FFCP PHASE1:Hg19::chr1:206680884..206680896,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83593|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17609|TSSclassifier=S|UniProt=Q8WWW0,E9PDX5,Q59GG4|association_with_transcript=5bp_to_ENST00000338603,ENST00000355294,ENST00000367117,ENST00000367118,NM_182663,NM_182664,uc001hec.1,uc001hed.2,uc001hee.2_5end|coexpression_cluster_id=C7|description=CAGE_peak_7_at_RASSF5_5end|id=chr1:206680884..206680896,+|ontology_enrichment_celltype=CL:0000860!2.66e-22!45;CL:0002057!9.72e-21!42;CL:0000766!7.83e-16!76;CL:0000557!6.27e-15!71;CL:0002009!3.91e-14!65;CL:0000839!2.65e-13!70;CL:0002194!4.88e-13!63;CL:0000576!4.88e-13!63;CL:0000040!4.88e-13!63;CL:0000559!4.88e-13!63;CL:0000738!1.59e-08!140;CL:0000763!5.81e-08!112;CL:0000049!5.81e-08!112;CL:0002031!7.43e-07!124|ontology_enrichment_celltype_v019=CL:0000860;5.93e-31;33!CL:0002057;5.93e-31;33!CL:0000473;6.38e-21;39!CL:0000234;6.38e-21;39!CL:0000576;5.54e-17;48!CL:0000766;7.12e-11;69|ontology_enrichment_celltype_v019_2=CL:0000860,5.41e-32,42;CL:0002057,5.41e-32,42;CL:0000473,9.76e-27,48;CL:0000234,9.76e-27,48;CL:0002009,9.14e-22,61;CL:0000766,6.40e-21,72;CL:0000557,3.03e-20,67;CL:0002194,1.92e-19,59;CL:0000576,1.92e-19,59;CL:0000040,1.92e-19,59;CL:0000559,1.92e-19,59;CL:0000839,1.20e-17,66;CL:0000763,1.90e-13,108;CL:0000049,1.90e-13,108;CL:0000738,4.13e-11,136;CL:0002031,7.22e-10,120;CL:0002087,4.76e-09,115;CL:0002032,7.61e-08,161;CL:0000837,7.61e-08,161;CL:0000988,1.13e-07,177;CL:0000037,1.35e-07,168|ontology_enrichment_development_v019=CL:0002057;4.45e-24;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000062!4.55e-14!511;UBERON:0002371!1.93e-11!80;UBERON:0007023!1.53e-10!115;UBERON:0002390!4.76e-10!102;UBERON:0003061!4.76e-10!102;UBERON:0002619!8.95e-10!22;UBERON:0001474!1.03e-09!86;UBERON:0001950!2.41e-09!20;UBERON:0002193!3.75e-09!112;UBERON:0004765!4.36e-09!101;UBERON:0001434!4.36e-09!101;UBERON:0002405!7.79e-09!115;UBERON:0000467!1.04e-07!625;UBERON:0000480!1.46e-07!626;UBERON:0000956!1.68e-07!25;UBERON:0000203!1.68e-07!25;UBERON:0001869!3.73e-07!32;UBERON:0002020!4.60e-07!34;UBERON:0003528!4.60e-07!34;UBERON:0001893!5.40e-07!34|ontology_enrichment_uberon_v019=UBERON:0002619;3.37e-17;22!UBERON:0001950;4.70e-17;20!UBERON:0000956;1.18e-14;25!UBERON:0000203;1.18e-14;25!UBERON:0001869;2.81e-12;32!UBERON:0001893;2.74e-11;34!UBERON:0003528;7.70e-11;34!UBERON:0002020;7.70e-11;34!UBERON:0002791;1.15e-10;32!UBERON:0000200;5.49e-10;6!UBERON:0002780;8.12e-07;41!UBERON:0001890;8.12e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.23e-17,22;UBERON:0001950,2.11e-17,20;UBERON:0002371,1.11e-16,76;UBERON:0000956,4.95e-15,25;UBERON:0000203,4.95e-15,25;UBERON:0001474,9.33e-15,82;UBERON:0001869,8.45e-14,32;UBERON:0004765,1.32e-13,90;UBERON:0002390,2.47e-13,98;UBERON:0003061,2.47e-13,98;UBERON:0002405,7.86e-13,93;UBERON:0001893,1.05e-12,34;UBERON:0003528,1.58e-12,34;UBERON:0002020,1.58e-12,34;UBERON:0002791,3.80e-12,32;UBERON:0001434,3.85e-12,100;UBERON:0002193,5.08e-12,108;UBERON:0000200,2.21e-10,6;UBERON:0002780,9.97e-10,41;UBERON:0001890,9.97e-10,41;UBERON:0003080,9.97e-10,41;UBERON:0006240,9.97e-10,41;UBERON:0000073,4.18e-09,53;UBERON:0002616,4.18e-09,53;UBERON:0001049,2.48e-08,56;UBERON:0005068,2.48e-08,56;UBERON:0006241,2.48e-08,56;UBERON:0007135,2.48e-08,56;UBERON:0007023,5.59e-08,114;UBERON:0003081,8.18e-07,203|phase1_expression=0,0.214100523890983,0.845726424575827,1.0007329835313,0.893922188854576,0,0,0,0.522371256399677,0.491467873003018,0,0.655324116390517,0.527533956456907,0.495065411840187,1.65698687863958,2.01697543935533,0.602694528023977,0.730310090387373,0.975865597581014,0.123121058076788,0.612002