FFCP PHASE1:Hg19::chr19:52264235..52264246,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2358|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3827|TSSclassifier=S|UniProt=P25090|association_with_transcript=52bp_to_ENST00000340023_5end|coexpression_cluster_id=C641|description=CAGE_peak_6_at_FPR2_5end|id=chr19:52264235..52264246,+|ontology_enrichment_celltype=CL:0002057!1.70e-103!42;CL:0000860!6.47e-96!45;CL:0002194!1.87e-75!63;CL:0000576!1.87e-75!63;CL:0000040!1.87e-75!63;CL:0000559!1.87e-75!63;CL:0002009!7.66e-73!65;CL:0000766!1.51e-71!76;CL:0000839!5.89e-67!70;CL:0000557!7.07e-66!71;CL:0000763!1.79e-47!112;CL:0000049!1.79e-47!112;CL:0002087!2.14e-43!119;CL:0000738!2.01e-41!140;CL:0002031!3.33e-39!124;CL:0002032!1.89e-33!165;CL:0000837!1.89e-33!165;CL:0000037!3.45e-33!172;CL:0000566!3.45e-33!172;CL:0000988!1.01e-30!182;CL:0002393!1.64e-16!9;CL:0002397!1.64e-16!9;CL:0000875!1.15e-10!3;CL:0002396!1.15e-10!3;CL:0000134!1.21e-10!358;CL:0002320!3.22e-10!365;CL:0000219!9.99e-09!390;CL:0000048!5.82e-07!430|ontology_enrichment_celltype_v019=CL:0000860;5.73e-76;33!CL:0002057;5.73e-76;33!CL:0000576;7.62e-56;48!CL:0000473;1.28e-52;39!CL:0000234;1.28e-52;39!CL:0000766;3.91e-33;69!CL:0000763;1.20e-18;100!CL:0000875;2.51e-17;3!CL:0002396;2.51e-17;3!CL:0002087;1.78e-13;104!CL:0000738;6.01e-11;136!CL:0000775;1.60e-08;3!CL:0000094;5.92e-07;8|ontology_enrichment_celltype_v019_2=CL:0000860,3.58e-99,42;CL:0002057,3.58e-99,42;CL:0000473,4.33e-86,48;CL:0000234,4.33e-86,48;CL:0000766,3.99e-68,72;CL:0002194,9.13e-68,59;CL:0000576,9.13e-68,59;CL:0000040,9.13e-68,59;CL:0000559,9.13e-68,59;CL:0002009,2.12e-65,61;CL:0000839,4.18e-60,66;CL:0000557,3.87e-59,67;CL:0000763,1.10e-43,108;CL:0000049,1.10e-43,108;CL:0000738,1.54e-33,136;CL:0002087,2.45e-32,115;CL:0002031,9.12e-31,120;CL:0002032,1.95e-27,161;CL:0000837,1.95e-27,161;CL:0000037,4.73e-26,168;CL:0000988,1.99e-24,177;CL:0000875,2.67e-17,3;CL:0002396,2.67e-17,3;CL:0002393,4.74e-15,9;CL:0002397,4.74e-15,9;CL:0000134,3.50e-09,354;CL:0002320,6.96e-09,361;CL:0000775,1.73e-08,3;CL:0000219,7.81e-08,386;CL:0000094,6.18e-07,8|ontology_enrichment_development_v019=CL:0002057;1.16e-71;42!CL:0000049;1.90e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.36e-70!102;UBERON:0003061!5.36e-70!102;UBERON:0002193!1.01e-62!112;UBERON:0002371!2.30e-57!80;UBERON:0001474!1.14e-52!86;UBERON:0004765!2.37e-43!101;UBERON:0001434!2.37e-43!101;UBERON:0002405!3.16e-43!115;UBERON:0003081!8.47e-27!216;UBERON:0002204!1.72e-23!167;UBERON:0000178!3.04e-12!15;UBERON:0000179!3.04e-12!15;UBERON:0000463!3.04e-12!15;UBERON:0002384!2.62e-10!375;UBERON:0000926!9.58e-10!448;UBERON:0004120!9.58e-10!448;UBERON:0006603!9.58e-10!448|ontology_enrichment_uberon_v019=UBERON:0000178;4.93e-09;15!UBERON:0000179;4.93e-09;15!UBERON:0000463;4.93e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.51e-55,98;UBERON:0003061,1.51e-55,98;UBERON:0002371,1.42e-51,76;UBERON:0002193,6.68e-50,108;UBERON:0001474,1.93e-47,82;UBERON:0004765,8.94e-43,90;UBERON:0002405,3.14e-41,93;UBERON:0001434,5.56e-38,100;UBERON:0003081,8.12e-24,203;UBERON:0002204,1.46e-20,167;UBERON:0000926,3.79e-13,315;UBERON:0004120,3.79e-13,315;UBERON:0006603,3.79e-13,315;UBERON:0000178,5.40e-09,15;UBERON:0000179,5.40e-09,15;UBERON:0000463,5.40e-09,15;UBERON:0002384,1.77e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,3.63495596948912,0.755751887377619,1.21292030593908,3.48643555358527,0,1.85823822537062,3.74000110018796,1.0246428261164,0.709446689665756,1.72372840368309,0.645484683583826,0,4.1413314699373,1.91034305040492,2.9214052977861,8.87643287875617,1.92557416245656,1.91801137739712,5.27762080298746,2.79249120670285,0.852449501065388,6.38460324982885,1.13477044938228,1.86846674698672,1.7587406567972,1.0429658368404,1.08594422352558,4.23779651843358,0.736555271975129,1.58231193720442,1.05627643155971,0.637812899895131,1.46761051855863,0.112328631146495,0.600707571366025,0.32145117339416,1.71007646244749,1.39241674039363,2.00930569141097,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3827 | |||
