FFCP PHASE1:Hg19::chr1:236140858..236140883,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C932|description=CAGE_peak_at_chr1:236140858..236140883,-|id=chr1:236140858..236140883,-|ontology_enrichment_celltype=CL:0000057!3.95e-10!75;CL:0000055!2.44e-09!180;CL:0002620!2.48e-07!23;CL:0000136!7.57e-07!15|ontology_enrichment_celltype_v019=CL:0000136;2.21e-22;13!CL:0002521;5.54e-15;3!CL:0002615;5.54e-15;3!CL:0002195;1.06e-10;2!CL:0002571;1.06e-10;2!CL:0002617;1.06e-10;2|ontology_enrichment_celltype_v019_2=CL:0000136,2.38e-19,15;CL:0002521,3.24e-15,3;CL:0002615,5.23e-15,3;CL:0002617,1.12e-10,2;CL:0002195,1.49e-10,2;CL:0002571,1.49e-10,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004457!5.64e-08!12;UBERON:0000042!5.64e-08!12;UBERON:0003102!3.68e-07!95|ontology_enrichment_uberon_v019=UBERON:0002190;5.54e-15;3!UBERON:0003688;7.00e-13;6!UBERON:0002358;7.00e-13;6!UBERON:0003684;7.00e-13;6!UBERON:0001178;7.00e-13;6!UBERON:0002072;3.53e-09;5!UBERON:0004457;1.29e-08;9!UBERON:0000042;1.29e-08;9!UBERON:0000310;6.46e-08;10!UBERON:0001443;3.37e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.24e-15,3;UBERON:0003688,1.09e-12,6;UBERON:0002358,1.09e-12,6;UBERON:0003684,1.09e-12,6;UBERON:0001178,1.09e-12,6;UBERON:0002072,2.58e-09,5;UBERON:0000310,6.99e-08,10;UBERON:0001443,3.62e-07,11|phase1_expression=1.2717486548939,2.14100523890983,2.53717927372748,1.0007329835313,1.78784437770915,0.872338524100369,2.53299878168311,1.26343974685366,1.56711376919903,0,0,0,0,0.123766352960047,0.662794751455832,1.34465029290355,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.579386075843295,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0.775250277507987,0,0,0.805658634218294,0.760272105718513,1.70843440283719,0,0,0.446498641420399,0,0,0,0,0,0,0,0,0,0.379891534993739,0,1.43418310374407,1.06400514659507,0,0,0.49333509683432,0,0.134710672069688,0.490385709340376,1.51357427644931,0.576175924479999,0,1.5608003841516,0,0.747243402759005,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0.336672227908132,0,0.277064115484183,0,0,0.45071417671979,0.113432183160021,0.358779271377724,0.85422955527427,0.423863802319124,0.300091096084402,0.412210116953756,0.257640540045629,0.744467425326359,0.506328996723799,0.389748020644795,0,0.184099797284599,0.323292113637624,0.710019185033229,0.10075209822764,0.67824236924195,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.2933531432838,0,0,0.845302752556,0.797814349754612,3.12022310734098,0.257207374262142,0,0.532844358032199,2.57360388584666,9.76718889704597,0,0.325736184293735,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0,0.173767228936166,0.587403472388222,1.37257369524342,0.206768026122887,0,0,0,0,0,1.24053903909388,0.153461973288062,0.280660094433074,0.384417447767103,1.02341449813341,0.804269605718038,0,0,0,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0.0920809889358963,0.918515585316854,0.546273504020151,0.655622074797121,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.431831832204279,3.08454505380579,0.541892875087706,0,0,0,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0.290012154876366,0.308097234229289,0.307007349452259,0.137836572484531,0.322260734604821,0.290033387828457,0.170453254832202,0.712256285173899,0,0,0,0,0,0.94443704049192,0,0.616067160352178,0,0,0,0,0.744316738719335,0.316379424718726,0.571890581771475,0,0,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0.202182481573316,0,0,0,0.487426979262569,0,0.9554993798559,1.27264888758341,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.844430541190656,0.658589785919804,0.75894634753143,0.349934720244983,0,0,0,1.22386941009813,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C932 | |||
|description=CAGE_peak_at_chr1:236140858..236140883,- | |||
|id=chr1:236140858..236140883,- | |||
|ontology_enrichment_celltype=CL:0000057!3.95e-10!75;CL:0000055!2.44e-09!180;CL:0002620!2.48e-07!23;CL:0000136!7.57e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.21e-22;13!CL:0002521;5.54e-15;3!CL:0002615;5.54e-15;3!CL:0002195;1.06e-10;2!CL:0002571;1.06e-10;2!CL:0002617;1.06e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.38e-19,15;CL:0002521,3.24e-15,3;CL:0002615,5.23e-15,3;CL:0002617,1.12e-10,2;CL:0002195,1.49e-10,2;CL:0002571,1.49e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!5.64e-08!12;UBERON:0000042!5.64e-08!12;UBERON:0003102!3.68e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;5.54e-15;3!UBERON:0003688;7.00e-13;6!UBERON:0002358;7.00e-13;6!UBERON:0003684;7.00e-13;6!UBERON:0001178;7.00e-13;6!UBERON:0002072;3.53e-09;5!UBERON:0004457;1.29e-08;9!UBERON:0000042;1.29e-08;9!UBERON:0000310;6.46e-08;10!UBERON:0001443;3.37e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.24e-15,3;UBERON:0003688,1.09e-12,6;UBERON:0002358,1.09e-12,6;UBERON:0003684,1.09e-12,6;UBERON:0001178,1.09e-12,6;UBERON:0002072,2.58e-09,5;UBERON:0000310,6.99e-08,10;UBERON:0001443,3.62e-07,11 | |||
