FFCP PHASE1:Hg19::chr1:163113043..163113054,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8490|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=10001|TSSclassifier=S|UniProt=|association_with_transcript=126bp_to_AL157502_5end|description=CAGE_peak_9_at_RGS5_5end|id=chr1:163113043..163113054,-|ontology_enrichment_celltype=CL:0002618!2.33e-07!3|ontology_enrichment_celltype_v019=CL:0000746;6.14e-07;3|ontology_enrichment_celltype_v019_2=CL:0000746,6.14e-07,3;CL:0000513,6.14e-07,3|ontology_enrichment_development_v019=UBERON:0006965;9.90e-34;2!UBERON:0004874;8.72e-18;1!UBERON:0004872;2.24e-10;7!CL:0000513;6.14e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.94e-52!115;UBERON:0002020!3.80e-19!34;UBERON:0003528!3.80e-19!34;UBERON:0002616!5.19e-17!59;UBERON:0003075!6.77e-17!86;UBERON:0007284!6.77e-17!86;UBERON:0001893!6.79e-17!34;UBERON:0001049!3.73e-16!57;UBERON:0005068!3.73e-16!57;UBERON:0006241!3.73e-16!57;UBERON:0007135!3.73e-16!57;UBERON:0001869!4.85e-16!32;UBERON:0002346!8.68e-16!90;UBERON:0002791!1.39e-15!33;UBERON:0002308!1.89e-15!9;UBERON:0000125!1.89e-15!9;UBERON:0002780!5.59e-15!41;UBERON:0001890!5.59e-15!41;UBERON:0006240!5.59e-15!41;UBERON:0003080!1.63e-14!42;UBERON:0000955!2.39e-13!69;UBERON:0006238!2.39e-13!69;UBERON:0005743!1.04e-12!86;UBERON:0001017!1.58e-12!82;UBERON:0002420!4.18e-12!9;UBERON:0007245!4.18e-12!9;UBERON:0010009!4.18e-12!9;UBERON:0010011!4.18e-12!9;UBERON:0000454!4.18e-12!9;UBERON:0000073!5.26e-12!94;UBERON:0001016!5.26e-12!94;UBERON:0009663!1.31e-11!7;UBERON:0003056!8.18e-11!61;UBERON:0000025!1.11e-10!194;UBERON:0001871!1.67e-10!7;UBERON:0002619!4.92e-10!22;UBERON:0004111!9.52e-10!241;UBERON:0000477!2.32e-09!286;UBERON:0001950!3.22e-09!20;UBERON:0000956!1.34e-08!25;UBERON:0000203!1.34e-08!25;UBERON:0003978!1.68e-08!3;UBERON:0009751!1.68e-08!3;UBERON:0000946!1.68e-08!3;UBERON:0002523!1.68e-08!3;UBERON:0005983!1.68e-08!3;UBERON:0002165!1.68e-08!3;UBERON:0002062!1.68e-08!3;UBERON:0007280!1.68e-08!3;UBERON:0000119!5.67e-08!312;UBERON:0000153!8.99e-08!129;UBERON:0007811!8.99e-08!129;UBERON:0000481!1.15e-07!347;UBERON:0000483!1.16e-07!309;UBERON:0000033!1.16e-07!123;UBERON:0006331!1.32e-07!3;UBERON:0002771!1.32e-07!3;UBERON:0000988!2.67e-07!3;UBERON:0002298!9.41e-07!8|ontology_enrichment_uberon_v019=UBERON:0002146;3.16e-18;1!UBERON:0005623;3.16e-18;1!UBERON:0000989;8.72e-18;1!UBERON:0008811;8.72e-18;1!UBERON:0003978;6.14e-07;3!UBERON:0000946;6.14e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.66e-18,1;UBERON:0005623,2.66e-18,1;UBERON:0000989,4.44e-18,1;UBERON:0008811,4.44e-18,1;UBERON:0006258,4.44e-18,1;UBERON:0005876,4.44e-18,1;UBERON:0004874,4.44e-18,1;UBERON:0003978,5.80e-07,3;UBERON:0009751,5.80e-07,3;UBERON:0000946,5.80e-07,3;UBERON:0002523,5.80e-07,3;UBERON:0005983,5.80e-07,3;UBERON:0002165,5.80e-07,3;UBERON:0002062,5.80e-07,3;UBERON:0007280,5.80e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79951384127703,0,0,0,0,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.562677665642051,0,0,1.05562704063997,1.79323189425963,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0.126621591911757,0,0,0.426905989478705,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,2.7499250881402,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0.213574825135389,0.31440861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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10001 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=126bp_to_AL157502_5end | |||
|description=CAGE_peak_9_at_RGS5_5end | |||
|id=chr1:163113043..163113054,- | |||
