FFCP PHASE1:Hg19::chr1:15671561..15671572,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=114827|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29408|TSSclassifier=S|UniProt=|association_with_transcript=-6bp_to_uc010obl.1_5end|coexpression_cluster_id=C81|description=CAGE_peak_11_at_FHAD1_5end|id=chr1:15671561..15671572,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;3.81e-21;2!UBERON:0008947;4.09e-13;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.46e-32!115;UBERON:0001049!7.17e-21!57;UBERON:0005068!7.17e-21!57;UBERON:0006241!7.17e-21!57;UBERON:0007135!7.17e-21!57;UBERON:0000349!7.45e-18!5;UBERON:0002298!1.85e-17!8;UBERON:0003076!1.88e-17!15;UBERON:0003057!1.88e-17!15;UBERON:0002616!2.02e-17!59;UBERON:0000988!3.16e-17!3;UBERON:0000955!2.50e-16!69;UBERON:0006238!2.50e-16!69;UBERON:0004733!3.10e-16!12;UBERON:0002028!3.10e-16!12;UBERON:0007277!3.10e-16!12;UBERON:0001017!3.09e-15!82;UBERON:0004732!6.04e-15!13;UBERON:0005743!2.22e-14!86;UBERON:0003075!8.59e-13!86;UBERON:0007284!8.59e-13!86;UBERON:0000073!1.03e-12!94;UBERON:0001016!1.03e-12!94;UBERON:0000341!1.12e-12!2;UBERON:0001954!2.22e-12!2;UBERON:0003022!2.22e-12!2;UBERON:0002421!2.22e-12!2;UBERON:0002600!2.22e-12!2;UBERON:0002148!2.35e-12!2;UBERON:0009662!2.35e-12!2;UBERON:0002346!4.39e-12!90;UBERON:0000153!4.33e-11!129;UBERON:0007811!4.33e-11!129;UBERON:0002680!5.99e-10!9;UBERON:0002308!5.99e-10!9;UBERON:0000125!5.99e-10!9;UBERON:0001895!5.99e-10!9;UBERON:0010092!5.99e-10!9;UBERON:0002780!4.67e-09!41;UBERON:0001890!4.67e-09!41;UBERON:0006240!4.67e-09!41;UBERON:0000033!4.78e-09!123;UBERON:0002020!7.36e-09!34;UBERON:0003528!7.36e-09!34;UBERON:0003080!8.18e-09!42;UBERON:0001896!1.14e-08!3;UBERON:0005290!1.14e-08!3;UBERON:0010096!1.14e-08!3;UBERON:0006331!1.60e-08!3;UBERON:0000025!3.64e-08!194;UBERON:0001301!2.36e-07!1;UBERON:0002171!2.66e-07!1;UBERON:0006518!2.66e-07!1;UBERON:0008949!2.66e-07!1;UBERON:0000101!2.66e-07!1;UBERON:0002167!2.66e-07!1;UBERON:0002791!5.39e-07!33;UBERON:0006834!6.02e-07!1;UBERON:0002336!7.57e-07!1;UBERON:0001018!7.57e-07!1;UBERON:0002473!7.57e-07!1;UBERON:0005340!7.57e-07!1;UBERON:0002316!7.57e-07!1;UBERON:0003544!7.57e-07!1;UBERON:0001020!7.57e-07!1;UBERON:0005970!7.57e-07!1;UBERON:0002437!7.57e-07!1;UBERON:0003112!8.49e-07!1;UBERON:0000032!8.49e-07!1;UBERON:0005253!8.49e-07!1;UBERON:0003128!8.49e-07!1;UBERON:0002241!8.49e-07!1;UBERON:0001703!8.49e-07!1;UBERON:0004761!8.49e-07!1;UBERON:0009617!8.49e-07!1;UBERON:0001893!9.03e-07!34|ontology_enrichment_uberon_v019=UBERON:0001301;9.91e-41;1!UBERON:0002171;2.70e-40;1!UBERON:0006518;2.70e-40;1!UBERON:0008949;2.70e-40;1!UBERON:0000101;2.70e-40;1!UBERON:0002167;2.70e-40;1!UBERON:0003127;3.81e-21;2!UBERON:0001954;6.30e-21;2!UBERON:0003022;6.30e-21;2!UBERON:0002421;6.30e-21;2!UBERON:0002600;6.30e-21;2!UBERON:0006947;1.40e-14;3!UBERON:0004054;1.40e-14;3!UBERON:0005904;2.80e-11;4!UBERON:0000349;3.35e-09;5!UBERON:0005178;7.50e-09;34!UBERON:0002224;7.50e-09;34!UBERON:0002048;3.21e-08;22!UBERON:0000117;3.21e-08;22!UBERON:0000171;3.21e-08;22!UBERON:0000170;3.21e-08;22!UBERON:0000065;1.95e-07;44!UBERON:0003126;5.38e-07;7!UBERON:0001005;5.38e-07;7!UBERON:0005181;8.56e-07;35|