|phase1_expression=1.2717486548939,2.14100523890983,2.53717927372748,1.0007329835313,1.78784437770915,0.872338524100369,2.53299878168311,1.26343974685366,1.56711376919903,0,0,0,0,0.123766352960047,0.662794751455832,1.34465029290355,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.579386075843295,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0.775250277507987,0,0,0.805658634218294,0.760272105718513,1.70843440283719,0,0,0.446498641420399,0,0,0,0,0,0,0,0,0,0.379891534993739,0,1.43418310374407,1.06400514659507,0,0,0.49333509683432,0,0.134710672069688,0.490385709340376,1.51357427644931,0.576175924479999,0,1.5608003841516,0,0.747243402759005,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0.336672227908132,0,0.277064115484183,0,0,0.45071417671979,0.113432183160021,0.358779271377724,0.85422955527427,0.423863802319124,0.300091096084402,0.412210116953756,0.257640540045629,0.744467425326359,0.506328996723799,0.389748020644795,0,0.184099797284599,0.323292113637624,0.710019185033229,0.10075209822764,0.67824236924195,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.2933531432838,0,0,0.845302752556,0.797814349754612,3.12022310734098,0.257207374262142,0,0.532844358032199,2.57360388584666,9.76718889704597,0,0.325736184293735,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0,0.173767228936166,0.587403472388222,1.37257369524342,0.206768026122887,0,0,0,0,0,1.24053903909388,0.153461973288062,0.280660094433074,0.384417447767103,1.02341449813341,0.804269605718038,0,0,0,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0.0920809889358963,0.918515585316854,0.546273504020151,0.655622074797121,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.431831832204279,3.08454505380579,0.541892875087706,0,0,0,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0.290012154876366,0.308097234229289,0.307007349452259,0.137836572484531,0.322260734604821,0.290033387828457,0.170453254832202,0.712256285173899,0,0,0,0,0,0.94443704049192,0,0.616067160352178,0,0,0,0,0.744316738719335,0.316379424718726,0.571890581771475,0,0,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0.202182481573316,0,0,0,0.487426979262569,0,0.9554993798559,1.27264888758341,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.844430541190656,0.658589785919804,0.75894634753143,0.349934720244983,0,0,0,1.22386941009813,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0,0.23056390438806,0.987334088507493,0.54323685961004,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,1.22206028986725,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.126373159256976,0,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.543616824294456,0.209205692624666,0,0.866851769704557,0,0,0,0,0,0,0.229160424011684,0,0.399358000997982,1.71690419254628,0.223171457441873,0.268733889946905,0.360299883542404,0,0,0.0824158583811665,0.202210631562555,0.196854963029498,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0.236417121897595,0.367182116944987,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,1.17241786942466,0,0,0,0,0,0.427149650270779,0.314408610199332,0,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0.276697269872462,0,0.303298235083296,0,0.235265819698172,0,0,0.298509605773748,0,0,0,0.251567901752575,0,0.457680136793847,0.151230923763239,0,0,0.318593534327405,0,0,0.414706207840855,0,1.04349012362347,0.300515217994437,0,0.406870733204662,0.363697318405119,0,0.464033759878494,0.398095888698616,0,0,0.336749488765919,0,0,0.214441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| |||
|short_description=p@chr1:236140858..236140883,- | |||
}} |
Revision as of 04:24, 12 September 2013
Short description: | p@chr1:236140858..236140883, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:236140858..236140883, - |
Coexpression cluster: | C932_Mesenchymal_Adipocyte_Endothelial_Fibroblast_Renal_Pericytes_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.38e-19 | 15 |
subcutaneous fat cell | 3.24e-15 | 3 |
adipocyte of omentum tissue | 5.23e-15 | 3 |
adipocyte of breast | 1.12e-10 | 2 |
hepatic stem cell | 1.49e-10 | 2 |
hepatic mesenchymal stem cell | 1.49e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.24e-15 | 3 |
omentum | 1.09e-12 | 6 |
peritoneum | 1.09e-12 | 6 |
abdominal cavity | 1.09e-12 | 6 |
visceral peritoneum | 1.09e-12 | 6 |
hypodermis | 2.58e-09 | 5 |
breast | 6.99e-08 | 10 |
chest | 3.62e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.