FFCP PHASE1:Hg19::chr1:174844739..174844770,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9910|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24663|TSSclassifier=W|UniProt=|association_with_transcript=55bp_to_ENST00000486220,uc001gkg.2_5end|description=CAGE_peak_38_at_RABGAP1L_5end|id=chr1:174844739..174844770,+|ontology_enrichment_celltype=CL:0002537!8.45e-08!5|ontology_enrichment_celltype_v019=CL:0002178;7.78e-11;3!CL:0002537;4.79e-07;5|ontology_enrichment_celltype_v019_2=CL:0002178,7.42e-11,3;CL:0002537,4.79e-07,5|ontology_enrichment_development_v019=UBERON:0000358;2.05e-29;1|ontology_enrichment_disease=DOID:3493!5.95e-09!2;DOID:299!1.04e-08!25|ontology_enrichment_disease_v019=DOID:3493;1.91e-15;2!DOID:299;6.81e-11;25|ontology_enrichment_disease_v019_2=DOID:3493,2.05e-15,2;DOID:299,6.69e-11,25|ontology_enrichment_uberon=UBERON:0000945!1.56e-07!8;UBERON:0010039!1.56e-07!8|ontology_enrichment_uberon_v019=UBERON:0000945;5.23e-07;5!UBERON:0010039;5.23e-07;5|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1623345421307,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,1.38847790668105,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,3.74635084600676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.160753148465019,1.2378549293751,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.392600934460972,2.19452264968085,0,0,0,0,0.701818390386317,0,0,0.11294608203896,0,0,0.0771741581079447,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,2.34640942403454,0,0,0,0,0|short_description=p38@RABGAP1L}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=55bp_to_ENST00000486220,uc001gkg.2_5end | |||
|description=CAGE_peak_38_at_RABGAP1L_5end | |||
|id=chr1:174844739..174844770,+ | |||
|ontology_enrichment_celltype=CL:0002537!8.45e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002178;7.78e-11;3!CL:0002537;4.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,7.42e-11,3;CL:0002537,4.79e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.05e-29;1 | |||
|ontology_enrichment_disease=DOID:3493!5.95e-09!2;DOID:299!1.04e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.91e-15;2!DOID:299;6.81e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.05e-15,2;DOID:299,6.69e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0000945!1.56e-07!8;UBERON:0010039!1.56e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;5.23e-07;5!UBERON:0010039;5.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p38@RABGAP1L | |||
}} |
Revision as of 01:55, 12 September 2013
Short description: | p38@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_38_at_RABGAP1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000486220, uc001gkg.2_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 7.42e-11 | 3 |
amnion mesenchymal stem cell | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.05e-15 | 2 |
adenocarcinoma | 6.69e-11 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.