073732759,0,0,0,0,1.29902789771517,1.9704141467987,1.02324015707783,0.393364276848904,0,0.928896739896456,0,0,0,0,0,0,2.21598163412751,6.21687787157439,3.90619567288533,0,0,0,0.726991193897824,0.755751887377619,0.242584061187816,6.74044207026485,3.70051099219643,2.47765096716083,10.6446185159196,9.22178543504762,8.98632473576624,1.37898272294647,2.5819387343353,5.41705946377367,2.63539275359647,2.18324920046277,0.674170453335254,3.67300670845083,3.53021929783703,3.83602275479425,12.2044981069085,10.9705011691898,8.09827026012119,4.64334781805734,5.6738522469114,3.73693349397345,6.53246529667532,5.21482918420201,3.69221035998698,4.23779651843358,3.68277635987565,2.21523671208619,0.422510572623884,0.637812899895131,0.838634582033504,0.898629049171961,0.750884464207532,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.534880391567015,0.289648807765598,7.31420598941885,0,0,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.785874452986276,0.364295288292542,1.11235332835329,0.324547393654683,0.348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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83593 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17609 | |||
|TSSclassifier=S | |||
|UniProt=Q8WWW0,E9PDX5,Q59GG4 | |||
|association_with_transcript=5bp_to_ENST00000338603,ENST00000355294,ENST00000367117,ENST00000367118,NM_182663,NM_182664,uc001hec.1,uc001hed.2,uc001hee.2_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_7_at_RASSF5_5end | |||
|id=chr1:206680884..206680896,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.66e-22!45;CL:0002057!9.72e-21!42;CL:0000766!7.83e-16!76;CL:0000557!6.27e-15!71;CL:0002009!3.91e-14!65;CL:0000839!2.65e-13!70;CL:0002194!4.88e-13!63;CL:0000576!4.88e-13!63;CL:0000040!4.88e-13!63;CL:0000559!4.88e-13!63;CL:0000738!1.59e-08!140;CL:0000763!5.81e-08!112;CL:0000049!5.81e-08!112;CL:0002031!7.43e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.93e-31;33!CL:0002057;5.93e-31;33!CL:0000473;6.38e-21;39!CL:0000234;6.38e-21;39!CL:0000576;5.54e-17;48!CL:0000766;7.12e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.41e-32,42;CL:0002057,5.41e-32,42;CL:0000473,9.76e-27,48;CL:0000234,9.76e-27,48;CL:0002009,9.14e-22,61;CL:0000766,6.40e-21,72;CL:0000557,3.03e-20,67;CL:0002194,1.92e-19,59;CL:0000576,1.92e-19,59;CL:0000040,1.92e-19,59;CL:0000559,1.92e-19,59;CL:0000839,1.20e-17,66;CL:0000763,1.90e-13,108;CL:0000049,1.90e-13,108;CL:0000738,4.13e-11,136;CL:0002031,7.22e-10,120;CL:0002087,4.76e-09,115;CL:0002032,7.61e-08,161;CL:0000837,7.61e-08,161;CL:0000988,1.13e-07,177;CL:0000037,1.35e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;4.45e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!4.55e-14!511;UBERON:0002371!1.93e-11!80;UBERON:0007023!1.53e-10!115;UBERON:0002390!4.76e-10!102;UBERON:0003061!4.76e-10!102;UBERON:0002619!8.95e-10!22;UBERON:0001474!1.03e-09!86;UBERON:0001950!2.41e-09!20;UBERON:0002193!3.75e-09!112;UBERON:0004765!4.36e-09!101;UBERON:0001434!4.36e-09!101;UBERON:0002405!7.79e-09!115;UBERON:0000467!1.04e-07!625;UBERON:0000480!1.46e-07!626;UBERON:0000956!1.68e-07!25;UBERON:0000203!1.68e-07!25;UBERON:0001869!3.73e-07!32;UBERON:0002020!4.60e-07!34;UBERON:0003528!4.60e-07!34;UBERON:0001893!5.40e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.37e-17;22!UBERON:0001950;4.70e-17;20!UBERON:0000956;1.18e-14;25!UBERON:0000203;1.18e-14;25!UBERON:0001869;2.81e-12;32!UBERON:0001893;2.74e-11;34!UBERON:0003528;7.70e-11;34!UBERON:0002020;7.70e-11;34!UBERON:0002791;1.15e-10;32!UBERON:0000200;5.49e-10;6!UBERON:0002780;8.12e-07;41!UBERON:0001890;8.12e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.23e-17,22;UBERON:0001950,2.11e-17,20;UBERON:0002371,1.11