FFCP PHASE1:Hg19::chr1:207105188..207105210,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5284|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8968|TSSclassifier=S|UniProt=|association_with_transcript=-10bp_to_ENST00000487208_5end|coexpression_cluster_id=C189|description=CAGE_peak_3_at_PIGR_5end|id=chr1:207105188..207105210,-|ontology_enrichment_celltype=CL:0000945!1.16e-38!24;CL:0000826!1.16e-38!24;CL:0000542!2.26e-20!53;CL:0000051!2.26e-20!53;CL:0000838!4.32e-17!52;CL:0002087!1.89e-11!119;CL:0000236!2.72e-11!14;CL:0000946!6.77e-11!1;CL:0000786!6.77e-11!1;CL:0000980!6.77e-11!1;CL:0000738!1.98e-09!140;CL:0002031!1.28e-07!124;CL:0000037!2.73e-07!172;CL:0000566!2.73e-07!172;CL:0000988!8.93e-07!182|ontology_enrichment_celltype_v019=CL:0000945;2.00e-19;24!CL:0000542;1.91e-08;53!CL:0002087;7.98e-07;104|ontology_enrichment_celltype_v019_2=CL:0000945,2.00e-19,24;CL:0000826,2.00e-19,24;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0000838,1.78e-09,52;CL:0002087,1.17e-07,115|ontology_enrichment_development_v019=CL:0000051;1.91e-08;53|ontology_enrichment_disease=DOID:630!2.79e-11!1;DOID:0050177!2.79e-11!1;DOID:0050427!2.79e-11!1;DOID:12603!3.08e-11!1|ontology_enrichment_disease_v019=DOID:630;2.42e-50;1!DOID:0050177;2.42e-50;1!DOID:0050427;2.42e-50;1!DOID:12603;3.99e-50;1|ontology_enrichment_disease_v019_2=DOID:630,2.42e-50,1;DOID:0050177,2.42e-50,1;DOID:0050427,2.42e-50,1;DOID:12603,3.99e-50,1|ontology_enrichment_uberon=UBERON:0002106!1.93e-13!3;UBERON:0004854!1.93e-13!3;UBERON:0009034!1.93e-13!3;UBERON:0002095!1.93e-13!3;UBERON:0004782!1.93e-13!3;UBERON:0003281!1.93e-13!3;UBERON:0009664!1.93e-13!3;UBERON:0002296!1.93e-13!3;UBERON:0005602!1.93e-13!3;UBERON:0001179!1.93e-13!3;UBERON:0006293!1.93e-13!3;UBERON:0002372!1.61e-10!1;UBERON:0001961!1.61e-10!1;UBERON:0001744!1.61e-10!1;UBERON:0001735!1.61e-10!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04383492638291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,92.3136040958021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,68.2810888605886|short_description=p3@PIGR}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8968 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENST00000487208_5end | |||
|coexpression_cluster_id=C189 | |||
|description=CAGE_peak_3_at_PIGR_5end | |||
|id=chr1:207105188..207105210,- | |||
|ontology_enrichment_celltype=CL:0000945!1.16e-38!24;CL:0000826!1.16e-38!24;CL:0000542!2.26e-20!53;CL:0000051!2.26e-20!53;CL:0000838!4.32e-17!52;CL:0002087!1.89e-11!119;CL:0000236!2.72e-11!14;CL:0000946!6.77e-11!1;CL:0000786!6.77e-11!1;CL:0000980!6.77e-11!1;CL:0000738!1.98e-09!140;CL:0002031!1.28e-07!124;CL:0000037!2.73e-07!172;CL:0000566!2.73e-07!172;CL:0000988!8.93e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.00e-19;24!CL:0000542;1.91e-08;53!CL:0002087;7.98e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.00e-19,24;CL:0000826,2.00e-19,24;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0000838,1.78e-09,52;CL:0002087,1.17e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.91e-08;53 | |||
|ontology_enrichment_disease=DOID:630!2.79e-11!1;DOID:0050177!2.79e-11!1;DOID:0050427!2.79e-11!1;DOID:12603!3.08e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:630;2.42e-50;1!DOID:0050177;2.42e-50;1!DOID:0050427;2.42e-50;1!DOID:12603;3.99e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.42e-50,1;DOID:0050177,2.42e-50,1;DOID:0050427,2.42e-50,1;DOID:12603,3.99e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.93e-13!3;UBERON:0004854!1.93e-13!3;UBERON:0009034!1.93e-13!3;UBERON:0002095!1.93e-13!3;UBERON:0004782!1.93e-13!3;UBERON:0003281!1.93e-13!3;UBERON:0009664!1.93e-13!3;UBERON:0002296!1.93e-13!3;UBERON:0005602!1.93e-13!3;UBERON:0001179!1.93e-13!3;UBERON:0006293!1.93e-13!3;UBERON:0002372!1.61e-10!1;UBERON:0001961!1.61e-10!1;UBERON:0001744!1.61e-10!1;UBERON:0001735!1.61e-10!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04383492638291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,92.3136040958021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,68.2810888605886 | |||
|short_description=p3@PIGR | |||
}} |
Revision as of 03:12, 12 September 2013
Short description: | p3@PIGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PIGR_5end |
Coexpression cluster: | C189_b_splenic_tonsil_CD19_lymph_appendix_spleen |
Association with transcript: | -10bp_to_ENST00000487208_5end |
EntrezGene: | PIGR |
HGNC: | 8968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.00e-19 | 24 |
pro-B cell | 2.00e-19 | 24 |
lymphocyte | 9.01e-16 | 53 |
common lymphoid progenitor | 9.01e-16 | 53 |
lymphoid lineage restricted progenitor cell | 1.78e-09 | 52 |
nongranular leukocyte | 1.17e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.42e-50 | 1 |
monogenic disease | 2.42e-50 | 1 |
xeroderma pigmentosum | 2.42e-50 | 1 |
acute leukemia | 3.99e-50 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.