FFCP PHASE1:Hg19::chr1:119869755..119869768,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=157bp_to_ENST00000457719_5end|coexpression_cluster_id=C86|description=CAGE_peak_2_at_ENST00000457719_5end|id=chr1:119869755..119869768,-|ontology_enrichment_celltype=CL:0002322!2.27e-21!5|ontology_enrichment_celltype_v019=CL:0002253;3.11e-21;2!CL:0000322;1.83e-14;3!CL:0000784;1.83e-14;3!CL:0002563;2.53e-11;4|ontology_enrichment_celltype_v019_2=CL:0002253,3.11e-21,2;CL:0000784,1.83e-14,3;CL:0000322,2.09e-14,3;CL:0002563,2.53e-11,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050619!2.89e-08!1;DOID:1357!2.89e-08!1|ontology_enrichment_disease_v019=DOID:0050619;9.91e-41;1!DOID:1357;9.91e-41;1!DOID:3910;5.69e-21;2!DOID:0050615;6.14e-11;16!DOID:3908;3.22e-09;5!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7|ontology_enrichment_disease_v019_2=DOID:0050619,9.91e-41,1;DOID:1357,9.91e-41,1;DOID:3910,6.96e-21,2;DOID:0050615,6.45e-11,16;DOID:3908,3.49e-09,5;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7|ontology_enrichment_uberon=UBERON:0000200!5.34e-10!6;UBERON:0001869!1.40e-08!32;UBERON:0001764!2.89e-08!1;UBERON:0001825!2.89e-08!1;UBERON:0001893!4.83e-08!34;UBERON:0001871!6.05e-08!7;UBERON:0001301!6.52e-08!1;UBERON:0003112!6.97e-08!1;UBERON:0000032!6.97e-08!1;UBERON:0005253!6.97e-08!1;UBERON:0003128!6.97e-08!1;UBERON:0002241!6.97e-08!1;UBERON:0001703!6.97e-08!1;UBERON:0004761!6.97e-08!1;UBERON:0009617!6.97e-08!1;UBERON:0007190!1.54e-07!1;UBERON:0002581!1.64e-07!1;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0001950!1.91e-07!20;UBERON:0002619!8.87e-07!22|ontology_enrichment_uberon_v019=UBERON:0001764;9.91e-41;1!UBERON:0001825;9.91e-41;1!UBERON:0004903;5.69e-21;2!UBERON:0002173;5.69e-21;2!UBERON:0002186;5.69e-21;2!UBERON:0004821;1.83e-14;3!UBERON:0007499;1.83e-14;3!UBERON:0003215;1.83e-14;3!UBERON:0010368;1.83e-14;3!UBERON:0009911;1.83e-14;3!UBERON:0002299;1.83e-14;3!UBERON:0006524;1.83e-14;3!UBERON:0008874;1.83e-14;3!UBERON:0002169;1.83e-14;3!UBERON:0004894;1.83e-14;3!UBERON:0001052;2.53e-11;4!UBERON:0001242;2.53e-11;4!UBERON:0001262;2.53e-11;4!UBERON:0004786;2.53e-11;4!UBERON:0004808;2.53e-11;4!UBERON:0001277;2.53e-11;4!UBERON:0009856;3.42e-11;4!UBERON:0004907;2.53e-09;5!UBERON:0000485;5.08e-07;7!UBERON:0003929;5.08e-07;7!UBERON:0001871;6.04e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001764,9.91e-41,1;UBERON:0001825,9.91e-41,1;UBERON:0004903,6.96e-21,2;UBERON:0002173,6.96e-21,2;UBERON:0002186,6.96e-21,2;UBERON:0004821,2.09e-14,3;UBERON:0003215,2.09e-14,3;UBERON:0010368,2.09e-14,3;UBERON:0009911,2.09e-14,3;UBERON:0002299,2.09e-14,3;UBERON:0006524,2.09e-14,3;UBERON:0008874,2.09e-14,3;UBERON:0002169,2.09e-14,3;UBERON:0004894,2.09e-14,3;UBERON:0001052,2.53e-11,4;UBERON:0001242,2.53e-11,4;UBERON:0001262,2.53e-11,4;UBERON:0004786,2.53e-11,4;UBERON:0004808,2.53e-11,4;UBERON:0001277,2.53e-11,4;UBERON:0004907,2.53e-09,5;UBERON:0001871,5.70e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.8743916253233,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.26961417541674,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9680556575089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.065772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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=157bp_to_ENST00000457719_5end | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_2_at_ENST00000457719_5end | |||
|id=chr1:119869755..119869768,- | |||
|ontology_enrichment_celltype=CL:0002322!2.27e-21!5 | |||
