FFCP PHASE1:Hg19::chr1:158801195..158801202,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4332|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7183|TSSclassifier=S|UniProt=P41218,Q5VUU6|association_with_transcript=27bp_to_NM_002432,uc001fsz.1_5end|coexpression_cluster_id=C2245|description=CAGE_peak_5_at_MNDA_5end|id=chr1:158801195..158801202,+|ontology_enrichment_celltype=CL:0002057!1.18e-63!42;CL:0000766!7.99e-60!76;CL:0000860!1.80e-58!45;CL:0002009!3.25e-55!65;CL:0002194!4.49e-55!63;CL:0000576!4.49e-55!63;CL:0000040!4.49e-55!63;CL:0000559!4.49e-55!63;CL:0000557!2.32e-51!71;CL:0000839!3.72e-50!70;CL:0000738!2.22e-48!140;CL:0000763!2.92e-48!112;CL:0000049!2.92e-48!112;CL:0000037!2.99e-42!172;CL:0000566!2.99e-42!172;CL:0002087!3.59e-40!119;CL:0002032!5.69e-39!165;CL:0000837!5.69e-39!165;CL:0000988!1.05e-38!182;CL:0002031!8.56e-36!124;CL:0002393!1.57e-16!9;CL:0002397!1.57e-16!9;CL:0000134!5.85e-10!358;CL:0002320!2.09e-09!365;CL:0000094!1.33e-08!8;CL:0000219!1.70e-07!390;CL:0000775!2.95e-07!3|ontology_enrichment_celltype_v019=CL:0000860;2.85e-64;33!CL:0002057;2.85e-64;33!CL:0000576;1.04e-55;48!CL:0000473;1.79e-45;39!CL:0000234;1.79e-45;39!CL:0000766;1.30e-38;69!CL:0000763;2.59e-18;100!CL:0000094;1.44e-17;8!CL:0002393;9.24e-17;6!CL:0002397;9.24e-17;6!CL:0000775;1.02e-13;3!CL:0002087;1.70e-13;104!CL:0000081;1.35e-12;11!CL:0000875;4.21e-12;3!CL:0002396;4.21e-12;3!CL:0000767;1.04e-11;3!CL:0000738;5.05e-11;136!CL:0000988;1.40e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,3.26e-99,42;CL:0002057,3.26e-99,42;CL:0000473,8.58e-86,48;CL:0000234,8.58e-86,48;CL:0000766,8.51e-81,72;CL:0002194,4.27e-71,59;CL:0000576,4.27e-71,59;CL:0000040,4.27e-71,59;CL:0000559,4.27e-71,59;CL:0002009,1.56e-68,61;CL:0000839,8.48e-63,66;CL:0000557,9.43e-62,67;CL:0000763,4.44e-51,108;CL:0000049,4.44e-51,108;CL:0000738,2.51e-43,136;CL:0002087,2.91e-37,115;CL:0000037,2.49e-33,168;CL:0002032,2.38e-31,161;CL:0000837,2.38e-31,161;CL:0000988,3.64e-31,177;CL:0002031,4.68e-31,120;CL:0002393,4.72e-27,9;CL:0002397,4.72e-27,9;CL:0000094,1.91e-17,8;CL:0000775,1.02e-13,3;CL:0000081,1.64e-12,11;CL:0000875,2.65e-12,3;CL:0002396,2.65e-12,3;CL:0000767,1.49e-11,3;CL:0000134,6.79e-11,354;CL:0002320,1.68e-10,361;CL:0000219,4.05e-09,386;CL:0000048,1.95e-07,427;CL:0000723,3.33e-07,433;CL:0000034,6.61e-07,441|ontology_enrichment_development_v019=CL:0002057;1.50e-73;42!CL:0000049;4.03e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.84e-60!102;UBERON:0003061!2.84e-60!102;UBERON:0002193!4.15e-55!112;UBERON:0002371!8.08e-44!80;UBERON:0001474!1.14e-39!86;UBERON:0004765!1.78e-31!101;UBERON:0001434!1.78e-31!101;UBERON:0002405!4.32e-31!115;UBERON:0003081!2.22e-22!216;UBERON:0000178!5.67e-17!15;UBERON:0000179!5.67e-17!15;UBERON:0000463!5.67e-17!15;UBERON:0002204!5.12e-14!167;UBERON:0002384!4.16e-09!375;UBERON:0007023!2.65e-08!115|ontology_enrichment_uberon_v019=UBERON:0000178;2.13e-30;15!UBERON:0000179;2.13e-30;15!UBERON:0000463;2.13e-30;15!UBERON:0002390;2.82e-12;32!UBERON:0002193;5.69e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