FFCP PHASE1:Hg19::chr19:54761080..54761146,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10990|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6609|TSSclassifier=S|UniProt=C9JMK7,Q8NF80|association_with_transcript=0bp_to_ENST00000345866,ENST00000450632,ENST00000463460,uc002qfa.1_5end|coexpression_cluster_id=C67|description=CAGE_peak_1_at_LILRB5_5end|id=chr19:54761080..54761146,-|ontology_enrichment_celltype=CL:0000839!1.57e-07!70;CL:0000557!2.58e-07!71;CL:0002194!2.67e-07!63;CL:0000576!2.67e-07!63;CL:0000040!2.67e-07!63;CL:0000559!2.67e-07!63;CL:0002009!7.40e-07!65;CL:0000766!7.80e-07!76|ontology_enrichment_celltype_v019=CL:0000235;1.95e-11;6!CL:0002619;5.17e-07;3|ontology_enrichment_celltype_v019_2=CL:0000235,2.08e-11,6;CL:0002619,5.18e-07,3|ontology_enrichment_development_v019=UBERON:0004872;3.44e-09;7!UBERON:0006603;9.27e-08;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.47e-76!115;UBERON:0001049!1.27e-26!57;UBERON:0005068!1.27e-26!57;UBERON:0006241!1.27e-26!57;UBERON:0007135!1.27e-26!57;UBERON:0003080!1.41e-21!42;UBERON:0002616!3.46e-21!59;UBERON:0002780!1.91e-20!41;UBERON:0001890!1.91e-20!41;UBERON:0006240!1.91e-20!41;UBERON:0003075!1.91e-20!86;UBERON:0007284!1.91e-20!86;UBERON:0001017!4.81e-19!82;UBERON:0002346!7.61e-19!90;UBERON:0005743!1.33e-18!86;UBERON:0000062!2.96e-18!511;UBERON:0000955!4.42e-18!69;UBERON:0006238!4.42e-18!69;UBERON:0002020!5.35e-17!34;UBERON:0003528!5.35e-17!34;UBERON:0001893!6.08e-17!34;UBERON:0000073!2.37e-16!94;UBERON:0001016!2.37e-16!94;UBERON:0002791!2.91e-16!33;UBERON:0001869!1.89e-15!32;UBERON:0003056!1.23e-13!61;UBERON:0002619!7.62e-13!22;UBERON:0000153!6.48e-12!129;UBERON:0007811!6.48e-12!129;UBERON:0000468!6.63e-12!659;UBERON:0000467!8.04e-12!625;UBERON:0000480!9.85e-12!626;UBERON:0001950!2.08e-11!20;UBERON:0000956!9.95e-11!25;UBERON:0000203!9.95e-11!25;UBERON:0000922!1.07e-10!612;UBERON:0002050!2.97e-10!605;UBERON:0005423!2.97e-10!605;UBERON:0000033!2.98e-10!123;UBERON:0000923!7.93e-10!604;UBERON:0005291!7.93e-10!604;UBERON:0006598!7.93e-10!604;UBERON:0002532!7.93e-10!604;UBERON:0004121!4.32e-09!169;UBERON:0000924!1.55e-08!173;UBERON:0006601!1.55e-08!173;UBERON:0002308!3.18e-08!9;UBERON:0000125!3.18e-08!9;UBERON:0002298!3.92e-08!8;UBERON:0000025!1.64e-07!194;UBERON:0004111!1.96e-07!241;UBERON:0000479!2.30e-07!787;UBERON:0000477!6.13e-07!286;UBERON:0002405!6.16e-07!115|ontology_enrichment_uberon_v019=UBERON:0007023;1.32e-17;114!UBERON:0000922;8.45e-09;49|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.70e-62,114;UBERON:0011216,8.43e-11,223;UBERON:0001049,1.36e-08,56;UBERON:0005068,1.36e-08,56;UBERON:0006241,1.36e-08,56;UBERON:0007135,1.36e-08,56;UBERON:0000073,2.11e-08,53;UBERON:0002616,2.11e-08,53;UBERON:0003075,1.66e-07,82;UBERON:0007284,1.66e-07,82;UBERON:0000922,2.39e-07,592;UBERON:0002050,3.36e-07,564;UBERON:0005409,3.43e-07,25;UBERON:0002780,3.73e-07,41;UBERON:0001890,3.73e-07,41;UBERON:0003080,3.73e-07,41;UBERON:0006240,3.73e-07,41;UBERON:0005423,4.44e-07,581;UBERON:0000923,5.47e-07,560;UBERON:0010316,5.47e-07,560;UBERON:0005291,5.47e-07,560;UBERON:0006598,5.47e-07,560;UBERON:0010317,5.47e-07,560;UBERON:0002532,5.47e-07,560;UBERON:0002346,7.42e-07,86|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,2.82114131930607,338.112366102286,223.486629553096,342.575504953468,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.580418477257168,0,0,0,0,0,1.21079900526674,0,0,0.211255286311942,5.10250319916104,0,0,5.25619124945272,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,4.12584087817795,0,0,0,0,5.58423434179234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,20.6393715502301,30.721075147433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,114.49090783064,3.04205544681009,34.0365361641188,0,0,0,0,0,0,0,0,0.207328115540772,1.15295962733569,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.7845610308286,106.980760475043,46.383466686267,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0625871548286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2994791592397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6609 | |||
|TSSclassifier=S | |||
|UniProt=C9JMK7,Q8NF80 | |||
|association_with_transcript=0bp_to_ENST00000345866,ENST00000450632,ENST00000463460,uc002qfa.1_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_LILRB5_5end | |||
