FFCP PHASE1:Hg19::chr1:29241027..29241095,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2035|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3377|TSSclassifier=S|UniProt=P11171,Q4VB86|association_with_transcript=0bp_to_ENST00000373797,NM_001166006,uc001brk.2,uc001brl.1,uc009vtk.1_5end|coexpression_cluster_id=C3965|description=CAGE_peak_2_at_EPB41_5end|id=chr1:29241027..29241095,+|ontology_enrichment_celltype=CL:0000037!5.62e-23!172;CL:0000566!5.62e-23!172;CL:0000988!1.17e-20!182;CL:0002032!1.80e-20!165;CL:0000837!1.80e-20!165;CL:0000542!1.75e-18!53;CL:0000051!1.75e-18!53;CL:0000838!4.07e-18!52;CL:0000738!3.72e-16!140;CL:0002087!1.87e-14!119;CL:0000791!3.74e-12!18;CL:0000789!3.74e-12!18;CL:0002420!3.74e-12!18;CL:0002419!3.74e-12!18;CL:0000790!3.74e-12!18;CL:0002031!4.10e-11!124;CL:0000084!1.60e-10!25;CL:0000827!1.60e-10!25;CL:0000625!3.92e-08!11;CL:0000236!1.55e-07!14;CL:0000945!2.01e-07!24;CL:0000826!2.01e-07!24|ontology_enrichment_celltype_v019=CL:0000791;4.06e-13;18!CL:0000789;4.06e-13;18!CL:0002419;4.06e-13;18!CL:0000542;3.53e-12;53!CL:0000084;1.33e-11;25!CL:0000625;9.71e-09;11!CL:0000236;3.80e-08;13!CL:0000945;8.77e-08;24|ontology_enrichment_celltype_v019_2=CL:0000037,3.53e-22,168;CL:0000988,1.59e-20,177;CL:0000542,5.32e-20,53;CL:0000051,5.32e-20,53;CL:0000838,1.33e-19,52;CL:0002032,1.43e-19,161;CL:0000837,1.43e-19,161;CL:0000738,2.78e-15,136;CL:0002087,7.47e-14,115;CL:0000791,4.59e-13,18;CL:0000789,4.59e-13,18;CL:0002420,4.59e-13,18;CL:0002419,4.59e-13,18;CL:0000790,4.59e-13,18;CL:0000084,1.56e-11,25;CL:0000827,1.56e-11,25;CL:0002031,3.59e-10,120;CL:0000625,1.06e-08,11;CL:0000236,4.74e-08,14;CL:0000945,8.74e-08,24;CL:0000826,8.74e-08,24|ontology_enrichment_development_v019=CL:0000790;4.06e-13;18!CL:0000051;3.53e-12;53|ontology_enrichment_disease=DOID:2531!4.73e-08!51;DOID:0060083!4.73e-08!51;DOID:1240!2.69e-07!39;DOID:3095!3.76e-07!22;DOID:2994!3.76e-07!22|ontology_enrichment_disease_v019=DOID:3095;3.20e-07;22!DOID:2994;3.20e-07;22|ontology_enrichment_disease_v019_2=DOID:2531,7.79e-08,51;DOID:0060083,7.79e-08,51;DOID:1240,2.38e-07,39;DOID:3095,2.68e-07,22;DOID:2994,2.68e-07,22|ontology_enrichment_uberon=UBERON:0007023!4.13e-08!115;UBERON:0000178!4.80e-08!15;UBERON:0000179!4.80e-08!15;UBERON:0000463!4.80e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.45e-08;15!UBERON:0000179;1.45e-08;15!UBERON:0000463;1.45e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.33e-08,15;UBERON:0000179,1.33e-08,15;UBERON:0000463,1.33e-08,15;UBERON:0007023,4.32e-07,114|phase1_expression=0,0.428201047781966,0.563817616383885,0,0.893922188854576,0,0,0.631719873426831,2.61185628199839,0.491467873003018,0,0.436882744260345,0,0.247532705920093,0,0,0,0,0,0.984968464614303,0.612002073732759,0.940364164434263,0.85870796139317,2.18999080116615,3.13856598987007,4.50839093912912,5.66494067204626,6.0607301611533,14.9478425202584,24.1812520801244,13.3141866051825,0,0,0,6.89458085164684,3.9807385096478,7.63361142270603,13.2958898047651,11.4310335057981,17.3608696572681,7.61312612415743,23.6442376193855,10.0454471377333,1.59938062657521,2.64513160582167,2.42584061187816,1.62700325833979,1.23350366406548,1.85823822537062,1.1507695692886,2.56160706529101,2.36482229888585,1.72372840368309,4.51839278508678,2.70852973188684,1.31769637679823,1.91034305040492,0.674170453335254,1.22433556948361,2.56743221660875,3.19668562899521,2.96866170168044,1.59570926097305,2.13112375266347,1.7412554317715,1.13477044938228,1.86846674698672,2.26123798731069,2.08593167368081,1.52032191293582,1.