FFCP PHASE1:Hg19::chr1:103474065..103474069,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1301|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2186|TSSclassifier=N|UniProt=|association_with_transcript=-16bp_to_ENST00000461720_5end|coexpression_cluster_id=C926|description=CAGE_peak_8_at_COL11A1_5end|id=chr1:103474065..103474069,-|ontology_enrichment_celltype=CL:0000055!1.03e-15!180;CL:0002334!3.15e-12!12;CL:0002580!9.34e-09!3;CL:0002615!1.01e-08!3;CL:0000057!1.21e-08!75;CL:0000325!1.67e-08!39;CL:0002579!3.43e-08!3;CL:0000188!9.28e-08!9;CL:0000064!3.05e-07!3;CL:0005012!3.05e-07!3;CL:0000067!3.05e-07!3;CL:0002304!3.05e-07!3|ontology_enrichment_celltype_v019=CL:0002580;5.15e-23;3!CL:0002559;3.15e-14;5!CL:0002617;8.32e-10;2!CL:0002561;1.27e-09;2!CL:0002549;1.78e-09;2!CL:0000135;5.97e-07;3!CL:0000388;5.97e-07;3!CL:0002615;6.69e-07;3!CL:0000346;7.92e-07;3!CL:1000428;7.92e-07;3|ontology_enrichment_celltype_v019_2=CL:0002580,5.15e-23,3;CL:0002559,3.15e-14,5;CL:0002617,7.98e-10,2;CL:0002561,1.22e-09,2;CL:0002549,1.86e-09,2;CL:0000135,6.14e-07,3;CL:0000388,6.14e-07,3;CL:0002615,6.88e-07,3;CL:0000346,8.15e-07,3;CL:1000428,8.15e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!3.18e-15!6;UBERON:0002358!3.18e-15!6;UBERON:0003684!3.18e-15!6;UBERON:0001178!3.18e-15!6;UBERON:0002200!2.42e-12!11;UBERON:0006876!2.42e-12!11;UBERON:0007625!1.77e-11!11;UBERON:0004457!2.87e-09!12;UBERON:0000042!2.87e-09!12;UBERON:0000488!5.21e-09!4;UBERON:0005284!3.55e-08!5;UBERON:0001778!3.05e-07!3;UBERON:0001775!3.05e-07!3;UBERON:0000475!9.83e-07!365|ontology_enrichment_uberon_v019=UBERON:0000310;1.20e-15;10!UBERON:0001443;2.75e-14;11!UBERON:0002073;3.15e-14;5!UBERON:0005933;1.27e-09;2!UBERON:0005942;1.27e-09;2!UBERON:0005932;1.27e-09;2!UBERON:0005629;1.78e-09;2!UBERON:0005358;1.78e-09;2!UBERON:0001886;1.78e-09;2!UBERON:0004086;1.78e-09;2!UBERON:0005282;1.78e-09;2!UBERON:0005281;1.78e-09;2!UBERON:0007846;5.97e-07;3!UBERON:0000043;5.97e-07;3!UBERON:0007845;5.97e-07;3!UBERON:0000412;7.92e-07;3!UBERON:0001992;7.92e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.17e-15,10;UBERON:0001443,2.69e-14,11;UBERON:0002073,3.15e-14,5;UBERON:0005086,3.15e-14,5;UBERON:0005933,1.22e-09,2;UBERON:0005942,1.22e-09,2;UBERON:0005932,1.22e-09,2;UBERON:0005629,1.86e-09,2;UBERON:0005358,1.86e-09,2;UBERON:0001886,1.86e-09,2;UBERON:0004086,1.86e-09,2;UBERON:0005282,1.86e-09,2;UBERON:0005281,1.86e-09,2;UBERON:0007846,6.14e-07,3;UBERON:0000043,6.14e-07,3;UBERON:0007845,6.14e-07,3;UBERON:0000412,8.15e-07,3;UBERON:0001992,8.15e-07,3|phase1_expression=0.54503513781167,4.92431204949261,0.986680828671798,3.00219895059391,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,3.40644409211845,0.0945348171640679,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0.605429710579726,1.15235184896,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.89694817844431,0.427114777637135,0,0,0,0.515281080091258,0,0,0,0,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0.232387885739037,0,0,0,0,2.57296375277154,0,2.78620756819187,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0.285826432630578,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0.315404830067869,0.117141414992713,1.20378439891088,0,0,0.664225598535437,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,2.30192959932094,2.80660094433074,0.384417447767103,0.511707249066704,0.965123526861645,0,0,0.177561725313127,0,0.519254429183621,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81600920916704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929931402945002,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,0,0.432626562123789,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p8@COL11A1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1301 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2186 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_ENST00000461720_5end | |||
|coexpression_cluster_id=C926 | |||
|description=CAGE_peak_8_at_COL11A1_5end | |||
