FFCP PHASE1:Hg19::chr1:20354880..20354902,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5322|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9038|TSSclassifier=S|UniProt=|association_with_transcript=-20bp_to_ENST00000465698_5end|coexpression_cluster_id=C2469|description=CAGE_peak_3_at_PLA2G5_5end|id=chr1:20354880..20354902,+|ontology_enrichment_celltype=CL:0000746!2.06e-15!3;CL:0000513!2.06e-15!3;CL:0000737!1.10e-11!4;CL:0002494!1.59e-10!16;CL:0002195!3.98e-10!2;CL:0002571!3.98e-10!2;CL:0002548!6.19e-08!6|ontology_enrichment_celltype_v019=CL:0000746;3.11e-21;3!CL:0000737;4.44e-16;4!CL:0002494;6.36e-15;16!CL:0002548;8.20e-11;6!CL:0002557;5.62e-08;1|ontology_enrichment_celltype_v019_2=CL:0000746,3.33e-21,3;CL:0000513,3.33e-21,3;CL:0000737,4.68e-16,4;CL:0002494,5.76e-15,16;CL:0002548,6.92e-11,6;CL:0002557,6.68e-08,1|ontology_enrichment_development_v019=CL:0000513;3.11e-21;3!UBERON:0005062;6.20e-17;4!UBERON:0007284;6.20e-17;4!UBERON:0006603;1.28e-09;65!UBERON:0004872;1.65e-09;7!UBERON:0010226;1.22e-08;1!UBERON:0004140;1.31e-08;1!UBERON:0003124;2.50e-08;1!UBERON:0000358;3.44e-08;1!UBERON:0004874;5.62e-08;1!UBERON:0009117;5.70e-07;10!UBERON:0005564;5.70e-07;10|ontology_enrichment_disease=DOID:114!2.59e-11!2|ontology_enrichment_disease_v019=DOID:114;2.28e-15;2!DOID:178;2.09e-08;1!DOID:326;2.09e-08;1!DOID:3978;2.09e-08;1!DOID:3394;2.09e-08;1!DOID:5844;2.09e-08;1!DOID:1287;4.04e-08;4|ontology_enrichment_disease_v019_2=DOID:114,2.20e-15,2;DOID:178,2.02e-08,1;DOID:326,2.02e-08,1;DOID:3978,2.02e-08,1;DOID:3394,2.02e-08,1;DOID:5844,2.02e-08,1;DOID:1287,3.97e-08,4|ontology_enrichment_uberon=UBERON:0007100!1.63e-38!27;UBERON:0000948!1.60e-27!24;UBERON:0005498!1.60e-27!24;UBERON:0004140!1.60e-27!24;UBERON:0009881!1.60e-27!24;UBERON:0004141!1.60e-27!24;UBERON:0003084!1.60e-27!24;UBERON:0007005!1.60e-27!24;UBERON:0004139!1.60e-27!24;UBERON:0004291!1.60e-27!24;UBERON:0003103!4.54e-19!69;UBERON:0003978!3.13e-16!3;UBERON:0009751!3.13e-16!3;UBERON:0000946!3.13e-16!3;UBERON:0002523!3.13e-16!3;UBERON:0005983!3.13e-16!3;UBERON:0002165!3.13e-16!3;UBERON:0002062!3.13e-16!3;UBERON:0007280!3.13e-16!3;UBERON:0007023!7.62e-14!115;UBERON:0003914!6.74e-12!118;UBERON:0002133!1.48e-11!2;UBERON:0001048!4.05e-10!168;UBERON:0003127!5.53e-10!2;UBERON:0004872!7.04e-10!84;UBERON:0001009!7.84e-09!113;UBERON:0004151!6.31e-08!3;UBERON:0000025!6.73e-08!194;UBERON:0004145!1.39e-07!3;UBERON:0003135!2.06e-07!11;UBERON:0004111!7.89e-07!241|ontology_enrichment_uberon_v019=UBERON:0007100;2.28e-52;25!UBERON:0000948;1.51e-36;22!UBERON:0003978;2.21e-22;3!UBERON:0000946;2.21e-22;3!UBERON:0002133;9.97e-16;2!UBERON:0010313;1.46e-11;10!UBERON:0004151;1.01e-10;3!UBERON:0003135;2.61e-10;11!UBERON:0002135;9.79e-09;1!UBERON:0003103;1.03e-08;61!UBERON:0002134;1.05e-08;1!UBERON:0005208;1.05e-08;1!UBERON:0004145;1.05e-08;1!UBERON:0005946;1.05e-08;1!UBERON:0005965;1.05e-08;1!UBERON:0002078;1.05e-08;1!UBERON:0002084;1