FFCP PHASE1:Hg19::chr1:150583889..150583898,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1771|description=CAGE_peak_at_chr1:150583889..150583898,-|id=chr1:150583889..150583898,-|ontology_enrichment_celltype=CL:0002057!8.00e-83!42;CL:0000860!1.19e-76!45;CL:0002009!2.18e-55!65;CL:0000766!2.47e-55!76;CL:0002194!5.33e-51!63;CL:0000576!5.33e-51!63;CL:0000040!5.33e-51!63;CL:0000559!5.33e-51!63;CL:0000557!6.30e-50!71;CL:0000839!5.12e-45!70;CL:0000763!2.34e-40!112;CL:0000049!2.34e-40!112;CL:0000738!4.32e-39!140;CL:0002087!3.66e-31!119;CL:0000037!1.28e-29!172;CL:0000566!1.28e-29!172;CL:0002031!9.84e-28!124;CL:0000988!2.42e-27!182;CL:0002032!1.03e-26!165;CL:0000837!1.03e-26!165;CL:0002393!3.40e-12!9;CL:0002397!3.40e-12!9;CL:0002320!4.08e-11!365;CL:0000134!7.28e-11!358;CL:0000767!5.74e-10!3;CL:0000094!6.88e-10!8;CL:0000842!1.42e-09!3;CL:0000219!7.01e-09!390;CL:0000048!1.38e-07!430;CL:0000034!1.55e-07!444;CL:0000723!2.56e-07!436;CL:0000224!2.81e-07!4;CL:0000081!4.47e-07!11;CL:0001014!7.90e-07!2;CL:0001016!7.90e-07!2|ontology_enrichment_celltype_v019=CL:0000860;3.49e-38;33!CL:0002057;3.49e-38;33!CL:0000473;9.83e-30;39!CL:0000234;9.83e-30;39!CL:0000576;3.25e-28;48!CL:0000766;3.34e-25;69!CL:0002393;1.27e-14;6!CL:0002397;1.27e-14;6!CL:0000775;6.52e-14;3!CL:0000094;2.27e-11;8!CL:0000763;6.94e-11;100!CL:0000081;2.08e-08;11!CL:0002087;3.26e-08;104|ontology_enrichment_celltype_v019_2=CL:0000860,2.03e-48,42;CL:0002057,2.03e-48,42;CL:0000473,4.31e-42,48;CL:0000234,4.31e-42,48;CL:0000766,1.84e-39,72;CL:0002194,3.17e-33,59;CL:0000576,3.17e-33,59;CL:0000040,3.17e-33,59;CL:0000559,3.17e-33,59;CL:0002009,4.43e-32,61;CL:0000839,1.62e-29,66;CL:0000557,4.77e-29,67;CL:0000763,1.43e-25,108;CL:0000049,1.43e-25,108;CL:0000738,2.35e-22,136;CL:0002087,1.61e-18,115;CL:0000037,1.36e-17,168;CL:0000988,1.46e-16,177;CL:0002032,2.56e-16,161;CL:0000837,2.56e-16,161;CL:0002031,2.71e-15,120;CL:0000775,6.96e-14,3;CL:0000094,2.31e-11,8;CL:0002393,4.45e-10,9;CL:0002397,4.45e-10,9;CL:0000081,2.11e-08,11;CL:0000134,8.07e-07,354|ontology_enrichment_development_v019=CL:0002057;1.78e-35;42!CL:0000049;2.11e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.46e-53!102;UBERON:0003061!8.46e-53!102;UBERON:0002193!4.48e-47!112;UBERON:0002371!2.95e-43!80;UBERON:0001474!1.41e-39!86;UBERON:0004765!2.94e-34!101;UBERON:0001434!2.94e-34!101;UBERON:0002405!3.43e-27!115;UBERON:0003081!6.61e-19!216;UBERON:0002204!5.47e-18!167;UBERON:0000178!5.97e-15!15;UBERON:0000179!5.97e-15!15;UBERON:0000463!5.97e-15!15;UBERON:0002384!1.72e-10!