|id=chr1:103474065..103474069,- | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-15!180;CL:0002334!3.15e-12!12;CL:0002580!9.34e-09!3;CL:0002615!1.01e-08!3;CL:0000057!1.21e-08!75;CL:0000325!1.67e-08!39;CL:0002579!3.43e-08!3;CL:0000188!9.28e-08!9;CL:0000064!3.05e-07!3;CL:0005012!3.05e-07!3;CL:0000067!3.05e-07!3;CL:0002304!3.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002580;5.15e-23;3!CL:0002559;3.15e-14;5!CL:0002617;8.32e-10;2!CL:0002561;1.27e-09;2!CL:0002549;1.78e-09;2!CL:0000135;5.97e-07;3!CL:0000388;5.97e-07;3!CL:0002615;6.69e-07;3!CL:0000346;7.92e-07;3!CL:1000428;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,5.15e-23,3;CL:0002559,3.15e-14,5;CL:0002617,7.98e-10,2;CL:0002561,1.22e-09,2;CL:0002549,1.86e-09,2;CL:0000135,6.14e-07,3;CL:0000388,6.14e-07,3;CL:0002615,6.88e-07,3;CL:0000346,8.15e-07,3;CL:1000428,8.15e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!3.18e-15!6;UBERON:0002358!3.18e-15!6;UBERON:0003684!3.18e-15!6;UBERON:0001178!3.18e-15!6;UBERON:0002200!2.42e-12!11;UBERON:0006876!2.42e-12!11;UBERON:0007625!1.77e-11!11;UBERON:0004457!2.87e-09!12;UBERON:0000042!2.87e-09!12;UBERON:0000488!5.21e-09!4;UBERON:0005284!3.55e-08!5;UBERON:0001778!3.05e-07!3;UBERON:0001775!3.05e-07!3;UBERON:0000475!9.83e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.20e-15;10!UBERON:0001443;2.75e-14;11!UBERON:0002073;3.15e-14;5!UBERON:0005933;1.27e-09;2!UBERON:0005942;1.27e-09;2!UBERON:0005932;1.27e-09;2!UBERON:0005629;1.78e-09;2!UBERON:0005358;1.78e-09;2!UBERON:0001886;1.78e-09;2!UBERON:0004086;1.78e-09;2!UBERON:0005282;1.78e-09;2!UBERON:0005281;1.78e-09;2!UBERON:0007846;5.97e-07;3!UBERON:0000043;5.97e-07;3!UBERON:0007845;5.97e-07;3!UBERON:0000412;7.92e-07;3!UBERON:0001992;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.17e-15,10;UBERON:0001443,2.69e-14,11;UBERON:0002073,3.15e-14,5;UBERON:0005086,3.15e-14,5;UBERON:0005933,1.22e-09,2;UBERON:0005942,1.22e-09,2;UBERON:0005932,1.22e-09,2;UBERON:0005629,1.86e-09,2;UBERON:0005358,1.86e-09,2;UBERON:0001886,1.86e-09,2;UBERON:0004086,1.86e-09,2;UBERON:0005282,1.86e-09,2;UBERON:0005281,1.86e-09,2;UBERON:0007846,6.14e-07,3;UBERON:0000043,6.14e-07,3;UBERON:0007845,6.14e-07,3;UBERON:0000412,8.15e-07,3;UBERON:0001992,8.15e-07,3 | |||
|phase1_expression=0.54503513781167,4.92431204949261,0.986680828671798,3.00219895059391,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,3.40644409211845,0.0945348171640679,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0.605429710579726,1.15235184896,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.89694817844431,0.427114777637135,0,0,0,0.515281080091258,0,0,0,0,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0.232387885739037,0,0,0,0,2.57296375277154,0,2.78620756819187,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0.285826432630578,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0.315404830067869,0.117141414992713,1.20378439891088,0,0,0.664225598535437,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,2.30192959932094,2.80660094433074,0.384417447767103,0.511707249066704,0.965123526861645,0,0,0.177561725313127,0,0.519254429183621,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81600920916704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929931402945002,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,0,0.432626562123789,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@COL11A1 | |||
}} |
Revision as of 23:12, 11 September 2013
Short description: | p8@COL11A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_COL11A1_5end |
Coexpression cluster: | C926_Chondrocyte_Adipocyte_tenocyte_Wilms_Preadipocyte_Hair_Fibroblast |
Association with transcript: | -16bp_to_ENST00000461720_5end |
EntrezGene: | COL11A1 |
HGNC: | 2186 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 5.15e-23 | 3 |
hair follicle cell | 3.15e-14 | 5 |
adipocyte of breast | 7.98e-10 | 2 |
outer root sheath cell | 1.22e-09 | 2 |
fibroblast of choroid plexus | 1.86e-09 | 2 |
fibrocyte | 6.14e-07 | 3 |
tendon cell | 6.14e-07 | 3 |
adipocyte of omentum tissue | 6.88e-07 | 3 |
hair follicle dermal papilla cell | 8.15e-07 | 3 |
stem cell of epidermis | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 1.17e-15 | 10 |
chest | 2.69e-14 | 11 |
hair follicle | 3.15e-14 | 5 |
hair follicle placode | 3.15e-14 | 5 |
hair root sheath | 1.22e-09 | 2 |
hair outer root sheath | 1.22e-09 | 2 |
bulb of hair follicle | 1.22e-09 | 2 |
vascular plexus | 1.86e-09 | 2 |
ventricle of nervous system | 1.86e-09 | 2 |
choroid plexus | 1.86e-09 | 2 |
brain ventricle | 1.86e-09 | 2 |
ventricular system of brain | 1.86e-09 | 2 |
ventricular system of central nervous system | 1.86e-09 | 2 |
dense regular connective tissue | 6.14e-07 | 3 |
tendon | 6.14e-07 | 3 |
regular connective tissue | 6.14e-07 | 3 |
dermal papilla | 8.15e-07 | 3 |
papillary layer of dermis | 8.15e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.