.22e-08;1!UBERON:0002082;1.22e-08;1!UBERON:0002146;2.09e-08;1!UBERON:0005623;2.09e-08;1!UBERON:0001301;3.44e-08;1!UBERON:0000989;5.62e-08;1!UBERON:0008811;5.62e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.19e-55,27;UBERON:0000948,1.38e-39,24;UBERON:0005498,1.38e-39,24;UBERON:0004140,1.38e-39,24;UBERON:0009881,1.38e-39,24;UBERON:0004141,1.38e-39,24;UBERON:0003084,1.38e-39,24;UBERON:0007005,1.38e-39,24;UBERON:0004139,1.38e-39,24;UBERON:0004291,1.38e-39,24;UBERON:0003103,3.57e-23,68;UBERON:0003978,2.30e-22,3;UBERON:0009751,2.30e-22,3;UBERON:0000946,2.30e-22,3;UBERON:0002523,2.30e-22,3;UBERON:0005983,2.30e-22,3;UBERON:0002165,2.30e-22,3;UBERON:0002062,2.30e-22,3;UBERON:0007280,2.30e-22,3;UBERON:0002133,9.98e-16,2;UBERON:0004872,1.12e-13,83;UBERON:0001009,8.42e-13,112;UBERON:0003914,5.48e-12,117;UBERON:0010313,1.59e-11,10;UBERON:0002342,1.59e-11,10;UBERON:0005062,1.59e-11,10;UBERON:0007023,6.34e-11,114;UBERON:0004151,1.01e-10,3;UBERON:0001048,1.45e-10,160;UBERON:0003135,2.43e-10,11;UBERON:0004145,3.12e-10,3;UBERON:0004797,6.90e-10,7;UBERON:0002135,9.79e-09,1;UBERON:0002134,1.05e-08,1;UBERON:0005208,1.05e-08,1;UBERON:0005946,1.05e-08,1;UBERON:0005965,1.05e-08,1;UBERON:0002078,1.05e-08,1;UBERON:0002084,1.22e-08,1;UBERON:0002082,1.22e-08,1;UBERON:0010226,1.22e-08,1;UBERON:0002146,2.17e-08,1;UBERON:0005623,2.17e-08,1;UBERON:0004535,2.63e-08,109;UBERON:0001301,3.83e-08,1;UBERON:0000989,4.41e-08,1;UBERON:0008811,4.41e-08,1;UBERON:0006258,4.41e-08,1;UBERON:0005876,4.41e-08,1;UBERON:0004874,4.41e-08,1;UBERON:0000025,5.27e-07,192|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,6.03630773733273,1.53435074212236,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11211035399766,2.96363478553314,1.63461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36118619792025,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9038 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_ENST00000465698_5end | |||
|coexpression_cluster_id=C2469 | |||
|description=CAGE_peak_3_at_PLA2G5_5end | |||
|id=chr1:20354880..20354902,+ | |||
|ontology_enrichment_celltype=CL:0000746!2.06e-15!3;CL:0000513!2.06e-15!3;CL:0000737!1.10e-11!4;CL:0002494!1.59e-10!16;CL:0002195!3.98e-10!2;CL:0002571!3.98e-10!2;CL:0002548!6.19e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000746;3.11e-21;3!CL:0000737;4.44e-16;4!CL:0002494;6.36e-15;16!CL:0002548;8.20e-11;6!CL:0002557;5.62e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,3.33e-21,3;CL:0000513,3.33e-21,3;CL:0000737,4.68e-16,4;CL:0002494,5.76e-15,16;CL:0002548,6.92e-11,6;CL:0002557,6.68e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000513;3.11e-21;3!UBERON:0005062;6.20e-17;4!UBERON:0007284;6.20e-17;4!UBERON:0006603;1.28e-09;65!UBERON:0004872;1.65e-09;7!UBERON:0010226;1.22e-08;1!UBERON:0004140;1.31e-08;1!UBERON:0003124;2.50e-08;1!UBERON:0000358;3.44e-08;1!UBERON:0004874;5.62e-08;1!UBERON:0009117;5.70e-07;10!UBERON:0005564;5.70e-07;10 | |||
