FFCP PHASE1:Hg19::chr1:33219558..33219569,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57648|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29301|TSSclassifier=S|UniProt=|association_with_transcript=-50bp_to_ENST00000468130_5end|coexpression_cluster_id=C3971|description=CAGE_peak_5_at_KIAA1522_5end|id=chr1:33219558..33219569,+|ontology_enrichment_celltype=CL:0000066!2.09e-20!254;CL:0002076!1.66e-10!43;CL:0000223!3.66e-07!59;CL:0002368!3.74e-07!13|ontology_enrichment_celltype_v019=CL:0002076;7.89e-10;42!CL:0002368;1.72e-08;13!CL:0000163;3.70e-07;9!CL:0002202;5.02e-07;9!CL:0002632;5.02e-07;9|ontology_enrichment_celltype_v019_2=CL:0000066,6.40e-16,253;CL:0002076,1.65e-13,42;CL:0000223,4.33e-10,58;CL:0002368,1.52e-08,13;CL:0000163,4.64e-07,9;CL:0002202,5.64e-07,9;CL:0002632,5.64e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!3.00e-13!106;DOID:0050687!3.63e-13!143;DOID:1749!1.80e-08!14;DOID:299!3.91e-08!25;DOID:162!1.73e-07!235;DOID:14566!3.12e-07!239|ontology_enrichment_disease_v019=DOID:1749;7.94e-11;14!DOID:299;7.64e-08;25|ontology_enrichment_disease_v019_2=DOID:305,7.88e-12,106;DOID:0050687,9.37e-12,143;DOID:1749,3.72e-11,14;DOID:299,4.10e-08,25|ontology_enrichment_uberon=UBERON:0004121!4.90e-18!169;UBERON:0000924!4.37e-17!173;UBERON:0006601!4.37e-17!173;UBERON:0000033!2.07e-16!123;UBERON:0000153!2.18e-16!129;UBERON:0007811!2.18e-16!129;UBERON:0003075!2.97e-15!86;UBERON:0007284!2.97e-15!86;UBERON:0003056!7.33e-15!61;UBERON:0005743!3.26e-14!86;UBERON:0002346!6.21e-14!90;UBERON:0001017!1.42e-13!82;UBERON:0000073!1.65e-12!94;UBERON:0001016!1.65e-12!94;UBERON:0000955!2.13e-12!69;UBERON:0006238!2.13e-12!69;UBERON:0001049!2.51e-12!57;UBERON:0005068!2.51e-12!57;UBERON:0006241!2.51e-12!57;UBERON:0007135!2.51e-12!57;UBERON:0001869!1.58e-11!32;UBERON:0003080!1.92e-11!42;UBERON:0000475!3.33e-11!365;UBERON:0002616!4.52e-11!59;UBERON:0000064!6.46e-11!219;UBERON:0002780!7.06e-11!41;UBERON:0001890!7.06e-11!41;UBERON:0006240!7.06e-11!41;UBERON:0000464!7.14e-11!104;UBERON:0001893!7.90e-11!34;UBERON:0002020!1.46e-10!34;UBERON:0003528!1.46e-10!34;UBERON:0002791!2.77e-10!33;UBERON:0002619!1.27e-09!22;UBERON:0001950!4.61e-09!20;UBERON:0000956!6.75e-09!25;UBERON:0000203!6.75e-09!25;UBERON:0000062!9.13e-09!511;UBERON:0000481!9.56e-09!347;UBERON:0005153!1.36e-08!37;UBERON:0005178!3.05e-08!34;UBERON:0002224!3.05e-08!34;UBERON:0005157!4.69e-08!51;UBERON:0004119!6.34e-08!169;UBERON:0000925!6.34e-08!169;UBERON:0006595!6.34e-08!169;UBERON:0000466!1.00e-07!126;UBERON:0000119!1.02e-07!312;UBERON:0005181!1.05e-07!35;UBERON:0000483!1.43e-07!309;UBERON:0007023!1.81e-07!115;UBERON:0002048!3.68e-07!22;UBERON:0000117!3.68e-07!22;UBERON:0000171!3.68e-07!22;UBERON:0000170!3.68e-07!22;UBERON:0005597!3.68e-07!22;UBERON:0000118!3.68e-07!22|ontology_enrichment_uberon_v019=UBERON:0001869;2.11e-08;32!UBERON:0001950;3.10e-08;20!UBERON:0002619;3.28e-08;22!UBERON:0001893;6.72e-08;34!UBERON:0002791;1.12e-07;32!UBERON:0000956;9.27e-07;25!UBERON:0000203;9.27e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.75e-10,32;UBERON:0003056,2.40e-09,61;UBERON:0001893,4.16e-09,34;UBERON:0002780,4.94e-09,41;UBERON:0001890,4.94e-09,41;UBERON:0003080,4.94e-09,41;UBERON:0006240,4.94e-09,41;UBERON:0004121,7.17e-09,171;UBERON:0000924,7.17e-09,171;UBERON:0006601,7.17e-09,171;UBERON:0002791,7.51e-09,32;UBERON:0001017,9.70e-09,81;UBERON:0001950,1.55e-08,20;UBERON:0002619,1.58e-08,22;UBERON:0003528,5.24e-08,34;UBERON:0002020,5.24e-08,34;UBERON:0000955,1.05e-07,68;UBERON:0006238,1.05e-07,68;UBERON:0001016,1.85e-07,89;UBERON:0000956,5.00e-07,25;UBERON:0000203,5.00e-07,25;UBERON:0000073,5.76e-07,53;UBERON:0002616,5.76e-07,53;UBERON:0001049,8.06e-07,56;UBERON:0005068,8.06e-07,56;UBERON:0006241,8.06e-07,56;UBERON:0007135,8.06e-07,56|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,3.48900583986214,0.873765488520689,1.05506791291381,0.123766352960047,0.331397375727916,0,0,0,0,1.35433163884467,0.816002