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.48e-40,1;UBERON:0002171,3.30e-40,1;UBERON:0006518,3.30e-40,1;UBERON:0008949,3.30e-40,1;UBERON:0000101,3.30e-40,1;UBERON:0002167,3.30e-40,1;UBERON:0003127,3.11e-21,2;UBERON:0001954,5.70e-21,2;UBERON:0003022,5.70e-21,2;UBERON:0002421,5.70e-21,2;UBERON:0002600,5.70e-21,2;UBERON:0006947,1.60e-14,3;UBERON:0004054,1.60e-14,3;UBERON:0005178,2.57e-11,34;UBERON:0002224,2.57e-11,34;UBERON:0005904,3.10e-11,4;UBERON:0005181,5.12e-11,35;UBERON:0008947,3.28e-10,38;UBERON:0003258,3.28e-10,38;UBERON:0000349,3.22e-09,5;UBERON:0002048,3.27e-08,22;UBERON:0000117,3.27e-08,22;UBERON:0000171,3.27e-08,22;UBERON:0000170,3.27e-08,22;UBERON:0005597,3.27e-08,22;UBERON:0000118,3.27e-08,22;UBERON:0000915,1.15e-07,52;UBERON:0000065,2.08e-07,54;UBERON:0003126,5.08e-07,7;UBERON:0001005,5.08e-07,7;UBERON:0005177,6.20e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=114827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29408 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_uc010obl.1_5end | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_11_at_FHAD1_5end | |||
|id=chr1:15671561..15671572,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.81e-21;2!UBERON:0008947;4.09e-13;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-32!115;UBERON:0001049!7.17e-21!57;UBERON:0005068!7.17e-21!57;UBERON:0006241!7.17e-21!57;UBERON:0007135!7.17e-21!57;UBERON:0000349!7.45e-18!5;UBERON:0002298!1.85e-17!8;UBERON:0003076!1.88e-17!15;UBERON:0003057!1.88e-17!15;UBERON:0002616!2.02e-17!59;UBERON:0000988!3.16e-17!3;UBERON:0000955!2.50e-16!69;UBERON:0006238!2.50e-16!69;UBERON:0004733!3.10e-16!12;UBERON:0002028!3.10e-16!12;UBERON:0007277!3.10e-16!12;UBERON:0001017!3.09e-15!82;UBERON:0004732!6.04e-15!13;UBERON:0005743!2.22e-14!86;UBERON:0003075!8.59e-13!86;UBERON:0007284!8.59e-13!86;UBERON:0000073!1.03e-12!94;UBERON:0001016!1.03e-12!94;UBERON:0000341!1.12e-12!2;UBERON:0001954!2.22e-12!2;UBERON:0003022!2.22e-12!2;UBERON:0002421!2.22e-12!2;UBERON:0002600!2.22e-12!2;UBERON:0002148!2.35e-12!2;UBERON:0009662!2.35e-12!2;UBERON:0002346!4.39e-12!90;UBERON:0000153!4.33e-11!129;UBERON:0007811!4.33e-11!129;UBERON:0002680!5.99e-10!9;UBERON:0002308!5.99e-10!9;UBERON:0000125!5.99e-10!9;UBERON:0001895!5.99e-10!9;UBERON:0010092!5.99e-10!9;UBERON:0002780!4.67e-09!41;UBERON:0001890!4.67e-09!41;UBERON:0006240!4.67e-09!41;UBERON:0000033!4.78e-09!123;UBERON:0002020!7.36e-09!34;UBERON:0003528!7.36e-09!34;UBERON:0003080!8.18e-09!42;UBERON:0001896!1.14e-08!3;UBERON:0005290!1.14e-08!3;UBERON:0010096!1.14e-08!3;UBERON:0006331!1.60e-08!3;UBERON:0000025!3.64e-08!194;UBERON:0001301!2.36e-07!1;UBERON:0002171!2.66e-07!1;UBERON:0006518!2.66e-07!1;UBERON:0008949!2.66e-07!1;UBERON:0000101!2.66e-07!1;UBERON:0002167!2.66e-07!1;UBERON:0002791!5.39e-07!33;UBERON:0006834!6.02e-07!1;UBERON:0002336!7.57e-07!1;UBERON:0001018!7.57e-07!1;UBERON:0002473!7.57e-07!1;UBERON:0005340!7.57e-07!1;UBERON:0002316!7.57e-07!1;UBERON:0003544!7.57e-07!1;UBERON:0001020!7.57e-07!1;UBERON:0005970!7.57e-07!1;UBERON:0002437!7.57e-07!1;UBERON:0003112!8.49e-07!1;UBERON:0000032!8.49e-07!1;UBERON:0005253!8.49e-07!1;UBERON:0003128!8.49e-07!1;UBERON:0002241!8.49e-07!1;UBERON:0