FFCP PHASE1:Hg19::chr1:218518942..218518953,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7042|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=11768|TSSclassifier=W|UniProt=P61812|association_with_transcript=266bp_to_NM_001135599,NM_003238_5end|coexpression_cluster_id=C2566|description=CAGE_peak_28_at_TGFB2_5end|id=chr1:218518942..218518953,+|ontology_enrichment_celltype=CL:0002548!9.04e-07!6|ontology_enrichment_celltype_v019=CL:0002548;1.57e-23;6!CL:0000222;6.47e-17;1!CL:0002494;3.17e-09;16!CL:1000415;3.43e-09;2|ontology_enrichment_celltype_v019_2=CL:0002548,1.57e-23,6;CL:0002494,3.17e-09,16;CL:1000415,3.43e-09,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4929;6.42e-09;2|ontology_enrichment_disease_v019_2=DOID:4929,8.74e-09,2|ontology_enrichment_uberon=UBERON:0002200!3.01e-08!11;UBERON:0006876!3.01e-08!11;UBERON:0000481!1.46e-07!347;UBERON:0000033!2.26e-07!123|ontology_enrichment_uberon_v019=UBERON:0007195;1.65e-16;1!UBERON:0004913;1.65e-16;1!UBERON:0003703;1.65e-16;1!UBERON:0001174;1.65e-16;1!UBERON:0004914;1.65e-16;1!UBERON:0002294;8.72e-10;7!UBERON:0001173;8.72e-10;7!UBERON:0006562;6.42e-09;2!UBERON:0000948;7.47e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.63e-16,1;UBERON:0004913,3.07e-16,1;UBERON:0003703,3.07e-16,1;UBERON:0001174,3.07e-16,1;UBERON:0004914,3.07e-16,1;UBERON:0002294,9.52e-08,9;UBERON:0001173,9.52e-08,9;UBERON:0004912,9.52e-08,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,1.12135520028461,2.1349799145941,1.2333377420858,0,0.134710672069688,0.163461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,2.34817388471643,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.958499421966331,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0,0,0,0,0,0.368738337083406,0,0.391602314925481,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,1.54016790088044,0,0,0.18532421910392,0.286249773483982,0.744316738719335,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0,0,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0.664653872707185,0,0,1.19472429772959,0,0,0,0,0,0,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0.126621591911757,0,4.48889393408589,0,0.19980960958213,0,1.14536596165916,0.343189995723929,0,0,0,0,0.104602846312333,0.611989305817931,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.201550417460179,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0,0,0.18628920882415,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,2.52369796457302,0,0,0,0.453411851024545,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0.353909170043221,0,0,0.762764190934334,0,0.198916222116275,0.0752103283492573,0.60511520611056,0,0,0.163771917510097,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7042 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11768 | |||
|TSSclassifier=W | |||
|UniProt=P61812 | |||
|association_with_transcript=266bp_to_NM_001135599,NM_003238_5end | |||
|coexpression_cluster_id=C2566 | |||
|description=CAGE_peak_28_at_TGFB2_5end | |||
|id=chr1:218518942..218518953,+ | |||
|ontology_enrichment_celltype=CL:0002548!9.04e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002548;1.57e-23;6!CL:0000222;6.47e-17;1!CL:0002494;3.17e-09;16!CL:1000415;3.43e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,1.57e-23,6;CL:0002494,3.17e-09,16;CL:1000415,3.43e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,8.74e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002200!3.01e-08!11;UBERON:0006876!3.01e-08!11;UBERON:0000481!1.46e-07!347;UBERON:0000033!2.26e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.65e-16;1!UBERON:0004913;1.65e-16;1!UBERON:0003703;1.65e-16;1!UBERON:0001174;1.65e-16;1!UBERON:0004914;1.65e-16;1!UBERON:0002294;8.72e-10;7!UBERON:0001173;8.72e-10;7!UBERON:0006562;6.42e-09;2!UBERON:0000948;7.47e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.63e-16,1;UBERON:0004913,3.07e-16,1;UBERON:0003703,3.07e-16,1;UBERON:0001174,3.07e-16,1;UBERON:0004914,3.07e-16,1;UBERON:0002294,9.52e-08,9;UBERON:0001173,9.52e-08,9;UBERON:0004912,9.52e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,1.12135520028461,2.1349799145941,1.2333377420858,0,0.134710672069688,0.163461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,2.34817388471643,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.958499421966331,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0,0,0,0,0,0.368738337083406,0,0.391602314925481,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,1.54016790088044,0,0,0.18532421910392,0.286249773483982,0.744316738719335,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0,0,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0.664653872707185,0,0,1.19472429772959,0,0,0,0,0,0,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0.126621591911757,0,4.48889393408589,0,0.19980960958213,0,1.14536596165916,0.343189995723929,0,0,0,0,0.104602846312333,0.611989305817931,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.201550417460179,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0,0,0.18628920882415,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,2.52369796457302,0,0,0,0.453411851024545,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0.353909170043221,0,0,0.762764190934334,0,0.198916222116275,0.0752103283492573,0.60511520611056,0,0,0.163771917510097,1.03499260351932,0,0,0.206686796501184,0,0,0,0,0,1.14986184875636,0,0,0.606965604236632,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0.22589216407792,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p28@TGFB2 | |||
}} |
Revision as of 03:40, 12 September 2013
Short description: | p28@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_TGFB2_5end |
Coexpression cluster: | C2566_Lens_gall_papillotubular_anaplastic_Ciliary_osteoclastoma_alveolar |
Association with transcript: | 266bp_to_NM_001135599, NM_003238_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | P61812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 1.57e-23 | 6 |
cardiocyte | 3.17e-09 | 16 |
epithelial cell of gall bladder | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.63e-16 | 1 |
hepatopancreatic ampulla | 3.07e-16 | 1 |
extrahepatic bile duct | 3.07e-16 | 1 |
common bile duct | 3.07e-16 | 1 |
duodenal papilla | 3.07e-16 | 1 |
biliary system | 9.52e-08 | 9 |
biliary tree | 9.52e-08 | 9 |
biliary bud | 9.52e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 8.74e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.