|ontology_enrichment_celltype=CL:0002618!2.33e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000746;6.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,6.14e-07,3;CL:0000513,6.14e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.90e-34;2!UBERON:0004874;8.72e-18;1!UBERON:0004872;2.24e-10;7!CL:0000513;6.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.94e-52!115;UBERON:0002020!3.80e-19!34;UBERON:0003528!3.80e-19!34;UBERON:0002616!5.19e-17!59;UBERON:0003075!6.77e-17!86;UBERON:0007284!6.77e-17!86;UBERON:0001893!6.79e-17!34;UBERON:0001049!3.73e-16!57;UBERON:0005068!3.73e-16!57;UBERON:0006241!3.73e-16!57;UBERON:0007135!3.73e-16!57;UBERON:0001869!4.85e-16!32;UBERON:0002346!8.68e-16!90;UBERON:0002791!1.39e-15!33;UBERON:0002308!1.89e-15!9;UBERON:0000125!1.89e-15!9;UBERON:0002780!5.59e-15!41;UBERON:0001890!5.59e-15!41;UBERON:0006240!5.59e-15!41;UBERON:0003080!1.63e-14!42;UBERON:0000955!2.39e-13!69;UBERON:0006238!2.39e-13!69;UBERON:0005743!1.04e-12!86;UBERON:0001017!1.58e-12!82;UBERON:0002420!4.18e-12!9;UBERON:0007245!4.18e-12!9;UBERON:0010009!4.18e-12!9;UBERON:0010011!4.18e-12!9;UBERON:0000454!4.18e-12!9;UBERON:0000073!5.26e-12!94;UBERON:0001016!5.26e-12!94;UBERON:0009663!1.31e-11!7;UBERON:0003056!8.18e-11!61;UBERON:0000025!1.11e-10!194;UBERON:0001871!1.67e-10!7;UBERON:0002619!4.92e-10!22;UBERON:0004111!9.52e-10!241;UBERON:0000477!2.32e-09!286;UBERON:0001950!3.22e-09!20;UBERON:0000956!1.34e-08!25;UBERON:0000203!1.34e-08!25;UBERON:0003978!1.68e-08!3;UBERON:0009751!1.68e-08!3;UBERON:0000946!1.68e-08!3;UBERON:0002523!1.68e-08!3;UBERON:0005983!1.68e-08!3;UBERON:0002165!1.68e-08!3;UBERON:0002062!1.68e-08!3;UBERON:0007280!1.68e-08!3;UBERON:0000119!5.67e-08!312;UBERON:0000153!8.99e-08!129;UBERON:0007811!8.99e-08!129;UBERON:0000481!1.15e-07!347;UBERON:0000483!1.16e-07!309;UBERON:0000033!1.16e-07!123;UBERON:0006331!1.32e-07!3;UBERON:0002771!1.32e-07!3;UBERON:0000988!2.67e-07!3;UBERON:0002298!9.41e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;3.16e-18;1!UBERON:0005623;3.16e-18;1!UBERON:0000989;8.72e-18;1!UBERON:0008811;8.72e-18;1!UBERON:0003978;6.14e-07;3!UBERON:0000946;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.66e-18,1;UBERON:0005623,2.66e-18,1;UBERON:0000989,4.44e-18,1;UBERON:0008811,4.44e-18,1;UBERON:0006258,4.44e-18,1;UBERON:0005876,4.44e-18,1;UBERON:0004874,4.44e-18,1;UBERON:0003978,5.80e-07,3;UBERON:0009751,5.80e-07,3;UBERON:0000946,5.80e-07,3;UBERON:0002523,5.80e-07,3;UBERON:0005983,5.80e-07,3;UBERON:0002165,5.80e-07,3;UBERON:0002062,5.80e-07,3;UBERON:0007280,5.80e-07,3 | |||
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|short_description=p9@RGS5 | |||
}} |
Revision as of 01:28, 12 September 2013
Short description: | p9@RGS5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RGS5_5end |
Coexpression cluster: | NA |
Association with transcript: | 126bp_to_AL157502_5end |
EntrezGene: | RGS5 |
HGNC: | 10001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 6.14e-07 | 3 |
cardiac muscle myoblast | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 2.66e-18 | 1 |
semi-lunar valve | 2.66e-18 | 1 |
penis | 4.44e-18 | 1 |
intromittent organ | 4.44e-18 | 1 |
lateral plate mesenchyme | 4.44e-18 | 1 |
undifferentiated genital tubercle | 4.44e-18 | 1 |
somatopleure | 4.44e-18 | 1 |
valve | 5.80e-07 | 3 |
cardiac mesenchyme | 5.80e-07 | 3 |
cardial valve | 5.80e-07 | 3 |
tunica intima | 5.80e-07 | 3 |
heart layer | 5.80e-07 | 3 |
endocardium | 5.80e-07 | 3 |
endocardial cushion | 5.80e-07 | 3 |
presumptive endocardium | 5.80e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.