FFCP PHASE1:Hg19::chr1:12677676..12677707,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9249|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17693|TSSclassifier=S|UniProt=O75911|association_with_transcript=29bp_to_ENST00000376223_5end|description=CAGE_peak_5_at_DHRS3_5end|id=chr1:12677676..12677707,-|ontology_enrichment_celltype=CL:0000359!4.20e-09!32;CL:0000192!6.60e-08!42;CL:0000514!6.60e-08!42;CL:0000187!2.20e-07!54;CL:0000183!6.26e-07!59;CL:0000222!7.05e-07!119|ontology_enrichment_celltype_v019=CL:0000359;3.43e-09;32|ontology_enrichment_celltype_v019_2=CL:0000359,1.72e-09,32;CL:0000192,1.12e-07,43;CL:0000514,1.12e-07,43;CL:0000187,3.89e-07,55|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!2.03e-12!118;UBERON:0000490!2.62e-11!138;UBERON:0002100!1.56e-10!216;UBERON:0004111!9.55e-10!241;UBERON:0003929!5.62e-09!54;UBERON:0000477!6.79e-09!286;UBERON:0001637!8.39e-09!42;UBERON:0003509!8.39e-09!42;UBERON:0004572!8.39e-09!42;UBERON:0005256!9.88e-09!143;UBERON:0004921!1.39e-08!129;UBERON:0004185!1.39e-08!129;UBERON:0004573!1.43e-08!33;UBERON:0004571!1.43e-08!33;UBERON:0003104!1.47e-08!238;UBERON:0009142!1.47e-08!238;UBERON:0000481!4.62e-08!347;UBERON:0000466!9.43e-08!126;UBERON:0000025!1.00e-07!194;UBERON:0005911!1.15e-07!82;UBERON:0002385!2.85e-07!63;UBERON:0001015!2.85e-07!63;UBERON:0000383!2.85e-07!63;UBERON:0001007!3.96e-07!155;UBERON:0001555!3.96e-07!155;UBERON:0007026!3.96e-07!155;UBERON:0001134!8.55e-07!61;UBERON:0002036!8.55e-07!61;UBERON:0003082!8.55e-07!61|ontology_enrichment_uberon_v019=UBERON:0004573;7.97e-08;33!UBERON:0004571;7.97e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.84e-13,199;UBERON:0003914,2.96e-12,117;UBERON:0005256,5.34e-12,122;UBERON:0003104,8.64e-10,160;UBERON:0009142,8.64e-10,160;UBERON:0003929,4.99e-09,54;UBERON:0001637,8.63e-09,42;UBERON:0003509,8.63e-09,42;UBERON:0004572,8.63e-09,42;UBERON:0004573,1.09e-08,33;UBERON:0004571,1.09e-08,33;UBERON:0004111,2.43e-08,240;UBERON:0000490,7.87e-08,148;UBERON:0005911,1.31e-07,82;UBERON:0004921,2.58e-07,118;UBERON:0002385,9.73e-07,64;UBERON:0001015,9.73e-07,64;UBERON:0000383,9.73e-07,64|phase1_expression=3.63356758541113,4.92431204949261,19.59266216934,7.00513088471913,17.4314826826642,30.5318483435129,7.59899634504932,0.631719873426831,4.70134130759709,9.82935746006035,17.4450291993107,0,0,0.74259811776028,1.98838425436749,4.70627602516243,6.02694528023977,4.38186054232424,5.85519358548608,9.84968464614303,12.4440421658994,18.1803738457291,3.43483184557268,1.64249310087461,1.12988375635323,0.61130724598361,1.14940825229924,0.472264687882075,7.86728553697808,4.98978217526377,3.8704030829019,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,5.53995408531877,3.60980005446255,6.72733699219141,10.0761963407966,16.518576966968,12.6212028140751,0,0,1.4555043671269,1.39457422143411,0,0.929119112685311,2.01384674625505,0,0.945928919554341,0.689491361473237,0,0,1.12945403725563,0.818718450173537,0.449446968890169,1.83650335422542,0.962787081228281,0,0.659702600373432,0.598390972864896,0.852449501065388,1.45104619314292,0.56738522469114,0,0.75374599577023,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,3.96513985737078,3.36305137788922,1.31692042387539,8.65522988500866,14.1483874589699,8.01845846098086,0.501559486172034,10.