FFCP PHASE1:Hg19::chr1:207064145..207064159,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:207064145..207064159,-|id=chr1:207064145..207064159,-|ontology_enrichment_celltype=CL:0000860!9.30e-26!45;CL:0002057!3.02e-24!42;CL:0002194!1.96e-15!63;CL:0000576!1.96e-15!63;CL:0000040!1.96e-15!63;CL:0000559!1.96e-15!63;CL:0002009!1.31e-14!65;CL:0000839!1.85e-14!70;CL:0000557!4.33e-14!71;CL:0000766!2.50e-13!76|ontology_enrichment_celltype_v019=CL:0000860;4.41e-37;33!CL:0002057;4.41e-37;33!CL:0000473;8.92e-25;39!CL:0000234;8.92e-25;39!CL:0000576;1.38e-18;48!CL:0002567;6.96e-11;3!CL:0000766;6.09e-09;69!CL:0002195;3.14e-08;2!CL:0002571;3.14e-08;2|ontology_enrichment_celltype_v019_2=CL:0000860,4.42e-34,42;CL:0002057,4.42e-34,42;CL:0000473,4.42e-29,48;CL:0000234,4.42e-29,48;CL:0002194,4.28e-22,59;CL:0000576,4.28e-22,59;CL:0000040,4.28e-22,59;CL:0000559,4.28e-22,59;CL:0002009,3.39e-21,61;CL:0000839,3.48e-19,66;CL:0000557,8.09e-19,67;CL:0000766,3.86e-17,72;CL:0002567,6.97e-11,3;CL:0000763,1.12e-09,108;CL:0000049,1.12e-09,108;CL:0002087,8.83e-09,115;CL:0002031,3.31e-08,120;CL:0002195,3.44e-08,2;CL:0002571,3.44e-08,2|ontology_enrichment_development_v019=CL:0002057;1.74e-23;42|ontology_enrichment_disease=DOID:2394!6.95e-12!14|ontology_enrichment_disease_v019=DOID:2394;5.26e-11;14!DOID:1749;1.19e-10;14!DOID:120;8.36e-07;27|ontology_enrichment_disease_v019_2=DOID:2394,5.79e-11,14;DOID:1749,1.21e-10,14;DOID:120,8.85e-07,27|ontology_enrichment_uberon=UBERON:0002371!5.66e-14!80;UBERON:0001474!3.87e-12!86;UBERON:0002390!4.47e-12!102;UBERON:0003061!4.47e-12!102;UBERON:0002405!1.95e-11!115;UBERON:0004765!9.82e-11!101;UBERON:0001434!9.82e-11!101;UBERON:0002193!2.30e-10!112;UBERON:0000992!1.30e-08!13;UBERON:0002118!2.35e-07!5;UBERON:0004532!2.35e-07!5|ontology_enrichment_uberon_v019=UBERON:0002118;2.61e-11;5!UBERON:0002346;7.13e-08;4!UBERON:0000923;7.13e-08;4!UBERON:0010316;7.13e-08;4!UBERON:0005291;7.13e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-17,76;UBERON:0001474,5.57e-16,82;UBERON:0004765,1.68e-15,90;UBERON:0002405,1.98e-13,93;UBERON:0001434,2.28e-13,100;UBERON:0002390,1.84e-12,98;UBERON:0003061,1.84e-12,98;UBERON:0002118,2.62e-11,5;UBERON:0002193,8.41e-11,108;UBERON:0002204,3.38e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0.919421224478927,0,1.84877005083394,0,0,0,1.10799081706375,0.401088894940283,0,0,0,0,0,0,0.485168122375632,3.25400651667958,0.411167888021826,10.8397229813286,4.60307827715441,0.256160706529101,6.85798466676897,18.961012440514,10.973239620925,29.7938270507552,2.44715041405386,1.09162460023138,4.04502272001152,5.81559395504715,3.53021929783703,8.31138263538754,0.659702600373432,0.398927315243264,1.27867425159808,0.870627715885752,0.56738522469114,2.4912889959823,6.28121663141858,2.08593167368081,9.99068685643537,1.81619850790011,1.84138817993782,2.21523671208619,0,0.425208599930087,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0.717558542755448,0,0,0.900273288253207,0,5.66809188100384,0.18611685633159,0.675105328965065,0,0.757301322732344,0,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502644862058154,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.503946384596579,0.567100388969546,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.444485260045183,2.29193055334967,3.51652341630141,3.4214489204541,1.85089486865982,0,0,0,0,0,0,0,2.535908257668,0,0,0,0,0,6.14805372730035,0,0,0.325736184293735,4.26470338491055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.164254312027618,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,6.12541019974004,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,1.41904425628239,0,0,0,0,0.288666338176536,0,1.08890984861323,0.376575203107117,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0.556543525114529,0,0,0,0,0,0.102268682502155,0,0.622079175323615,2.15684042753584,0,0,0,0,3.3341097043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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:207064145..207064159,- | |||