001703!8.49e-07!1;UBERON:0004761!8.49e-07!1;UBERON:0009617!8.49e-07!1;UBERON:0001893!9.03e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;9.91e-41;1!UBERON:0002171;2.70e-40;1!UBERON:0006518;2.70e-40;1!UBERON:0008949;2.70e-40;1!UBERON:0000101;2.70e-40;1!UBERON:0002167;2.70e-40;1!UBERON:0003127;3.81e-21;2!UBERON:0001954;6.30e-21;2!UBERON:0003022;6.30e-21;2!UBERON:0002421;6.30e-21;2!UBERON:0002600;6.30e-21;2!UBERON:0006947;1.40e-14;3!UBERON:0004054;1.40e-14;3!UBERON:0005904;2.80e-11;4!UBERON:0000349;3.35e-09;5!UBERON:0005178;7.50e-09;34!UBERON:0002224;7.50e-09;34!UBERON:0002048;3.21e-08;22!UBERON:0000117;3.21e-08;22!UBERON:0000171;3.21e-08;22!UBERON:0000170;3.21e-08;22!UBERON:0000065;1.95e-07;44!UBERON:0003126;5.38e-07;7!UBERON:0001005;5.38e-07;7!UBERON:0005181;8.56e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.48e-40,1;UBERON:0002171,3.30e-40,1;UBERON:0006518,3.30e-40,1;UBERON:0008949,3.30e-40,1;UBERON:0000101,3.30e-40,1;UBERON:0002167,3.30e-40,1;UBERON:0003127,3.11e-21,2;UBERON:0001954,5.70e-21,2;UBERON:0003022,5.70e-21,2;UBERON:0002421,5.70e-21,2;UBERON:0002600,5.70e-21,2;UBERON:0006947,1.60e-14,3;UBERON:0004054,1.60e-14,3;UBERON:0005178,2.57e-11,34;UBERON:0002224,2.57e-11,34;UBERON:0005904,3.10e-11,4;UBERON:0005181,5.12e-11,35;UBERON:0008947,3.28e-10,38;UBERON:0003258,3.28e-10,38;UBERON:0000349,3.22e-09,5;UBERON:0002048,3.27e-08,22;UBERON:0000117,3.27e-08,22;UBERON:0000171,3.27e-08,22;UBERON:0000170,3.27e-08,22;UBERON:0005597,3.27e-08,22;UBERON:0000118,3.27e-08,22;UBERON:0000915,1.15e-07,52;UBERON:0000065,2.08e-07,54;UBERON:0003126,5.08e-07,7;UBERON:0001005,5.08e-07,7;UBERON:0005177,6.20e-07,101 | |||
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|short_description=p11@FHAD1 | |||
}} |
Revision as of 00:57, 12 September 2013
Short description: | p11@FHAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_FHAD1_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | -6bp_to_uc010obl.1_5end |
EntrezGene: | FHAD1 |
HGNC: | 29408 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.48e-40 | 1 |
lower lobe of right lung | 3.30e-40 | 1 |
right lung lobe | 3.30e-40 | 1 |
lower lobe of lung | 3.30e-40 | 1 |
lobe of lung | 3.30e-40 | 1 |
right lung | 3.30e-40 | 1 |
open tracheal system trachea | 3.11e-21 | 2 |
Ammon's horn | 5.70e-21 | 2 |
lobe parts of cerebral cortex | 5.70e-21 | 2 |
hippocampal formation | 5.70e-21 | 2 |
limbic lobe | 5.70e-21 | 2 |
male genital duct | 1.60e-14 | 3 |
internal male genitalia | 1.60e-14 | 3 |
thoracic cavity element | 2.57e-11 | 34 |
thoracic cavity | 2.57e-11 | 34 |
duct of male reproductive system | 3.10e-11 | 4 |
thoracic segment organ | 5.12e-11 | 35 |
respiratory primordium | 3.28e-10 | 38 |
endoderm of foregut | 3.28e-10 | 38 |
limbic system | 3.22e-09 | 5 |
lung | 3.27e-08 | 22 |
respiratory tube | 3.27e-08 | 22 |
respiration organ | 3.27e-08 | 22 |
pair of lungs | 3.27e-08 | 22 |
lung primordium | 3.27e-08 | 22 |
lung bud | 3.27e-08 | 22 |
thoracic segment of trunk | 1.15e-07 | 52 |
respiratory tract | 2.08e-07 | 54 |
trachea | 5.08e-07 | 7 |
respiratory airway | 5.08e-07 | 7 |
trunk region element | 6.20e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.