4295125322749,6.15482147455153,1.94826728407911,2.67385096524417,0.883817722424512,0.886135578334485,0.270803863765016,1.5370958367081,2.86130564631732,20.0614243616485,11.3303507292198,14.4901542867526,9.49034004237187,10.7016331235885,11.4989076185474,2.03956816855619,4.59864592322305,3.77990190030893,6.07247260846807,6.68987370080603,11.7195021694155,4.75226022224187,2.25862678616659,3.19966527886046,4.99722906209383,7.57687206540854,8.21127996921047,7.25784275609037,7.75576567772171,14.9169135999283,9.75227465255847,22.13312837022,23.2709862555225,2.89151321907653,4.01070328508712,3.47631645505977,0,4.37971383272372,6.90104165297695,9.53436409089025,12.9117134968895,4.58426764241994,1.45718115317017,1.11235332835329,0.97364218096405,1.0447784237956,3.19099105245276,0.238490624305342,0,0,0.198762407366705,1.72046919021225,1.04142150482278,1.13061588384802,2.09749718104953,0.550236083880135,0.208994966536811,2.58416759169329,3.20189636418039,3.3472061276467,2.01414658554573,1.52054421143703,2.68468263302986,0.735326160691737,2.43042584364528,0.625098097988558,0.898117490504679,1.0135033243499,0,0,0.183201743930407,0,3.87780264148325,1.3082821564276,2.98183171017191,3.79891534993739,8.07696002960635,20.078563452417,8.51204117276057,7.28880880184999,22.417289103238,3.45334567784024,0.622422070799533,1.34710672069688,0.980771418680752,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,8.62341770179486,0,0,0,0.438977620880838,2.75839016219118,1.35214253015937,8.84771028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27437,0|short_description=p5@DHRS3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9249 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17693 | |||
|TSSclassifier=S | |||
|UniProt=O75911 | |||
|association_with_transcript=29bp_to_ENST00000376223_5end | |||
|description=CAGE_peak_5_at_DHRS3_5end | |||
|id=chr1:12677676..12677707,- | |||
|ontology_enrichment_celltype=CL:0000359!4.20e-09!32;CL:0000192!6.60e-08!42;CL:0000514!6.60e-08!42;CL:0000187!2.20e-07!54;CL:0000183!6.26e-07!59;CL:0000222!7.05e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.43e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.72e-09,32;CL:0000192,1.12e-07,43;CL:0000514,1.12e-07,43;CL:0000187,3.89e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.03e-12!118;UBERON:0000490!2.62e-11!138;UBERON:0002100!1.56e-10!216;UBERON:0004111!9.55e-10!241;UBERON:0003929!5.62e-09!54;UBERON:0000477!6.79e-09!286;UBERON:0001637!8.39e-09!42;UBERON:0003509!8.39e-09!42;UBERON:0004572!8.39e-09!42;UBERON:0005256!9.88e-09!143;UBERON:0004921!1.39e-08!129;UBERON:0004185!1.39e-08!129;UBERON:0004573!1.43e-08!33;UBERON:0004571!1.43e-08!33;UBERON:0003104!1.47e-08!238;UBERON:0009142!1.47e-08!238;UBERON:0000481!4.62e-08!347;UBERON:0000466!9.43e-08!126;UBERON:0000025!1.00e-07!194;UBERON:0005911!1.15e-07!82;UBERON:0002385!2.85e-07!63;UBERON:0001015!2.85e-07!63;UBERON:0000383!2.85e-07!63;UBERON:0001007!3.96e-07!155;UBERON:0001555!3.96e-07!155;UBERON:0007026!3.96e-07!155;UBERON:0001134!8.55e-07!61;UBERON:0002036!8.55e-07!61;UBERON:0003082!8.55e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.97e-08;33!UBERON:0004571;7.97e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.84e-13,199;UBERON:0003914,2.96e-12,117;UBERON:0005256,5.34e-12,122;UBERON:0003104,8.64e-10,160;UBERON:0009142,8.64e-10,160;UBERON:0003929,4.99e-09,54;UBERON:0001637,8.63e-09,42;UBERON:0003509,8.63e-09,42;UBERON:0004572,8.63e-09,42;UBERON:0004573,1.09e-08,33;UBERON:0004571,1.09e-08,33;UBERON:0004111,2.43e-08,240;UBERON:0000490,7.87e-08,148;UBERON:0005911,1.31e-07,82;UBERON:0004921,2.58e-07,118;UBERON:0002385,9.73e-07,64;UBERON:0001015,9.73e-07,64;UBERON:0000383,9.73e-07,64 | |||