|id=chr1:207064145..207064159,- | |||
|ontology_enrichment_celltype=CL:0000860!9.30e-26!45;CL:0002057!3.02e-24!42;CL:0002194!1.96e-15!63;CL:0000576!1.96e-15!63;CL:0000040!1.96e-15!63;CL:0000559!1.96e-15!63;CL:0002009!1.31e-14!65;CL:0000839!1.85e-14!70;CL:0000557!4.33e-14!71;CL:0000766!2.50e-13!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.41e-37;33!CL:0002057;4.41e-37;33!CL:0000473;8.92e-25;39!CL:0000234;8.92e-25;39!CL:0000576;1.38e-18;48!CL:0002567;6.96e-11;3!CL:0000766;6.09e-09;69!CL:0002195;3.14e-08;2!CL:0002571;3.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.42e-34,42;CL:0002057,4.42e-34,42;CL:0000473,4.42e-29,48;CL:0000234,4.42e-29,48;CL:0002194,4.28e-22,59;CL:0000576,4.28e-22,59;CL:0000040,4.28e-22,59;CL:0000559,4.28e-22,59;CL:0002009,3.39e-21,61;CL:0000839,3.48e-19,66;CL:0000557,8.09e-19,67;CL:0000766,3.86e-17,72;CL:0002567,6.97e-11,3;CL:0000763,1.12e-09,108;CL:0000049,1.12e-09,108;CL:0002087,8.83e-09,115;CL:0002031,3.31e-08,120;CL:0002195,3.44e-08,2;CL:0002571,3.44e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-23;42 | |||
|ontology_enrichment_disease=DOID:2394!6.95e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.26e-11;14!DOID:1749;1.19e-10;14!DOID:120;8.36e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.79e-11,14;DOID:1749,1.21e-10,14;DOID:120,8.85e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.66e-14!80;UBERON:0001474!3.87e-12!86;UBERON:0002390!4.47e-12!102;UBERON:0003061!4.47e-12!102;UBERON:0002405!1.95e-11!115;UBERON:0004765!9.82e-11!101;UBERON:0001434!9.82e-11!101;UBERON:0002193!2.30e-10!112;UBERON:0000992!1.30e-08!13;UBERON:0002118!2.35e-07!5;UBERON:0004532!2.35e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;2.61e-11;5!UBERON:0002346;7.13e-08;4!UBERON:0000923;7.13e-08;4!UBERON:0010316;7.13e-08;4!UBERON:0005291;7.13e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-17,76;UBERON:0001474,5.57e-16,82;UBERON:0004765,1.68e-15,90;UBERON:0002405,1.98e-13,93;UBERON:0001434,2.28e-13,100;UBERON:0002390,1.84e-12,98;UBERON:0003061,1.84e-12,98;UBERON:0002118,2.62e-11,5;UBERON:0002193,8.41e-11,108;UBERON:0002204,3.38e-07,167 | |||
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|short_description=p@chr1:207064145..207064159,- | |||
}} |
Revision as of 03:11, 12 September 2013
Short description: | p@chr1:207064145..207064159, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:207064145..207064159, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.42e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.42e-34 | 42 |
defensive cell | 4.42e-29 | 48 |
phagocyte | 4.42e-29 | 48 |
monopoietic cell | 4.28e-22 | 59 |
monocyte | 4.28e-22 | 59 |
monoblast | 4.28e-22 | 59 |
promonocyte | 4.28e-22 | 59 |
macrophage dendritic cell progenitor | 3.39e-21 | 61 |
myeloid lineage restricted progenitor cell | 3.48e-19 | 66 |
granulocyte monocyte progenitor cell | 8.09e-19 | 67 |
myeloid leukocyte | 3.86e-17 | 72 |
light melanocyte | 6.97e-11 | 3 |
myeloid cell | 1.12e-09 | 108 |
common myeloid progenitor | 1.12e-09 | 108 |
nongranular leukocyte | 8.83e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 3.31e-08 | 120 |
hepatic stem cell | 3.44e-08 | 2 |
hepatic mesenchymal stem cell | 3.44e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-17 | 76 |
bone element | 5.57e-16 | 82 |
skeletal element | 1.68e-15 | 90 |
immune system | 1.98e-13 | 93 |
skeletal system | 2.28e-13 | 100 |
hematopoietic system | 1.84e-12 | 98 |
blood island | 1.84e-12 | 98 |
right ovary | 2.62e-11 | 5 |
hemolymphoid system | 8.41e-11 | 108 |
musculoskeletal system | 3.38e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.79e-11 | 14 |
squamous cell carcinoma | 1.21e-10 | 14 |
female reproductive organ cancer | 8.85e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.