|id=chr19:54761080..54761146,- | |||
|ontology_enrichment_celltype=CL:0000839!1.57e-07!70;CL:0000557!2.58e-07!71;CL:0002194!2.67e-07!63;CL:0000576!2.67e-07!63;CL:0000040!2.67e-07!63;CL:0000559!2.67e-07!63;CL:0002009!7.40e-07!65;CL:0000766!7.80e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.95e-11;6!CL:0002619;5.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.08e-11,6;CL:0002619,5.18e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.44e-09;7!UBERON:0006603;9.27e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-76!115;UBERON:0001049!1.27e-26!57;UBERON:0005068!1.27e-26!57;UBERON:0006241!1.27e-26!57;UBERON:0007135!1.27e-26!57;UBERON:0003080!1.41e-21!42;UBERON:0002616!3.46e-21!59;UBERON:0002780!1.91e-20!41;UBERON:0001890!1.91e-20!41;UBERON:0006240!1.91e-20!41;UBERON:0003075!1.91e-20!86;UBERON:0007284!1.91e-20!86;UBERON:0001017!4.81e-19!82;UBERON:0002346!7.61e-19!90;UBERON:0005743!1.33e-18!86;UBERON:0000062!2.96e-18!511;UBERON:0000955!4.42e-18!69;UBERON:0006238!4.42e-18!69;UBERON:0002020!5.35e-17!34;UBERON:0003528!5.35e-17!34;UBERON:0001893!6.08e-17!34;UBERON:0000073!2.37e-16!94;UBERON:0001016!2.37e-16!94;UBERON:0002791!2.91e-16!33;UBERON:0001869!1.89e-15!32;UBERON:0003056!1.23e-13!61;UBERON:0002619!7.62e-13!22;UBERON:0000153!6.48e-12!129;UBERON:0007811!6.48e-12!129;UBERON:0000468!6.63e-12!659;UBERON:0000467!8.04e-12!625;UBERON:0000480!9.85e-12!626;UBERON:0001950!2.08e-11!20;UBERON:0000956!9.95e-11!25;UBERON:0000203!9.95e-11!25;UBERON:0000922!1.07e-10!612;UBERON:0002050!2.97e-10!605;UBERON:0005423!2.97e-10!605;UBERON:0000033!2.98e-10!123;UBERON:0000923!7.93e-10!604;UBERON:0005291!7.93e-10!604;UBERON:0006598!7.93e-10!604;UBERON:0002532!7.93e-10!604;UBERON:0004121!4.32e-09!169;UBERON:0000924!1.55e-08!173;UBERON:0006601!1.55e-08!173;UBERON:0002308!3.18e-08!9;UBERON:0000125!3.18e-08!9;UBERON:0002298!3.92e-08!8;UBERON:0000025!1.64e-07!194;UBERON:0004111!1.96e-07!241;UBERON:0000479!2.30e-07!787;UBERON:0000477!6.13e-07!286;UBERON:0002405!6.16e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.32e-17;114!UBERON:0000922;8.45e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.70e-62,114;UBERON:0011216,8.43e-11,223;UBERON:0001049,1.36e-08,56;UBERON:0005068,1.36e-08,56;UBERON:0006241,1.36e-08,56;UBERON:0007135,1.36e-08,56;UBERON:0000073,2.11e-08,53;UBERON:0002616,2.11e-08,53;UBERON:0003075,1.66e-07,82;UBERON:0007284,1.66e-07,82;UBERON:0000922,2.39e-07,592;UBERON:0002050,3.36e-07,564;UBERON:0005409,3.43e-07,25;UBERON:0002780,3.73e-07,41;UBERON:0001890,3.73e-07,41;UBERON:0003080,3.73e-07,41;UBERON:0006240,3.73e-07,41;UBERON:0005423,4.44e-07,581;UBERON:0000923,5.47e-07,560;UBERON:0010316,5.47e-07,560;UBERON:0005291,5.47e-07,560;UBERON:0006598,5.47e-07,560;UBERON:0010317,5.47e-07,560;UBERON:0002532,5.47e-07,560;UBERON:0002346,7.42e-07,86 | |||
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|short_description=p1@LILRB5 | |||
}} |
Revision as of 22:19, 11 September 2013
Short description: | p1@LILRB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LILRB5_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000345866, ENST00000450632, ENST00000463460, uc002qfa.1_5end |
EntrezGene: | LILRB5 |
HGNC: | 6609 |
UniProt: | C9JMK7Q8NF80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.08e-11 | 6 |
adult endothelial progenitor cell | 5.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.70e-62 | 114 |
organ system subdivision | 8.43e-11 | 223 |
neural tube | 1.36e-08 | 56 |
neural rod | 1.36e-08 | 56 |
future spinal cord | 1.36e-08 | 56 |
neural keel | 1.36e-08 | 56 |
regional part of nervous system | 2.11e-08 | 53 |
regional part of brain | 2.11e-08 | 53 |
neural plate | 1.66e-07 | 82 |
presumptive neural plate | 1.66e-07 | 82 |
embryo | 2.39e-07 | 592 |
embryonic structure | 3.36e-07 | 564 |
gastrointestinal system | 3.43e-07 | 25 |
regional part of forebrain | 3.73e-07 | 41 |
forebrain | 3.73e-07 | 41 |
anterior neural tube | 3.73e-07 | 41 |
future forebrain | 3.73e-07 | 41 |
developing anatomical structure | 4.44e-07 | 581 |
germ layer | 5.47e-07 | 560 |
germ layer / neural crest | 5.47e-07 | 560 |
embryonic tissue | 5.47e-07 | 560 |
presumptive structure | 5.47e-07 | 560 |
germ layer / neural crest derived structure | 5.47e-07 | 560 |
epiblast (generic) | 5.47e-07 | 560 |
neurectoderm | 7.42e-07 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.