FFCP PHASE1:Hg19::chr1:234743854..234743870,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=359948|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21729|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc009xfw.2_5end|coexpression_cluster_id=C3952|description=CAGE_peak_11_at_IRF2BP2_5end|id=chr1:234743854..234743870,-|ontology_enrichment_celltype=CL:0000766!4.20e-19!76;CL:0000763!1.69e-17!112;CL:0000049!1.69e-17!112;CL:0002057!1.09e-16!42;CL:0000738!7.93e-16!140;CL:0000988!2.18e-15!182;CL:0000037!4.49e-15!172;CL:0000566!4.49e-15!172;CL:0000839!4.88e-15!70;CL:0000557!6.33e-15!71;CL:0000860!3.19e-14!45;CL:0002032!7.46e-14!165;CL:0000837!7.46e-14!165;CL:0002009!8.54e-13!65;CL:0002194!9.19e-12!63;CL:0000576!9.19e-12!63;CL:0000040!9.19e-12!63;CL:0000559!9.19e-12!63;CL:0002031!1.37e-11!124;CL:0002371!3.61e-09!591;CL:0002087!5.73e-09!119;CL:0002320!1.57e-08!365;CL:0000134!1.23e-07!358;CL:0000144!1.27e-07!625;CL:0000094!3.61e-07!8|ontology_enrichment_celltype_v019=CL:0000860;9.92e-20;33!CL:0002057;9.92e-20;33!CL:0000766;3.81e-17;69!CL:0000094;9.64e-17;8!CL:0000081;6.25e-15;11!CL:0000473;6.40e-15;39!CL:0000234;6.40e-15;39!CL:0000576;3.96e-13;48!CL:0002393;1.14e-08;6!CL:0002397;1.14e-08;6!CL:0000097;8.94e-08;5!CL:0000738;1.16e-07;136!CL:0002087;1.32e-07;104!CL:0000767;1.47e-07;3!CL:0000763;1.82e-07;100!CL:0000775;5.07e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,6.26e-36,136;CL:0000766,2.46e-35,72;CL:0000988,7.09e-30,177;CL:0000037,3.78e-28,168;CL:0000860,3.56e-26,42;CL:0002057,3.56e-26,42;CL:0000557,5.29e-26,67;CL:0002032,3.63e-25,161;CL:0000837,3.63e-25,161;CL:0000763,8.97e-25,108;CL:0000049,8.97e-25,108;CL:0000473,7.07e-24,48;CL:0000234,7.07e-24,48;CL:0002031,1.26e-23,120;CL:0000839,6.36e-23,66;CL:0002009,1.68e-21,61;CL:0002087,2.70e-19,115;CL:0002194,4.78e-19,59;CL:0000576,4.78e-19,59;CL:0000040,4.78e-19,59;CL:0000559,4.78e-19,59;CL:0000094,6.33e-17,8;CL:0000081,4.55e-15,11;CL:0000134,1.70e-10,354;CL:0002320,5.93e-10,361;CL:0000034,4.60e-09,441;CL:0000048,5.98e-09,427;CL:0000723,1.44e-08,433;CL:0000219,4.47e-08,386;CL:0000097,8.71e-08,5;CL:0002028,8.71e-08,5;CL:0000767,1.42e-07,3;CL:0000775,4.07e-07,3;CL:0000784,7.15e-07,3|ontology_enrichment_development_v019=CL:0002057;1.47e-21;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.52e-13!80;UBERON:0002193!1.25e-12!112;UBERON:0002390!2.08e-12!102;UBERON:0003061!2.08e-12!102;UBERON:0002405!3.44e-12!115;UBERON:0001474!2.06e-11!86;UBERON:0004765!1.35e-10!101;UBERON:0001434!1.35e-10!101;UBERON:0002384!7.08e-08!375;UBERON:0003081!4.48e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.23e-22,108;UBERON:0002390,3.49e-22,98;UBERON:0003061,3.49e-22,98;UBERON:0002371,9.90e-22,76;UBERON:0002405,1.16e-20,93;UBERON:0001474,2.06e-19,82;UBERON:0004765,5.90e-18,90;UBERON:0001434,3.63e-15,100;UBERON:0003081,1.24e-11,203;UBERON:0002384,3.34e-10,371;UBERON:0002204,2.89e-08,167|phase1_expression=0.726713517082227,0,0.281908808191942,0,0,0.872338524100369,2.53299878168311,0,0,0.491467873003018,0,0.218441372130172,0,0.37129905888014,0.994192127183747,1.34465029290355,0.602694528023977,0,0,0.246242116153576,0.408001382488506,0,0,0.136874425072884,0,1.37544130346312,1.23150884174919,1.41679406364623,3.54027849164014,4.22212337906934,4.18003532953405,0,0.6024118375565,0,0,0,0,7.20194031091441,7.01905566145496,3.25516306073778,0,0.32389366601898,0.257575567634187,0.726991193897824,2.26725566213286,0.727752183563449,1.39457422143411,3.28934310417461,3.40677007984614,1.7261543539329,1.2808035326455,1.6553756092201,3.44745680736619,7.74581620300591,2.70852973188684,1.69418105588344,0.545812300115692,1.34834090667051,0.612167784741805,2.24650318953266,1.27867425159808,0,0.797854630486527,0.426224750532694,2.61188314765726,1.70215567407342