|ontology_enrichment_disease=DOID:114!2.59e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.28e-15;2!DOID:178;2.09e-08;1!DOID:326;2.09e-08;1!DOID:3978;2.09e-08;1!DOID:3394;2.09e-08;1!DOID:5844;2.09e-08;1!DOID:1287;4.04e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.20e-15,2;DOID:178,2.02e-08,1;DOID:326,2.02e-08,1;DOID:3978,2.02e-08,1;DOID:3394,2.02e-08,1;DOID:5844,2.02e-08,1;DOID:1287,3.97e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.63e-38!27;UBERON:0000948!1.60e-27!24;UBERON:0005498!1.60e-27!24;UBERON:0004140!1.60e-27!24;UBERON:0009881!1.60e-27!24;UBERON:0004141!1.60e-27!24;UBERON:0003084!1.60e-27!24;UBERON:0007005!1.60e-27!24;UBERON:0004139!1.60e-27!24;UBERON:0004291!1.60e-27!24;UBERON:0003103!4.54e-19!69;UBERON:0003978!3.13e-16!3;UBERON:0009751!3.13e-16!3;UBERON:0000946!3.13e-16!3;UBERON:0002523!3.13e-16!3;UBERON:0005983!3.13e-16!3;UBERON:0002165!3.13e-16!3;UBERON:0002062!3.13e-16!3;UBERON:0007280!3.13e-16!3;UBERON:0007023!7.62e-14!115;UBERON:0003914!6.74e-12!118;UBERON:0002133!1.48e-11!2;UBERON:0001048!4.05e-10!168;UBERON:0003127!5.53e-10!2;UBERON:0004872!7.04e-10!84;UBERON:0001009!7.84e-09!113;UBERON:0004151!6.31e-08!3;UBERON:0000025!6.73e-08!194;UBERON:0004145!1.39e-07!3;UBERON:0003135!2.06e-07!11;UBERON:0004111!7.89e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.28e-52;25!UBERON:0000948;1.51e-36;22!UBERON:0003978;2.21e-22;3!UBERON:0000946;2.21e-22;3!UBERON:0002133;9.97e-16;2!UBERON:0010313;1.46e-11;10!UBERON:0004151;1.01e-10;3!UBERON:0003135;2.61e-10;11!UBERON:0002135;9.79e-09;1!UBERON:0003103;1.03e-08;61!UBERON:0002134;1.05e-08;1!UBERON:0005208;1.05e-08;1!UBERON:0004145;1.05e-08;1!UBERON:0005946;1.05e-08;1!UBERON:0005965;1.05e-08;1!UBERON:0002078;1.05e-08;1!UBERON:0002084;1.22e-08;1!UBERON:0002082;1.22e-08;1!UBERON:0002146;2.09e-08;1!UBERON:0005623;2.09e-08;1!UBERON:0001301;3.44e-08;1!UBERON:0000989;5.62e-08;1!UBERON:0008811;5.62e-08;1 | |||
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|short_description=p3@PLA2G5 | |||
}} |
Revision as of 02:56, 12 September 2013
Short description: | p3@PLA2G5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PLA2G5_5end |
Coexpression cluster: | C2469_heart_left_testis_Cardiac_ovary_pineal_placenta |
Association with transcript: | -20bp_to_ENST00000465698_5end |
EntrezGene: | PLA2G5 |
HGNC: | 9038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 3.33e-21 | 3 |
cardiac muscle myoblast | 3.33e-21 | 3 |
striated muscle cell | 4.68e-16 | 4 |
cardiocyte | 5.76e-15 | 16 |
cardiac fibroblast | 6.92e-11 | 6 |
fibroblast of pulmonary artery | 6.68e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.20e-15 | 2 |
vascular disease | 2.02e-08 | 1 |
ischemia | 2.02e-08 | 1 |
extrinsic cardiomyopathy | 2.02e-08 | 1 |
myocardial ischemia | 2.02e-08 | 1 |
myocardial infarction | 2.02e-08 | 1 |
cardiovascular system disease | 3.97e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.