21079900526674,2.57794345191295,2.53169909952708,0.633765858935825,1.91343869968539,1.46761051855863,3.14520167210186,3.45406853535464,9.32208402843065,1.14005097496499,1.19350006319454,1.64397738388171,33.4392864476513,27.8530691743687,24.016749854316,22.1899715734584,30.0296990277009,27.0133646778607,15.8650769468367,20.989182599778,35.2912040847858,33.4725197941435,43.9614212344013,5.28685314316103,9.52864557068611,9.48182705190277,58.0293821835808,49.9123668691439,58.3908257158606,33.771672068917,46.6068841286034,35.0351376243703,50.6549493860569,21.6136286357237,34.4688911745559,36.7746265008811,67.7009659412539,26.8991771423918,29.2633532009726,22.1991171214963,19.0681512272235,17.3881851441032,49.6759986592902,59.1265230078266,57.4945380927372,20.0557536574692,41.3878133090075,39.1735287850198,54.6522534762126,47.7848121486145,45.5758417699493,38.018081777935,50.5932400101317,51.1946444617674,63.7146705416964,47.5922276608474,52.552191802947,36.0876070372271,36.1044264307735,41.5646039143633,2.43806866313962,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.434539556882471,0,0,1.60709189178915,0.443458794925128,0.87834785693126,5.04269440666194,0,0,0.649094787309367,0.522389211897802,0.398873881556595,6.67773748054957,5.71994910780128,8.54352253057999,1.78886166630035,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0.775250277507987,1.06729878806013,1.33888245105868,0.805658634218294,0,0.732186172644509,1.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3377 | |||
|TSSclassifier=S | |||
|UniProt=P11171,Q4VB86 | |||
|association_with_transcript=0bp_to_ENST00000373797,NM_001166006,uc001brk.2,uc001brl.1,uc009vtk.1_5end | |||
|coexpression_cluster_id=C3965 | |||
|description=CAGE_peak_2_at_EPB41_5end | |||
|id=chr1:29241027..29241095,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.62e-23!172;CL:0000566!5.62e-23!172;CL:0000988!1.17e-20!182;CL:0002032!1.80e-20!165;CL:0000837!1.80e-20!165;CL:0000542!1.75e-18!53;CL:0000051!1.75e-18!53;CL:0000838!4.07e-18!52;CL:0000738!3.72e-16!140;CL:0002087!1.87e-14!119;CL:0000791!3.74e-12!18;CL:0000789!3.74e-12!18;CL:0002420!3.74e-12!18;CL:0002419!3.74e-12!18;CL:0000790!3.74e-12!18;CL:0002031!4.10e-11!124;CL:0000084!1.60e-10!25;CL:0000827!1.60e-10!25;CL:0000625!3.92e-08!11;CL:0000236!1.55e-07!14;CL:0000945!2.01e-07!24;CL:0000826!2.01e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.06e-13;18!CL:0000789;4.06e-13;18!CL:0002419;4.06e-13;18!CL:0000542;3.53e-12;53!CL:0000084;1.33e-11;25!CL:0000625;9.71e-09;11!CL:0000236;3.80e-08;13!CL:0000945;8.77e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.53e-22,168;CL:0000988,1.59e-20,177;CL:0000542,5.32e-20,53;CL:0000051,5.32e-20,53;CL:0000838,1.33e-19,52;CL:0002032,1.43e-19,161;CL:0000837,1.43e-19,161;CL:0000738,2.78e-15,136;CL:0002087,7.47e-14,115;CL:0000791,4.59e-13,18;CL:0000789,4.59e-13,18;CL:0002420,4.59e-13,18;CL:0002419,4.59e-13,18;CL:0000790,4.59e-13,18;CL:0000084,1.56e-11,25;CL:0000827,1.56e-11,25;CL:0002031,3.59e-10,120;CL:0000625,1.06e-08,11;CL:0000236,4.74e-08,14;CL:0000945,8.74e-08,24;CL:0000826,8.74e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000790;4.06e-13;18!CL:0000051;3.53e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!4.73e-08!51;DOID:0060083!4.73e-08!51;DOID:1240!2.69e-07!39;DOID:3095!3.76e-07!22;DOID:2994!3.76e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.20e-07;22!DOID:2994;3.20e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.79e-08,51;DOID:0060083,7.79e-08,51;DOID:1240,2.38e-07,39;DOID:3095,2.68e-07,22;DOID:2994,2.68e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.13e-08!115;UBERON:0000178!4.80e-08!15;UBERON:0000179!4.80e-08!15;UBERON:0000463!4.80e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.45e-08;15!UBERON:0000179;1.45e-08;15!UBERON:0000463;1.45e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.33e-08,15;UBERON:0000179,1.33e-08,15;UBERON:0000463,1.33e-08,15;UBERON:0007023,4.32e-07,114 | |||