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.33e-28,98;UBERON:0003061,2.33e-28,98;UBERON:0002193,1.63e-25,108;UBERON:0002371,2.20e-25,76;UBERON:0001474,2.22e-23,82;UBERON:0004765,4.04e-21,90;UBERON:0002405,2.27e-20,93;UBERON:0001434,8.54e-19,100;UBERON:0003081,2.36e-12,203;UBERON:0002204,2.47e-10,167;UBERON:0000926,6.05e-07,315;UBERON:0004120,6.05e-07,315;UBERON:0006603,6.05e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.928896739896456,0,0,0.369754010166788,0,0,0,1.66198622559563,1.80490002723128,1.73608696572681,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,0.464858073811369,0,1.54853185447552,1.7261543539329,1.0246428261164,0.47296445977717,3.7922024881028,3.22742341791913,2.70852973188684,0.941211697713023,0,0.674170453335254,5.81559395504715,0.962787081228281,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,0.580418477257168,0,0,1.7587406567972,2.08593167368081,2.17188844705117,1.21079900526674,0.736555271975129,0.632924774881769,0.633765858935825,0.425208599930087,0,1.12328631146495,0.750884464207532,0.48217676009124,0.855038231223746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,2.24702107184155,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,4.74571241800957,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,0,1.29694662238543,0.540031437238115,0.79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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1771 | |||
|description=CAGE_peak_at_chr1:150583889..150583898,- | |||
|id=chr1:150583889..150583898,- | |||
|ontology_enrichment_celltype=CL:0002057!8.00e-83!42;CL:0000860!1.19e-76!45;CL:0002009!2.18e-55!65;CL:0000766!2.47e-55!76;CL:0002194!5.33e-51!63;CL:0000576!5.33e-51!63;CL:0000040!5.33e-51!63;CL:0000559!5.33e-51!63;CL:0000557!6.30e-50!71;CL:0000839!5.12e-45!70;CL:0000763!2.34e-40!112;CL:0000049!2.34e-40!112;CL:0000738!4.32e-39!140;CL:0002087!3.66e-31!119;CL:0000037!1.28e-29!172;CL:0000566!1.28e-29!172;CL:0002031!9.84e-28!124;CL:0000988!2.42e-27!182;CL:0002032!1.03e-26!165;CL:0000837!1.03e-26!165;CL:0002393!3.40e-12!9;CL:0002397!3.40e-12!9;CL:0002320!4.08e-11!365;CL:0000134!7.28e-11!358;CL:0000767!5.74e-10!3;CL:0000094!6.88e-10!8;CL:0000842!1.42e-09!3;CL:0000219!7.01e-09!390;CL:0000048!1.38e-07!430;CL:0000034!1.55e-07!444;CL:0000723!2.56e-07!436;CL:0000224!2.81e-07!4;CL:0000081!4.47e-07!11;CL:0001014!7.90e-07!2;CL:0001016!7.90e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.49e-38;33!CL:0002057;3.49e-38;33!CL:0000473;9.83e-30;39!CL:0000234;9.83e-30;39!CL:0000576;3.25e-28;48!CL:0000766;3.34e-25;69!CL:0002393;1.27e-14;6!CL:0002397;1.27e-14;6!CL:0000775;6.52e-14;3!CL:0000094;2.27e-11;8!CL:0000763;6.94e-11;100!CL:0000081;2.08e-08;11!CL:0002087;3.26e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.03e-48,42;CL:0002057,2.03e-48,42;CL:0000473,4.31e-42,48;CL:0000234,4.31e-42,48;CL:0000766,1.84e-39,72;CL:0002194,3.17e-33,59;CL:0000576,3.17e-33,59;CL:0000040,3.17e-33,59;CL:0000559,3.17e-33,59;CL:0002009,4.43e-32,61;CL:0000839,1.62e-29,66;CL:0000557,4.77e-29,67;CL:0000763,1.43e-25,108;CL:0000049,1.43e-25,108;CL:0000738,2.35e-22,136;CL:0002087,1.61e-18,115;CL:0000037,1.36e-17,168;CL:0000988,1.46e-16,177;CL:0002032,2.56e-16,161;CL:0000837,2.56e-16,161;CL:0002031,2.71e-15,120;CL:0000775,6.96e-14,3;CL:0000094,2.31e-11,8;CL:0002393,4.45e-10,9;CL:0002397,4.45e-10,9;CL:0000081,2.11e-08,11