|ontology_enrichment_celltype_v019=CL:0002253;3.11e-21;2!CL:0000322;1.83e-14;3!CL:0000784;1.83e-14;3!CL:0002563;2.53e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.11e-21,2;CL:0000784,1.83e-14,3;CL:0000322,2.09e-14,3;CL:0002563,2.53e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!2.89e-08!1;DOID:1357!2.89e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0050619;9.91e-41;1!DOID:1357;9.91e-41;1!DOID:3910;5.69e-21;2!DOID:0050615;6.14e-11;16!DOID:3908;3.22e-09;5!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.91e-41,1;DOID:1357,9.91e-41,1;DOID:3910,6.96e-21,2;DOID:0050615,6.45e-11,16;DOID:3908,3.49e-09,5;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000200!5.34e-10!6;UBERON:0001869!1.40e-08!32;UBERON:0001764!2.89e-08!1;UBERON:0001825!2.89e-08!1;UBERON:0001893!4.83e-08!34;UBERON:0001871!6.05e-08!7;UBERON:0001301!6.52e-08!1;UBERON:0003112!6.97e-08!1;UBERON:0000032!6.97e-08!1;UBERON:0005253!6.97e-08!1;UBERON:0003128!6.97e-08!1;UBERON:0002241!6.97e-08!1;UBERON:0001703!6.97e-08!1;UBERON:0004761!6.97e-08!1;UBERON:0009617!6.97e-08!1;UBERON:0007190!1.54e-07!1;UBERON:0002581!1.64e-07!1;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0001950!1.91e-07!20;UBERON:0002619!8.87e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;9.91e-41;1!UBERON:0001825;9.91e-41;1!UBERON:0004903;5.69e-21;2!UBERON:0002173;5.69e-21;2!UBERON:0002186;5.69e-21;2!UBERON:0004821;1.83e-14;3!UBERON:0007499;1.83e-14;3!UBERON:0003215;1.83e-14;3!UBERON:0010368;1.83e-14;3!UBERON:0009911;1.83e-14;3!UBERON:0002299;1.83e-14;3!UBERON:0006524;1.83e-14;3!UBERON:0008874;1.83e-14;3!UBERON:0002169;1.83e-14;3!UBERON:0004894;1.83e-14;3!UBERON:0001052;2.53e-11;4!UBERON:0001242;2.53e-11;4!UBERON:0001262;2.53e-11;4!UBERON:0004786;2.53e-11;4!UBERON:0004808;2.53e-11;4!UBERON:0001277;2.53e-11;4!UBERON:0009856;3.42e-11;4!UBERON:0004907;2.53e-09;5!UBERON:0000485;5.08e-07;7!UBERON:0003929;5.08e-07;7!UBERON:0001871;6.04e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,9.91e-41,1;UBERON:0001825,9.91e-41,1;UBERON:0004903,6.96e-21,2;UBERON:0002173,6.96e-21,2;UBERON:0002186,6.96e-21,2;UBERON:0004821,2.09e-14,3;UBERON:0003215,2.09e-14,3;UBERON:0010368,2.09e-14,3;UBERON:0009911,2.09e-14,3;UBERON:0002299,2.09e-14,3;UBERON:0006524,2.09e-14,3;UBERON:0008874,2.09e-14,3;UBERON:0002169,2.09e-14,3;UBERON:0004894,2.09e-14,3;UBERON:0001052,2.53e-11,4;UBERON:0001242,2.53e-11,4;UBERON:0001262,2.53e-11,4;UBERON:0004786,2.53e-11,4;UBERON:0004808,2.53e-11,4;UBERON:0001277,2.53e-11,4;UBERON:0004907,2.53e-09,5;UBERON:0001871,5.70e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.8743916253233,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.26961417541674,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9680556575089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000457719 | |||
}} |
Revision as of 23:49, 11 September 2013
Short description: | p2@ENST00000457719 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000457719_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 157bp_to_ENST00000457719_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.11e-21 | 2 |
plasmacytoid dendritic cell | 1.83e-14 | 3 |
pneumocyte | 2.09e-14 | 3 |
intestinal epithelial cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 9.91e-41 | 1 |
paranasal sinus | 9.91e-41 | 1 |
bronchoalveolar duct junction | 6.96e-21 | 2 |
alveolar duct | 6.96e-21 | 2 |
bronchiole | 6.96e-21 | 2 |
pulmonary alveolus epithelium | 2.09e-14 | 3 |
alveolus | 2.09e-14 | 3 |
pulmonary lobule | 2.09e-14 | 3 |
lobule | 2.09e-14 | 3 |
alveolus of lung | 2.09e-14 | 3 |
alveolar system | 2.09e-14 | 3 |
pulmonary acinus | 2.09e-14 | 3 |
alveolar sac | 2.09e-14 | 3 |
alveolar wall | 2.09e-14 | 3 |
rectum | 2.53e-11 | 4 |
intestinal mucosa | 2.53e-11 | 4 |
wall of intestine | 2.53e-11 | 4 |
gastrointestinal system mucosa | 2.53e-11 | 4 |
gastrointestinal system epithelium | 2.53e-11 | 4 |
intestinal epithelium | 2.53e-11 | 4 |
lower digestive tract | 2.53e-09 | 5 |
temporal lobe | 5.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.91e-41 | 1 |
maxillary sinus cancer | 9.91e-41 | 1 |
lung adenocarcinoma | 6.96e-21 | 2 |
respiratory system cancer | 6.45e-11 | 16 |
non-small cell lung carcinoma | 3.49e-09 | 5 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.