.53e-74,98;UBERON:0003061,1.53e-74,98;UBERON:0002193,8.10e-67,108;UBERON:0002371,1.47e-53,76;UBERON:0001474,4.37e-49,82;UBERON:0004765,4.89e-44,90;UBERON:0002405,2.29e-42,93;UBERON:0001434,7.48e-39,100;UBERON:0003081,3.60e-31,203;UBERON:0000178,1.54e-30,15;UBERON:0000179,1.54e-30,15;UBERON:0000463,1.54e-30,15;UBERON:0002204,4.68e-20,167;UBERON:0000926,1.26e-16,315;UBERON:0004120,1.26e-16,315;UBERON:0006603,1.26e-16,315;UBERON:0002384,5.76e-10,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.410502947249729,0.157421562627358,1.57345710739562,1.53531759238885,1.08371286321253,0,0,0,0,0,0,1.10799081706375,2.4065333696417,0.651032612147555,0.223915474239924,0,1.03030227053675,1.59938062657521,1.88937971844405,0.970336244751265,1.39457422143411,1.23350366406548,0.929119112685311,2.3015391385772,3.84241059793651,2.36482229888585,3.44745680736619,2.5819387343353,1.35426486594342,1.69418105588344,1.36453075028923,1.57306439111559,2.75475503133812,0.962787081228281,0,3.29851300186716,2.39356389145958,0.426224750532694,1.16083695451434,0.56738522469114,0,3.51748131359441,1.5644487552606,2.17188844705117,1.81619850790011,1.47311054395026,1.89877432464531,5.70389273042243,4.46469029926591,4.19317291016752,8.42464733598713,12.0141514273205,13.8224004559489,1.99508920618874,1.79025009479181,3.10529061399878,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0.255973222308837,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531831842075461,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.936017060556951,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7183 | |||
|TSSclassifier=S | |||
|UniProt=P41218,Q5VUU6 | |||
|association_with_transcript=27bp_to_NM_002432,uc001fsz.1_5end | |||
|coexpression_cluster_id=C2245 | |||
|description=CAGE_peak_5_at_MNDA_5end | |||
|id=chr1:158801195..158801202,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.18e-63!42;CL:0000766!7.99e-60!76;CL:0000860!1.80e-58!45;CL:0002009!3.25e-55!65;CL:0002194!4.49e-55!63;CL:0000576!4.49e-55!63;CL:0000040!4.49e-55!63;CL:0000559!4.49e-55!63;CL:0000557!2.32e-51!71;CL:0000839!3.72e-50!70;CL:0000738!2.22e-48!140;CL:0000763!2.92e-48!112;CL:0000049!2.92e-48!112;CL:0000037!2.99e-42!172;CL:0000566!2.99e-42!172;CL:0002087!3.59e-40!119;CL:0002032!5.69e-39!165;CL:0000837!5.69e-39!165;CL:0000988!1.05e-38!182;CL:0002031!8.56e-36!124;CL:0002393!1.57e-16!9;CL:0002397!1.57e-16!9;CL:0000134!5.85e-10!358;CL:0002320!2.09e-09!365;CL:0000094!1.33e-08!8;CL:0000219!1.70e-07!390;CL:0000775!2.95e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.85e-64;33!CL:0002057;2.85e-64;33!CL:0000576;1.04e-55;48!CL:0000473;1.79e-45;39!CL:0000234;1.79e-45;39!CL:0000766;1.30e-38;69!CL:0000763;2.59e-18;100!CL:0000094;1.44e-17;8!CL:0002393;9.24e-17;6!CL:0002397;9.24e-17;6!CL:0000775;1.02e-13;3!CL:0002087;1.70e-13;104!CL:0000081;1.35e-12;11!CL:0000875;4.21e-12;3!CL:0002396;4.21e-12;3!CL:0000767;1.04e-11;3!CL:0000738;5.05e-11;136!CL:0000988;1.40e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.26e-99,42;CL:0002057,3.26e-99,42;CL:0000473,8.58e-86,48;CL:0000234,8.58e-86,48;CL:0000766,8.51e-81,72;CL:0002194,4.27e-71,59;CL:0000576,4.27e-71,59;CL:0000040,4.27e-71,59;CL:0000559,4.27e-71,59;CL:0002009,1.56e-68,61;CL:0000839,8.48e-63,66;CL:0000557,9.43e-62,67;CL:0000763,4.44e-51,108;CL:0000049,4.44e-51,108;CL:0000738,2.51e-43,136;CL:0002087,2.91e-37,115;CL:0000037,2.49e-33,168;CL:0002032,2.38e-31,161;CL:0000837,2.38e-31,161;CL:0000988,3.64e-31,177;CL:0002031,4.68e-31,120;CL:0002393,4.72e-27,9;CL:0002397,4.72e-27,9;CL:0000094,1.91e-17,8;CL:0000775,1.02e-13,3;CL:0000081,1.64e-12,11;CL:0000875,2.65e-12,3;CL:0002396,2.65e-12,3;CL:0000767,1.49e-11,3;CL:0000134,6.79e-11,354;CL:0002320,1.68e-10,361;CL:0000219,4.05e-09,386;CL:0000048,1.95e-07,427;CL:0000723,3.33e-07,433;CL:0000034,6.61e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-73;42!CL:0000049;4.03e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.84e-60!102;UBERON:0003061!2.84e-60!102;UBERON:0002193!4.15e-55!112;UBERON:0002371!8.08e-44!80;UBERON:0001474!1.14e-39!86;UBERON:0004765!1.78e-31!101;UBERON:0001434!1.78e-31!101;UBERON:0002405!4.32e-31!115;UBERON:0003081!2.22e-22!216;UBERON:0000178!5.67e-17!15;UBERON:0000179!5.67e-17!15;UBERON:0000463!5.67e-17!15;UBERON:0002204!5.12e-14!167;UBERON:0002384!4.16e-09!375;UBERON:0007023!2.65e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.13e-30;15!UBERON:0000179;2.13e-30;15!UBERON:0000463;2.13e-30;15!UBERON:0002390;2.82e-12;32!UBERON:0002193;5.69e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.53e-74,98;UBERON:0003061,1.53e-74,98;UBERON:0002193,8.10e-67,108;UBERON:0002371,1.47e-53,76;UBERON:0001474,4.37e-49,82;UBERON:0004765,4.89e-44,90;UBERON:0002405,2.29e-42,93;UBERON:0001434,7.48e-39,100;UBERON:0003081,3.60e-31,203;UBERON:0000178,1.54e-30,15;UBERON:0000179,1.54e-30,15;UBERON:0000463,1.54e-30,15;UBERON:0002204,4.68e-20,167;UBERON:0000926,1.26e-16,315;UBERON:0004120,1.26e-16,315;UBERON:0006603,1.26e-16,315;UBERON:0002384,5.76e-10,371 | |||
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|short_description=p5@MNDA | |||
}} |
Revision as of 01:04, 12 September 2013
Short description: | p5@MNDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MNDA_5end |
Coexpression cluster: | C2245_Mast_CD14_Synoviocyte_Neutrophils_Dendritic_CD14CD16_Whole |
Association with transcript: | 27bp_to_NM_002432, uc001fsz.1_5end |
EntrezGene: | MNDA |
HGNC: | 7183 |
UniProt: | P41218Q5VUU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.53e-74 | 98 |
blood island | 1.53e-74 | 98 |
hemolymphoid system | 8.10e-67 | 108 |
bone marrow | 1.47e-53 | 76 |
bone element | 4.37e-49 | 82 |
skeletal element | 4.89e-44 | 90 |
immune system | 2.29e-42 | 93 |
skeletal system | 7.48e-39 | 100 |
lateral plate mesoderm | 3.60e-31 | 203 |
blood | 1.54e-30 | 15 |
haemolymphatic fluid | 1.54e-30 | 15 |
organism substance | 1.54e-30 | 15 |
musculoskeletal system | 4.68e-20 | 167 |
mesoderm | 1.26e-16 | 315 |
mesoderm-derived structure | 1.26e-16 | 315 |
presumptive mesoderm | 1.26e-16 | 315 |
connective tissue | 5.76e-10 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.