|phase1_expression=0,0.428201047781966,0.563817616383885,0,0.893922188854576,0,0,0.631719873426831,2.61185628199839,0.491467873003018,0,0.436882744260345,0,0.247532705920093,0,0,0,0,0,0.984968464614303,0.612002073732759,0.940364164434263,0.85870796139317,2.18999080116615,3.13856598987007,4.50839093912912,5.66494067204626,6.0607301611533,14.9478425202584,24.1812520801244,13.3141866051825,0,0,0,6.89458085164684,3.9807385096478,7.63361142270603,13.2958898047651,11.4310335057981,17.3608696572681,7.61312612415743,23.6442376193855,10.0454471377333,1.59938062657521,2.64513160582167,2.42584061187816,1.62700325833979,1.23350366406548,1.85823822537062,1.1507695692886,2.56160706529101,2.36482229888585,1.72372840368309,4.51839278508678,2.70852973188684,1.31769637679823,1.91034305040492,0.674170453335254,1.22433556948361,2.56743221660875,3.19668562899521,2.96866170168044,1.59570926097305,2.13112375266347,1.7412554317715,1.13477044938228,1.86846674698672,2.26123798731069,2.08593167368081,1.52032191293582,1.21079900526674,2.57794345191295,2.53169909952708,0.633765858935825,1.91343869968539,1.46761051855863,3.14520167210186,3.45406853535464,9.32208402843065,1.14005097496499,1.19350006319454,1.64397738388171,33.4392864476513,27.8530691743687,24.016749854316,22.1899715734584,30.0296990277009,27.0133646778607,15.8650769468367,20.989182599778,35.2912040847858,33.4725197941435,43.9614212344013,5.28685314316103,9.52864557068611,9.48182705190277,58.0293821835808,49.9123668691439,58.3908257158606,33.771672068917,46.6068841286034,35.0351376243703,50.6549493860569,21.6136286357237,34.4688911745559,36.7746265008811,67.7009659412539,26.8991771423918,29.2633532009726,22.1991171214963,19.0681512272235,17.3881851441032,49.6759986592902,59.1265230078266,57.4945380927372,20.0557536574692,41.3878133090075,39.1735287850198,54.6522534762126,47.7848121486145,45.5758417699493,38.018081777935,50.5932400101317,51.1946444617674,63.7146705416964,47.5922276608474,52.552191802947,36.0876070372271,36.1044264307735,41.5646039143633,2.43806866313962,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.434539556882471,0,0,1.60709189178915,0.443458794925128,0.87834785693126,5.04269440666194,0,0,0.649094787309367,0.522389211897802,0.398873881556595,6.67773748054957,5.71994910780128,8.54352253057999,1.78886166630035,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0.775250277507987,1.06729878806013,1.33888245105868,0.805658634218294,0,0.732186172644509,1.10298924103761,0,2.50039239195423,3.14341121676638,4.27923625836624,4.5994991239765,1.89853131913626,1.09921046358244,65.8902087180316,62.0448422637321,0,0,0.379891534993739,0,0.860509862246441,1.77334191099179,0,0,0,1.55605517699883,0,0.653847612453835,0.302714855289863,0.576175924479999,2.10889288650417,0,0,0.149448680551801,2.70099346880659,2.42809416552197,3.08991774744947,0,1.22834317311768,0.929932030581889,0,0.494533858557114,0,0,1.0100166837244,3.00284447692714,0.554128230968366,0.438977620880838,0,0.150238058906597,0.113432183160021,0.717558542755448,0,0,0,0.618315175430633,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.508681776931