FFCP PHASE1:Hg19::chr19:6697693..6697714,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=718|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1318|TSSclassifier=S|UniProt=|association_with_transcript=11bp_to_ENST00000482703_5end|coexpression_cluster_id=C5|description=CAGE_peak_21_at_C3_5end|id=chr19:6697693..6697714,-|ontology_enrichment_celltype=CL:0000181!7.43e-09!12;CL:0000417!7.43e-09!12;CL:0000668!7.43e-09!12;CL:0000414!7.43e-09!12;CL:0000412!7.43e-09!12;CL:0000182!7.43e-09!12|ontology_enrichment_celltype_v019=CL:0000182;3.43e-16;12|ontology_enrichment_celltype_v019_2=CL:0000182,4.09e-16,12|ontology_enrichment_development_v019=UBERON:0010227;6.42e-13;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4468;2.91e-07;2|ontology_enrichment_disease_v019_2=DOID:4468,2.91e-07,2|ontology_enrichment_uberon=UBERON:0007023!1.44e-15!115;UBERON:0009854!2.00e-08!23;UBERON:0002365!8.48e-08!31;UBERON:0002330!8.48e-08!31;UBERON:0002107!8.56e-08!19;UBERON:0006925!8.56e-08!19;UBERON:0008836!8.56e-08!19;UBERON:0000477!1.50e-07!286;UBERON:0008835!1.62e-07!22;UBERON:0003894!1.62e-07!22;UBERON:0000025!1.67e-07!194;UBERON:0000483!2.02e-07!309;UBERON:0009497!2.12e-07!25;UBERON:0000015!2.12e-07!25;UBERON:0002423!2.12e-07!25;UBERON:0006235!2.12e-07!25;UBERON:0004161!2.12e-07!25;UBERON:0004111!2.15e-07!241;UBERON:0002530!3.27e-07!59;UBERON:0000119!3.41e-07!312;UBERON:0007100!3.54e-07!27;UBERON:0003929!3.65e-07!54;UBERON:0009856!4.33e-07!26;UBERON:0000948!4.45e-07!24;UBERON:0005498!4.45e-07!24;UBERON:0004140!4.45e-07!24;UBERON:0009881!4.45e-07!24;UBERON:0004141!4.45e-07!24;UBERON:0003084!4.45e-07!24;UBERON:0007005!4.45e-07!24;UBERON:0004139!4.45e-07!24;UBERON:0004291!4.45e-07!24;UBERON:0005057!6.07e-07!26|ontology_enrichment_uberon_v019=UBERON:0002107;1.09e-15;19!UBERON:0006925;1.09e-15;19!UBERON:0002079;6.42e-13;1!UBERON:0001282;6.42e-13;1!UBERON:0009842;6.42e-13;1!UBERON:0003704;6.42e-13;1!UBERON:0001171;6.42e-13;1!UBERON:0001172;6.42e-13;1!UBERON:0002423;6.55e-12;25!UBERON:0002365;1.38e-09;31!UBERON:0002330;1.38e-09;31!UBERON:0002368;5.23e-08;33!UBERON:0006562;4.29e-07;2!UBERON:0002081;4.29e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.26e-15,19;UBERON:0006925,1.26e-15,19;UBERON:0008836,1.26e-15,19;UBERON:0008835,1.72e-13,22;UBERON:0003894,1.72e-13,22;UBERON:0002079,4.77e-13,1;UBERON:0009854,6.67e-13,23;UBERON:0001282,1.09e-12,1;UBERON:0009842,1.09e-12,1;UBERON:0003704,1.09e-12,1;UBERON:0001171,1.09e-12,1;UBERON:0001172,1.09e-12,1;UBERON:0007499,7.27e-12,25;UBERON:0009497,7.27e-12,25;UBERON:0000015,7.27e-12,25;UBERON:0002423,7.27e-12,25;UBERON:0006235,7.27e-12,25;UBERON:0004161,7.27e-12,25;UBERON:0009856,2.09e-11,26;UBERON:0002365,1.50e-09,31;UBERON:0002330,1.50e-09,31;UBERON:0002368,1.90e-08,35;UBERON:0002081,3.70e-07,2;UBERON:0010227,3.70e-07,2|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,29.1536580090211,18.6737171168749,4.72631925345123,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,2.19940580600526,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0.2023155617111,0,0,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,1.31717957183961,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,1.02547850262301,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,2.28525931422807,0,0,0,0.265372693510018,0,0,0,0,0.606610196826093,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=718 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=11bp_to_ENST00000482703_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_21_at_C3_5end | |||
|id=chr19:6697693..6697714,- | |||
|ontology_enrichment_celltype=CL:0000181!7.43e-09!12;CL:0000417!7.43e-09!12;CL:0000668!7.43e-09!12;CL:0000414!7.43e-09!12;CL:0000412!7.43e-09!12;CL:0000182!7.43e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.43e-16;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.09e-16,12 | |||