,0.622822248995575,0.502497330513487,3.12889751052121,3.69221035998698,1.81619850790011,4.78760926783834,2.21523671208619,1.47878700418359,0.850417199860174,1.88692780957538,0.44931452458598,0.300353785683013,0.803627933485401,0,0,0,0,0,0,0,0,0,0,0,2.84606484554724,0.587237189370939,2.29363936875137,1.32171328579026,1.68152568894461,0.263384084775077,0.786839080455332,2.35806457649499,0.822405995998037,0,0,0,0,0.222820913770347,0.589211814949674,0.221533894583621,0,0,0,0,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,1.14966148080576,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.80642697289893,1.33720097891754,1.01377082717959,2.43806866313962,0,0.255725123687061,0.361439152384566,0.50133791063589,0.724232594804119,0.795285947051099,0,0.567208902984407,0.221729397462564,0.351339142772504,0.523916301990851,0.364295288292542,0,0.649094787309367,0.348259474598534,0.26591592103773,2.14641561874808,1.71598473234038,2.97166001063652,0,0,0.347140501607594,0.56530794192401,0.838998872419812,0,0.208994966536811,1.29208379584664,1.42306505074684,0.66944122552934,0,0.760272105718513,0.24406205754817,0.73532616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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=359948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21729 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc009xfw.2_5end | |||
|coexpression_cluster_id=C3952 | |||
|description=CAGE_peak_11_at_IRF2BP2_5end | |||
|id=chr1:234743854..234743870,- | |||
|ontology_enrichment_celltype=CL:0000766!4.20e-19!76;CL:0000763!1.69e-17!112;CL:0000049!1.69e-17!112;CL:0002057!1.09e-16!42;CL:0000738!7.93e-16!140;CL:0000988!2.18e-15!182;CL:0000037!4.49e-15!172;CL:0000566!4.49e-15!172;CL:0000839!4.88e-15!70;CL:0000557!6.33e-15!71;CL:0000860!3.19e-14!45;CL:0002032!7.46e-14!165;CL:0000837!7.46e-14!165;CL:0002009!8.54e-13!65;CL:0002194!9.19e-12!63;CL:0000576!9.19e-12!63;CL:0000040!9.19e-12!63;CL:0000559!9.19e-12!63;CL:0002031!1.37e-11!124;CL:0002371!3.61e-09!591;CL:0002087!5.73e-09!119;CL:0002320!1.57e-08!365;CL:0000134!1.23e-07!358;CL:0000144!1.27e-07!625;CL:0000094!3.61e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.92e-20;33!CL:0002057;9.92e-20;33!CL:0000766;3.81e-17;69!CL:0000094;9.64e-17;8!CL:0000081;6.25e-15;11!CL:0000473;6.40e-15;39!CL:0000234;6.40e-15;39!CL:0000576;3.96e-13;48!CL:0002393;1.14e-08;6!CL:0002397;1.14e-08;6!CL:0000097;8.94e-08;5!CL:0000738;1.16e-07;136!CL:0002087;1.32e-07;104!CL:0000767;1.47e-07;3!CL:0000763;1.82e-07;100!CL:0000775;5.07e-07;3 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.47e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.52e-13!80;UBERON:0002193!1.25e-12!112;UBERON:0002390!2.08e-12!102;UBERON:0003061!2.08e-12!102;UBERON:0002405!3.44e-12!115;UBERON:0001474!2.06e-11!86;UBERON:0004765!1.35e-10!101;UBERON:0001434!1.35e-10!101;UBERON:0002384!7.08e-08!375;UBERON:0003081!4.48e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p11@IRF2BP2 | |||
}} |
Revision as of 04:17, 12 September 2013
Short description: | p11@IRF2BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_IRF2BP2_5end |
Coexpression cluster: | C3952_CD14_Eosinophils_cord_Mast_Basophils_Dendritic_Neutrophils |
Association with transcript: | 0bp_to_uc009xfw.2_5end |
EntrezGene: | IRF2BP2 |
HGNC: | 21729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.23e-22 | 108 |
hematopoietic system | 3.49e-22 | 98 |
blood island | 3.49e-22 | 98 |
bone marrow | 9.90e-22 | 76 |
immune system | 1.16e-20 | 93 |
bone element | 2.06e-19 | 82 |
skeletal element | 5.90e-18 | 90 |
skeletal system | 3.63e-15 | 100 |
lateral plate mesoderm | 1.24e-11 | 203 |
connective tissue | 3.34e-10 | 371 |
musculoskeletal system | 2.89e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.