463,0.193260853163297,0.272746120590835,0.573609190778008,10.245791314886,15.6385126619353,7.32021840077966,8.70752862129112,10.849796587652,16.4239811584123,0,0.643240938192885,0,0,0,1.77460200059766,2.19160097101532,1.68707720918437,0.882351781859152,1.96091499683166,1.42362371466658,0.943819157121151,1.17732879075208,1.92373578473195,0.738155454624648,1.40241773803446,0,0,0,0.982827216677626,1.77236972004421,21.1902287719032,0.860919069801795,0.514703430895577,0,0,0.100528972411631,0.0925884451585296,1.3032332212413,0,0,2.78232971940184,0.234817388471643,1.15493158208859,1.38895653772983,0.190254152234598,0.790204397959275,0.858486162094873,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.352193736052904,0.621984346622316,0.144119953416961,0.37872730027914,4.57184838903617,1.52795370223311,2.34434894420094,6.84289784090821,1.64523988325318,0.300343057843917,3.14409075893636,0.448524337381443,1.30788020649984,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0,0.285955987316295,0,0,0,0,2.37585561880029,0,0,0,1.2162378064119,1.00451418286425,0,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0,23.7620505266278,35.268506076145,38.5973358998536,41.9681728634777,0.76228387266739,7.8083912314573,3.09315525111078,2.51274398001523,5.10351001322531,69.657653227088,92.7400523532477,94.9011525768521,0.24538298343828,0,0.271265023699736,0.207970861530807,0,0.315404830067869,0,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0.737476674166813,0.260650843404249,0.195801157462741,0,38.6656208849799,28.689988708876,41.6237475433433,0,0,0.907170879989041,0,0.153461973288062,0,0.384417447767103,0,0.160853921143607,0,0.154209693802656,0,0.492762936082855,0,0,1.32945394550784,0.200506470303285,0.55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| |||
|short_description=p2@EPB41 | |||
}} |
Revision as of 05:09, 12 September 2013
Short description: | p2@EPB41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EPB41_5end |
Coexpression cluster: | C3965_cerebellum_CD4_pineal_small_merkel_Neutrophils_CD8 |
Association with transcript: | 0bp_to_ENST00000373797, NM_001166006, uc001brk.2, uc001brl.1, uc009vtk.1_5end |
EntrezGene: | EPB41 |
HGNC: | 3377 |
UniProt: | P11171Q4VB86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.53e-22 | 168 |
hematopoietic cell | 1.59e-20 | 177 |
lymphocyte | 5.32e-20 | 53 |
common lymphoid progenitor | 5.32e-20 | 53 |
lymphoid lineage restricted progenitor cell | 1.33e-19 | 52 |
hematopoietic oligopotent progenitor cell | 1.43e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-19 | 161 |
leukocyte | 2.78e-15 | 136 |
nongranular leukocyte | 7.47e-14 | 115 |
mature alpha-beta T cell | 4.59e-13 | 18 |
alpha-beta T cell | 4.59e-13 | 18 |
immature T cell | 4.59e-13 | 18 |
mature T cell | 4.59e-13 | 18 |
immature alpha-beta T cell | 4.59e-13 | 18 |
T cell | 1.56e-11 | 25 |
pro-T cell | 1.56e-11 | 25 |
hematopoietic lineage restricted progenitor cell | 3.59e-10 | 120 |
CD8-positive, alpha-beta T cell | 1.06e-08 | 11 |
B cell | 4.74e-08 | 14 |
lymphocyte of B lineage | 8.74e-08 | 24 |
pro-B cell | 8.74e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
blood | 1.33e-08 | 15 |
haemolymphatic fluid | 1.33e-08 | 15 |
organism substance | 1.33e-08 | 15 |
adult organism | 4.32e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.79e-08 | 51 |
immune system cancer | 7.79e-08 | 51 |
leukemia | 2.38e-07 | 39 |
germ cell and embryonal cancer | 2.68e-07 | 22 |
germ cell cancer | 2.68e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.