;CL:0000134,8.07e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-35;42!CL:0000049;2.11e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.46e-53!102;UBERON:0003061!8.46e-53!102;UBERON:0002193!4.48e-47!112;UBERON:0002371!2.95e-43!80;UBERON:0001474!1.41e-39!86;UBERON:0004765!2.94e-34!101;UBERON:0001434!2.94e-34!101;UBERON:0002405!3.43e-27!115;UBERON:0003081!6.61e-19!216;UBERON:0002204!5.47e-18!167;UBERON:0000178!5.97e-15!15;UBERON:0000179!5.97e-15!15;UBERON:0000463!5.97e-15!15;UBERON:0002384!1.72e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.33e-28,98;UBERON:0003061,2.33e-28,98;UBERON:0002193,1.63e-25,108;UBERON:0002371,2.20e-25,76;UBERON:0001474,2.22e-23,82;UBERON:0004765,4.04e-21,90;UBERON:0002405,2.27e-20,93;UBERON:0001434,8.54e-19,100;UBERON:0003081,2.36e-12,203;UBERON:0002204,2.47e-10,167;UBERON:0000926,6.05e-07,315;UBERON:0004120,6.05e-07,315;UBERON:0006603,6.05e-07,315 | |||
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|short_description=p@chr1:150583889..150583898,- | |||
}} |
Revision as of 00:15, 12 September 2013
Short description: | p@chr1:150583889..150583898, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:150583889..150583898, - |
Coexpression cluster: | C1771_CD14_Neutrophils_Eosinophils_Peripheral_Whole_CD14CD16_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.03e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-48 | 42 |
defensive cell | 4.31e-42 | 48 |
phagocyte | 4.31e-42 | 48 |
myeloid leukocyte | 1.84e-39 | 72 |
monopoietic cell | 3.17e-33 | 59 |
monocyte | 3.17e-33 | 59 |
monoblast | 3.17e-33 | 59 |
promonocyte | 3.17e-33 | 59 |
macrophage dendritic cell progenitor | 4.43e-32 | 61 |
myeloid lineage restricted progenitor cell | 1.62e-29 | 66 |
granulocyte monocyte progenitor cell | 4.77e-29 | 67 |
myeloid cell | 1.43e-25 | 108 |
common myeloid progenitor | 1.43e-25 | 108 |
leukocyte | 2.35e-22 | 136 |
nongranular leukocyte | 1.61e-18 | 115 |
hematopoietic stem cell | 1.36e-17 | 168 |
hematopoietic cell | 1.46e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.56e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.56e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 2.71e-15 | 120 |
neutrophil | 6.96e-14 | 3 |
granulocyte | 2.31e-11 | 8 |
intermediate monocyte | 4.45e-10 | 9 |
CD14-positive, CD16-positive monocyte | 4.45e-10 | 9 |
blood cell | 2.11e-08 | 11 |
mesenchymal cell | 8.07e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.33e-28 | 98 |
blood island | 2.33e-28 | 98 |
hemolymphoid system | 1.63e-25 | 108 |
bone marrow | 2.20e-25 | 76 |
bone element | 2.22e-23 | 82 |
skeletal element | 4.04e-21 | 90 |
immune system | 2.27e-20 | 93 |
skeletal system | 8.54e-19 | 100 |
lateral plate mesoderm | 2.36e-12 | 203 |
musculoskeletal system | 2.47e-10 | 167 |
mesoderm | 6.05e-07 | 315 |
mesoderm-derived structure | 6.05e-07 | 315 |
presumptive mesoderm | 6.05e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.