|phase1_expression=3.63356758541113,4.92431204949261,19.59266216934,7.00513088471913,17.4314826826642,30.5318483435129,7.59899634504932,0.631719873426831,4.70134130759709,9.82935746006035,17.4450291993107,0,0,0.74259811776028,1.98838425436749,4.70627602516243,6.02694528023977,4.38186054232424,5.85519358548608,9.84968464614303,12.4440421658994,18.1803738457291,3.43483184557268,1.64249310087461,1.12988375635323,0.61130724598361,1.14940825229924,0.472264687882075,7.86728553697808,4.98978217526377,3.8704030829019,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,5.53995408531877,3.60980005446255,6.72733699219141,10.0761963407966,16.518576966968,12.6212028140751,0,0,1.4555043671269,1.39457422143411,0,0.929119112685311,2.01384674625505,0,0.945928919554341,0.689491361473237,0,0,1.12945403725563,0.818718450173537,0.449446968890169,1.83650335422542,0.962787081228281,0,0.659702600373432,0.598390972864896,0.852449501065388,1.45104619314292,0.56738522469114,0,0.75374599577023,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,3.96513985737078,3.36305137788922,1.31692042387539,8.65522988500866,14.1483874589699,8.01845846098086,0.501559486172034,10.4295125322749,6.15482147455153,1.94826728407911,2.67385096524417,0.883817722424512,0.886135578334485,0.270803863765016,1.5370958367081,2.86130564631732,20.0614243616485,11.3303507292198,14.4901542867526,9.49034004237187,10.7016331235885,11.4989076185474,2.03956816855619,4.59864592322305,3.77990190030893,6.07247260846807,6.68987370080603,11.7195021694155,4.75226022224187,2.25862678616659,3.19966527886046,4.99722906209383,7.57687206540854,8.21127996921047,7.25784275609037,7.75576567772171,14.9169135999283,9.75227465255847,22.13312837022,23.2709862555225,2.89151321907653,4.01070328508712,3.47631645505977,0,4.37971383272372,6.90104165297695,9.53436409089025,12.9117134968895,4.58426764241994,1.45718115317017,1.11235332835329,0.97364218096405,1.0447784237956,3.19099105245276,0.238490624305342,0,0,0.198762407366705,1.72046919021225,1.04142150482278,1.13061588384802,2.09749718104953,0.550236083880135,0.208994966536811,2.58416759169329,3.20189636418039,3.3472061276467,2.01414658554573,1.52054421143703,2.68468263302986,0.735326160691737,2.43042584364528,0.625098097988558,0.898117490504679,1.0135033243499,0,0,0.183201743930407,0,3.87780264148325,1.3082821564276,2.98183171017191,3.79891534993739,8.07696002960635,20.078563452417,8.51204117276057,7.28880880184999,22.417289103238,3.45334567784024,0.622422070799533,1.34710672069688,0.980771418680752,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,8.62341770179486,0,0,0,0.438977620880838,2.75839016219118,1.35214253015937,8.84771028648164,2.51145489964407,5.12537733164562,2.54318281391474,1.80054657650641,2.37020817248409,8.24449728146013,2.60563598864226,3.54430297706659,3.11798416515836,4.29137416214995,4.32634523618807,2.7479829