764977012,0.940364164434263,0.572471974262113,0,0.376627918784408,0,0,0,0,0,0.154816123316076,2.75826367343678,3.0120591877825,3.69754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0.472674085820339,0.665188192387692,0.87834785693126,0.654895377488563,4.00724817121796,2.59549109949101,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,7.41359888642308,0.496971951695318,0,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0.163461903113459,0.756787138224657,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309157587715317,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0.57978255948989,0.818238361772504,0.286804595389004,1.34171076742555,1.98794652482228,1.74290914304278,1.24393266018445,1.7662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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57648 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29301 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-50bp_to_ENST00000468130_5end | |||
|coexpression_cluster_id=C3971 | |||
|description=CAGE_peak_5_at_KIAA1522_5end | |||
|id=chr1:33219558..33219569,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.09e-20!254;CL:0002076!1.66e-10!43;CL:0000223!3.66e-07!59;CL:0002368!3.74e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.89e-10;42!CL:0002368;1.72e-08;13!CL:0000163;3.70e-07;9!CL:0002202;5.02e-07;9!CL:0002632;5.02e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.40e-16,253;CL:0002076,1.65e-13,42;CL:0000223,4.33e-10,58;CL:0002368,1.52e-08,13;CL:0000163,4.64e-07,9;CL:0002202,5.64e-07,9;CL:0002632,5.64e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.00e-13!106;DOID:0050687!3.63e-13!143;DOID:1749!1.80e-08!14;DOID:299!3.91e-08!25;DOID:162!1.73e-07!235;DOID:14566!3.12e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.94e-11;14!DOID:299;7.64e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.88e-12,106;DOID:0050687,9.37e-12,143;DOID:1749,3.72e-11,14;DOID:299,4.10e-08,25 | |||
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| |||
|short_description=p5@KIAA1522 | |||
}} |
Revision as of 05:20, 12 September 2013
Short description: | p5@KIAA1522 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_KIAA1522_5end |
Coexpression cluster: | C3971_Mast_breast_lung_Wilms_salivary_mesothelioma_oral |
Association with transcript: | -50bp_to_ENST00000468130_5end |
EntrezGene: | KIAA1522 |
HGNC: | 29301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.40e-16 | 253 |
endo-epithelial cell | 1.65e-13 | 42 |
endodermal cell | 4.33e-10 | 58 |
respiratory epithelial cell | 1.52e-08 | 13 |
endocrine cell | 4.64e-07 | 9 |
epithelial cell of tracheobronchial tree | 5.64e-07 | 9 |
epithelial cell of lower respiratory tract | 5.64e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 4.75e-10 | 32 |
pre-chordal neural plate | 2.40e-09 | 61 |
telencephalon | 4.16e-09 | 34 |
regional part of forebrain | 4.94e-09 | 41 |
forebrain | 4.94e-09 | 41 |
anterior neural tube | 4.94e-09 | 41 |
future forebrain | 4.94e-09 | 41 |
ectoderm-derived structure | 7.17e-09 | 171 |
ectoderm | 7.17e-09 | 171 |
presumptive ectoderm | 7.17e-09 | 171 |
regional part of telencephalon | 7.51e-09 | 32 |
central nervous system | 9.70e-09 | 81 |
neocortex | 1.55e-08 | 20 |
regional part of cerebral cortex | 1.58e-08 | 22 |
brain grey matter | 5.24e-08 | 34 |
gray matter | 5.24e-08 | 34 |
brain | 1.05e-07 | 68 |
future brain | 1.05e-07 | 68 |
nervous system | 1.85e-07 | 89 |
cerebral cortex | 5.00e-07 | 25 |
pallium | 5.00e-07 | 25 |
regional part of nervous system | 5.76e-07 | 53 |
regional part of brain | 5.76e-07 | 53 |
neural tube | 8.06e-07 | 56 |
neural rod | 8.06e-07 | 56 |
future spinal cord | 8.06e-07 | 56 |
neural keel | 8.06e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.88e-12 | 106 |
cell type cancer | 9.37e-12 | 143 |
squamous cell carcinoma | 3.72e-11 | 14 |
adenocarcinoma | 4.10e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.