-36,161;CL:0000837,1.62e-36,161;CL:0000084,3.22e-30,25;CL:0000827,3.22e-30,25;CL:0000625,9.65e-27,11;CL:0000236,2.60e-21,14;CL:0000094,8.43e-21,8;CL:0000081,3.66e-18,11;CL:0000624,9.07e-17,6;CL:0000134,2.55e-12,354;CL:0002393,4.14e-12,9;CL:0002397,4.14e-12,9;CL:0002320,8.49e-12,361;CL:0000945,2.50e-11,24;CL:0000826,2.50e-11,24;CL:0000766,1.45e-10,72;CL:0000219,5.70e-10,386;CL:0000775,1.11e-09,3;CL:0000623,2.82e-09,3;CL:0000825,2.82e-09,3;CL:0000898,3.32e-09,3;CL:0000226,1.49e-08,3;CL:0000842,1.49e-08,3;CL:0000034,4.07e-08,441;CL:0000767,5.96e-08,3;CL:0000784,8.83e-08,3;CL:0000048,9.05e-08,427;CL:0000723,1.80e-07,433;CL:0000763,7.29e-07,108;CL:0000049,7.29e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;2.62e-39;18!CL:0000051;2.01e-26;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.65e-17!102;UBERON:0003061!4.65e-17!102;UBERON:0002193!4.34e-16!112;UBERON:0002384!3.77e-11!375;UBERON:0000178!6.35e-09!15;UBERON:0000179!6.35e-09!15;UBERON:0000463!6.35e-09!15;UBERON:0002405!2.66e-08!115;UBERON:0002371!6.04e-08!80;UBERON:0001474!7.35e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.35e-11,371;UBERON:0002390,1.53e-08,98;UBERON:0003061,1.53e-08,98;UBERON:0002193,5.00e-08,108 | |||
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|short_description=p@chr1:40851288..40851322,- | |||
}} |
Revision as of 05:43, 12 September 2013
Short description: | p@chr1:40851288..40851322, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:40851288..40851322, - |
Coexpression cluster: | C1852_Neutrophils_CD19_CD4_Peripheral_Eosinophils_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.35e-11 | 371 |
hematopoietic system | 1.53e-08 | 98 |
blood island | 1.53e-08 | 98 |
hemolymphoid system | 5.00e-08 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.