|ontology_enrichment_development_v019=UBERON:0010227;6.42e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;2.91e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.91e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-15!115;UBERON:0009854!2.00e-08!23;UBERON:0002365!8.48e-08!31;UBERON:0002330!8.48e-08!31;UBERON:0002107!8.56e-08!19;UBERON:0006925!8.56e-08!19;UBERON:0008836!8.56e-08!19;UBERON:0000477!1.50e-07!286;UBERON:0008835!1.62e-07!22;UBERON:0003894!1.62e-07!22;UBERON:0000025!1.67e-07!194;UBERON:0000483!2.02e-07!309;UBERON:0009497!2.12e-07!25;UBERON:0000015!2.12e-07!25;UBERON:0002423!2.12e-07!25;UBERON:0006235!2.12e-07!25;UBERON:0004161!2.12e-07!25;UBERON:0004111!2.15e-07!241;UBERON:0002530!3.27e-07!59;UBERON:0000119!3.41e-07!312;UBERON:0007100!3.54e-07!27;UBERON:0003929!3.65e-07!54;UBERON:0009856!4.33e-07!26;UBERON:0000948!4.45e-07!24;UBERON:0005498!4.45e-07!24;UBERON:0004140!4.45e-07!24;UBERON:0009881!4.45e-07!24;UBERON:0004141!4.45e-07!24;UBERON:0003084!4.45e-07!24;UBERON:0007005!4.45e-07!24;UBERON:0004139!4.45e-07!24;UBERON:0004291!4.45e-07!24;UBERON:0005057!6.07e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.09e-15;19!UBERON:0006925;1.09e-15;19!UBERON:0002079;6.42e-13;1!UBERON:0001282;6.42e-13;1!UBERON:0009842;6.42e-13;1!UBERON:0003704;6.42e-13;1!UBERON:0001171;6.42e-13;1!UBERON:0001172;6.42e-13;1!UBERON:0002423;6.55e-12;25!UBERON:0002365;1.38e-09;31!UBERON:0002330;1.38e-09;31!UBERON:0002368;5.23e-08;33!UBERON:0006562;4.29e-07;2!UBERON:0002081;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.26e-15,19;UBERON:0006925,1.26e-15,19;UBERON:0008836,1.26e-15,19;UBERON:0008835,1.72e-13,22;UBERON:0003894,1.72e-13,22;UBERON:0002079,4.77e-13,1;UBERON:0009854,6.67e-13,23;UBERON:0001282,1.09e-12,1;UBERON:0009842,1.09e-12,1;UBERON:0003704,1.09e-12,1;UBERON:0001171,1.09e-12,1;UBERON:0001172,1.09e-12,1;UBERON:0007499,7.27e-12,25;UBERON:0009497,7.27e-12,25;UBERON:0000015,7.27e-12,25;UBERON:0002423,7.27e-12,25;UBERON:0006235,7.27e-12,25;UBERON:0004161,7.27e-12,25;UBERON:0009856,2.09e-11,26;UBERON:0002365,1.50e-09,31;UBERON:0002330,1.50e-09,31;UBERON:0002368,1.90e-08,35;UBERON:0002081,3.70e-07,2;UBERON:0010227,3.70e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,29.1536580090211,18.6737171168749,4.72631925345123,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,2.19940580600526,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0.2023155617111,0,0,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,1.31717957183961,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,1.02547850262301,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,2.28525931422807,0,0,0,0.265372693510018,0,0,0,0,0.606610196826093,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0.193978032976839,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0.945398187686684,0.741742725430498,0.741438982396034,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,7.62071615126029,0,0,0.52893040697076,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0.450772826991655,1.52322084867518,0,0,0.966695013382396,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0,1.23520578864389,0.877136198314828,0,0,0.337884881306145,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,1.14986184875636,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0.458729283404541,0.573358332605805,0,0,0,1.0580536810308,1.11598505450025,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0,0,0.103432995861895,0.213233981900981,0,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0,0,0.244209805832924,0.426909383510862,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p21@C3 | |||
}} |
Revision as of 22:49, 11 September 2013
Short description: | p21@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 11bp_to_ENST00000482703_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.09e-16 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.26e-15 | 19 |
digestive gland | 1.26e-15 | 19 |
liver bud | 1.26e-15 | 19 |
hepatic diverticulum | 1.72e-13 | 22 |
liver primordium | 1.72e-13 | 22 |
left cardiac atrium | 4.77e-13 | 1 |
digestive tract diverticulum | 6.67e-13 | 23 |
intralobular bile duct | 1.09e-12 | 1 |
acinus | 1.09e-12 | 1 |
intrahepatic bile duct | 1.09e-12 | 1 |
portal lobule | 1.09e-12 | 1 |
hepatic acinus | 1.09e-12 | 1 |
epithelial sac | 7.27e-12 | 25 |
epithelium of foregut-midgut junction | 7.27e-12 | 25 |
anatomical boundary | 7.27e-12 | 25 |
hepatobiliary system | 7.27e-12 | 25 |
foregut-midgut junction | 7.27e-12 | 25 |
septum transversum | 7.27e-12 | 25 |
sac | 2.09e-11 | 26 |
exocrine gland | 1.50e-09 | 31 |
exocrine system | 1.50e-09 | 31 |
endocrine gland | 1.90e-08 | 35 |
cardiac atrium | 3.70e-07 | 2 |
future cardiac atrium | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.91e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.