659198,1.06502877754984,0.403008392910561,0.67824236924195,1.54608682530637,0,1.72082757233402,0.975789649036763,0.530119073285941,1.39432731443422,0.932949495138334,0,0,4.69348596989448,0.643240938192885,0,7.42988684851167,5.0531563716871,1.53798840051797,1.51726221070292,0.482022059766964,0.772057809126758,0.871517776369625,0.71181185733329,2.42696354688296,0.98110732562673,0.769494313892781,2.21446636387394,2.80483547606892,6.5851841813024,4.41026134156626,53.237114625169,48.1585336172037,54.9434613213706,0,5.53447973444011,12.5244501517924,0.109750285408626,0,0.703702806881416,0.0925884451585296,0,0,10.1031939417691,1.73895607462615,34.7529734938032,2.30986316417718,0.925971025153221,1.52203321787679,0.790204397959275,0,5.17055712783534,1.40402559083543,1.0404181360211,0,0.16798212819886,0.425325291727159,0.716468181622786,1.16253575405585,2.30029607499127,0.492663237895943,0.528290604079356,0,0,0,0,0.763976851116555,0,5.13217338068116,0.102827492703324,0,0,0,17.8743628221645,0.07333828582095,15.6418776066911,3.57656445851882,0,5.58470044828228,3.12022310734098,1.02882949704857,0,0,5.29018576535146,2.17048642156577,0.823240336780769,0.325736184293735,2.13235169245527,1.58390374586686,15.3734082300389,13.0730018790044,13.996218765488,9.72990245129524,11.0496560115068,4.21667878966063,0,0,0,0.289562613335158,0.821905290201534,0.716243852959582,0.448340575974109,8.86638420908672,14.0157923658686,23.6151186754737,0,0,0,0.837581326671744,0,0,0,0,1.59498939234882,4.50153468953709,0.271265023699736,17.261581507057,2.67643483195743,10.7237642223076,2.10854546986884,0.601892199455438,0,3.10419213877515,0,0,0.173767228936166,0,0,2.06768026122887,7.76571122947021,6.72383614161699,0.303127571446259,0,0.907170879989041,2.48107807818777,1.99500565274481,1.40330047216537,16.273671955474,11.2575594794675,4.3430558708774,13.3576259800492,0,2.84098760501003,1.72467027628999,1.03850885836724,1.39452454151951,2.05461064305758,12.2308946885004,12.9834194399614,19.9777139806416,6.9194643842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| |||
|short_description=p5@DHRS3 | |||
}} |
Revision as of 23:55, 11 September 2013
Short description: | p5@DHRS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_DHRS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000376223_5end |
EntrezGene: | DHRS3 |
HGNC: | 17693 |
UniProt: | O75911 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.72e-09 | 32 |
smooth muscle cell | 1.12e-07 | 43 |
smooth muscle myoblast | 1.12e-07 | 43 |
muscle cell | 3.89e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
trunk | 7.84e-13 | 199 |
epithelial tube | 2.96e-12 | 117 |
trunk mesenchyme | 5.34e-12 | 122 |
mesenchyme | 8.64e-10 | 160 |
entire embryonic mesenchyme | 8.64e-10 | 160 |
gut epithelium | 4.99e-09 | 54 |
artery | 8.63e-09 | 42 |
arterial blood vessel | 8.63e-09 | 42 |
arterial system | 8.63e-09 | 42 |
systemic artery | 1.09e-08 | 33 |
systemic arterial system | 1.09e-08 | 33 |
anatomical conduit | 2.43e-08 | 240 |
unilaminar epithelium | 7.87e-08 | 148 |
endo-epithelium | 1.31e-07 | 82 |
subdivision of digestive tract | 2.58e-07 | 118 |
muscle tissue | 9.73e-07 | 64 |
musculature | 9.73e-07 | 64 |
musculature of body | 9.73e-07 | 64 |
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