e-16,76;UBERON:0000956,4.95e-15,25;UBERON:0000203,4.95e-15,25;UBERON:0001474,9.33e-15,82;UBERON:0001869,8.45e-14,32;UBERON:0004765,1.32e-13,90;UBERON:0002390,2.47e-13,98;UBERON:0003061,2.47e-13,98;UBERON:0002405,7.86e-13,93;UBERON:0001893,1.05e-12,34;UBERON:0003528,1.58e-12,34;UBERON:0002020,1.58e-12,34;UBERON:0002791,3.80e-12,32;UBERON:0001434,3.85e-12,100;UBERON:0002193,5.08e-12,108;UBERON:0000200,2.21e-10,6;UBERON:0002780,9.97e-10,41;UBERON:0001890,9.97e-10,41;UBERON:0003080,9.97e-10,41;UBERON:0006240,9.97e-10,41;UBERON:0000073,4.18e-09,53;UBERON:0002616,4.18e-09,53;UBERON:0001049,2.48e-08,56;UBERON:0005068,2.48e-08,56;UBERON:0006241,2.48e-08,56;UBERON:0007135,2.48e-08,56;UBERON:0007023,5.59e-08,114;UBERON:0003081,8.18e-07,203 | |||
|phase1_expression=0,0.214100523890983,0.845726424575827,1.0007329835313,0.893922188854576,0,0,0,0.522371256399677,0.491467873003018,0,0.655324116390517,0.527533956456907,0.495065411840187,1.65698687863958,2.01697543935533,0.602694528023977,0.730310090387373,0.975865597581014,0.123121058076788,0.612002073732759,0,0,0,0,1.29902789771517,1.9704141467987,1.02324015707783,0.393364276848904,0,0.928896739896456,0,0,0,0,0,0,2.21598163412751,6.21687787157439,3.90619567288533,0,0,0,0.726991193897824,0.755751887377619,0.242584061187816,6.74044207026485,3.70051099219643,2.47765096716083,10.6446185159196,9.22178543504762,8.98632473576624,1.37898272294647,2.5819387343353,5.41705946377367,2.63539275359647,2.18324920046277,0.674170453335254,3.67300670845083,3.53021929783703,3.83602275479425,12.2044981069085,10.9705011691898,8.09827026012119,4.64334781805734,5.6738522469114,3.73693349397345,6.53246529667532,5.21482918420201,3.69221035998698,4.23779651843358,3.68277635987565,2.21523671208619,0.422510572623884,0.637812899895131,0.838634582033504,0.898629049171961,0.750884464207532,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.534880391567015,0.289648807765598,7.31420598941885,0,0,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.785874452986276,0.364295288292542,1.11235332835329,0.324547393654683,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0.436094052142534,0,0.25326102332916,0.529636723252875,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0,0.206651562351531,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0.300476117813194,0.113432183160021,0.717558542755448,1.06778694409284,0.423863802319124,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,0.675105328965065,0.194874010322397,0.504867548488229,0.644349290496095,0.323292113637624,0,0,0.169560592310488,0.386521706326594,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0.946454400318751,1.51726221070292,0.723033089650446,0.882351781859152,1.74303555273925,0.474541238222193,0.943819157121151,1.56977172100277,1.53898862778556,0,0,0,0,2.53510069643662,0.982827216677626,0,0,0,0,0.439001141634502,0,0.603173834469785,0.277765335475589,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0.93733833986777,0,0.141775097242386,0.806026704325635,0,1.15014803749563,0.985326475791887,1.14462964217194,0.829312462163088,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,1.74306691720059,0.299918973546171,0,0,0,0,0,0,0,0,0,0.112085143993527,0.788123040807709,1.07813787429759,0.898401253958239,0,1.30139853857622,0,0.335032530668698,0,2.24702107184155,2.99161459204025,0,0.36807447515742,0.500170521059677,0.271265023699736,0.415941723061614,0.356857977594324,0.315404830067869,0.585707074963566,0,0,1.03473071292505,0,0,0,0,0,0.82707210449155,1.07857100409308,0.853820462427555,0.909382714338778,1.66435439510497,0,0,0,0,0.640695746278505,0,0.64341568457443,0,0.154209693802656,0.710246901252508,0.739144404124282,0,0.348631135379878,0.362578348774867,0,0.920809889358963,0.34444334449382,0.364182336013434,0.524497659837696,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0.509752546090077,0,0,0,0,0,0,0.325378394664303,1.03041011647722,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0,0,0.307007349452259,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.127612712494584,0.2023155617111,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.117812402345686,0.606547444719948,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0,0,0,1.26664581178598,0.987884678879706,0,0,0.192444225451024,0,1.08890984861323,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.735120647943095,0.371606350251437,0,0,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0.481764225311099,0,0,0.343505344755765,0,0,0,0,2.78406173895242,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,2.14870036263921,0.593929361665277,3.07160702099232,0.994147647766298,0.703347082052564,0.445234820091624,0,0,1.19548792950642,0.276283915531148,0,0.102268682502155,0.615424027305347,0.311039587661807,0.629078458031288,0.358042349351218,0,1.38100767891707,0,0,0.969332746095218,1.669825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| |||
|short_description=p7@RASSF5 | |||
}} |
Revision as of 03:08, 12 September 2013
Short description: | p7@RASSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RASSF5_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 5bp_to_ENST00000338603, ENST00000355294, ENST00000367117, ENST00000367118, NM_182663, NM_182664, uc001hec.1, uc001hed.2, uc001hee.2_5end |
EntrezGene: | RASSF5 |
HGNC: | 17609 |
UniProt: | Q8WWW0E9PDX5Q59GG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.41e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.41e-32 | 42 |
defensive cell | 9.76e-27 | 48 |
phagocyte | 9.76e-27 | 48 |
macrophage dendritic cell progenitor | 9.14e-22 | 61 |
myeloid leukocyte | 6.40e-21 | 72 |
granulocyte monocyte progenitor cell | 3.03e-20 | 67 |
monopoietic cell | 1.92e-19 | 59 |
monocyte | 1.92e-19 | 59 |
monoblast | 1.92e-19 | 59 |
promonocyte | 1.92e-19 | 59 |
myeloid lineage restricted progenitor cell | 1.20e-17 | 66 |
myeloid cell | 1.90e-13 | 108 |
common myeloid progenitor | 1.90e-13 | 108 |
leukocyte | 4.13e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 7.22e-10 | 120 |
nongranular leukocyte | 4.76e-09 | 115 |
hematopoietic oligopotent progenitor cell | 7.61e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.61e-08 | 161 |
hematopoietic cell | 1.13e-07 | 177 |
hematopoietic stem cell | 1.35e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.23e-17 | 22 |
neocortex | 2.11e-17 | 20 |
bone marrow | 1.11e-16 | 76 |
cerebral cortex | 4.95e-15 | 25 |
pallium | 4.95e-15 | 25 |
bone element | 9.33e-15 | 82 |
cerebral hemisphere | 8.45e-14 | 32 |
skeletal element | 1.32e-13 | 90 |
hematopoietic system | 2.47e-13 | 98 |
blood island | 2.47e-13 | 98 |
immune system | 7.86e-13 | 93 |
telencephalon | 1.05e-12 | 34 |
brain grey matter | 1.58e-12 | 34 |
gray matter | 1.58e-12 | 34 |
regional part of telencephalon | 3.80e-12 | 32 |
skeletal system | 3.85e-12 | 100 |
hemolymphoid system | 5.08e-12 | 108 |
gyrus | 2.21e-10 | 6 |
regional part of forebrain | 9.97e-10 | 41 |
forebrain | 9.97e-10 | 41 |
anterior neural tube | 9.97e-10 | 41 |
future forebrain | 9.97e-10 | 41 |
regional part of nervous system | 4.18e-09 | 53 |
regional part of brain | 4.18e-09 | 53 |
neural tube | 2.48e-08 | 56 |
neural rod | 2.48e-08 | 56 |
future spinal cord | 2.48e-08 | 56 |
neural keel | 2.48e-08 | 56 |
adult organism | 5.59e-08 | 114 |
lateral plate mesoderm | 8.18e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.