|TSSclassifier=S | |||
|UniProt=P25090 | |||
|association_with_transcript=52bp_to_ENST00000340023_5end | |||
|coexpression_cluster_id=C641 | |||
|description=CAGE_peak_6_at_FPR2_5end | |||
|id=chr19:52264235..52264246,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.70e-103!42;CL:0000860!6.47e-96!45;CL:0002194!1.87e-75!63;CL:0000576!1.87e-75!63;CL:0000040!1.87e-75!63;CL:0000559!1.87e-75!63;CL:0002009!7.66e-73!65;CL:0000766!1.51e-71!76;CL:0000839!5.89e-67!70;CL:0000557!7.07e-66!71;CL:0000763!1.79e-47!112;CL:0000049!1.79e-47!112;CL:0002087!2.14e-43!119;CL:0000738!2.01e-41!140;CL:0002031!3.33e-39!124;CL:0002032!1.89e-33!165;CL:0000837!1.89e-33!165;CL:0000037!3.45e-33!172;CL:0000566!3.45e-33!172;CL:0000988!1.01e-30!182;CL:0002393!1.64e-16!9;CL:0002397!1.64e-16!9;CL:0000875!1.15e-10!3;CL:0002396!1.15e-10!3;CL:0000134!1.21e-10!358;CL:0002320!3.22e-10!365;CL:0000219!9.99e-09!390;CL:0000048!5.82e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.73e-76;33!CL:0002057;5.73e-76;33!CL:0000576;7.62e-56;48!CL:0000473;1.28e-52;39!CL:0000234;1.28e-52;39!CL:0000766;3.91e-33;69!CL:0000763;1.20e-18;100!CL:0000875;2.51e-17;3!CL:0002396;2.51e-17;3!CL:0002087;1.78e-13;104!CL:0000738;6.01e-11;136!CL:0000775;1.60e-08;3!CL:0000094;5.92e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.58e-99,42;CL:0002057,3.58e-99,42;CL:0000473,4.33e-86,48;CL:0000234,4.33e-86,48;CL:0000766,3.99e-68,72;CL:0002194,9.13e-68,59;CL:0000576,9.13e-68,59;CL:0000040,9.13e-68,59;CL:0000559,9.13e-68,59;CL:0002009,2.12e-65,61;CL:0000839,4.18e-60,66;CL:0000557,3.87e-59,67;CL:0000763,1.10e-43,108;CL:0000049,1.10e-43,108;CL:0000738,1.54e-33,136;CL:0002087,2.45e-32,115;CL:0002031,9.12e-31,120;CL:0002032,1.95e-27,161;CL:0000837,1.95e-27,161;CL:0000037,4.73e-26,168;CL:0000988,1.99e-24,177;CL:0000875,2.67e-17,3;CL:0002396,2.67e-17,3;CL:0002393,4.74e-15,9;CL:0002397,4.74e-15,9;CL:0000134,3.50e-09,354;CL:0002320,6.96e-09,361;CL:0000775,1.73e-08,3;CL:0000219,7.81e-08,386;CL:0000094,6.18e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-71;42!CL:0000049;1.90e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.36e-70!102;UBERON:0003061!5.36e-70!102;UBERON:0002193!1.01e-62!112;UBERON:0002371!2.30e-57!80;UBERON:0001474!1.14e-52!86;UBERON:0004765!2.37e-43!101;UBERON:0001434!2.37e-43!101;UBERON:0002405!3.16e-43!115;UBERON:0003081!8.47e-27!216;UBERON:0002204!1.72e-23!167;UBERON:0000178!3.04e-12!15;UBERON:0000179!3.04e-12!15;UBERON:0000463!3.04e-12!15;UBERON:0002384!2.62e-10!375;UBERON:0000926!9.58e-10!448;UBERON:0004120!9.58e-10!448;UBERON:0006603!9.58e-10!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.93e-09;15!UBERON:0000179;4.93e-09;15!UBERON:0000463;4.93e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.51e-55,98;UBERON:0003061,1.51e-55,98;UBERON:0002371,1.42e-51,76;UBERON:0002193,6.68e-50,108;UBERON:0001474,1.93e-47,82;UBERON:0004765,8.94e-43,90;UBERON:0002405,3.14e-41,93;UBERON:0001434,5.56e-38,100;UBERON:0003081,8.12e-24,203;UBERON:0002204,1.46e-20,167;UBERON:0000926,3.79e-13,315;UBERON:0004120,3.79e-13,315;UBERON:0006603,3.79e-13,315;UBERON:0000178,5.40e-09,15;UBERON:0000179,5.40e-09,15;UBERON:0000463,5.40e-09,15;UBERON:0002384,1.77e-08,371 | |||
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|short_description=p6@FPR2 | |||
}} |
Revision as of 22:07, 11 September 2013
Short description: | p6@FPR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_FPR2_5end |
Coexpression cluster: | C641_CD14_Neutrophils_Peripheral_Basophils_Whole_Monocytederived_Eosinophils |
Association with transcript: | 52bp_to_ENST00000340023_5end |
EntrezGene: | FPR2 |
HGNC: | 3827 |
UniProt: | P25090 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.51e-55 | 98 |
blood island | 1.51e-55 | 98 |
bone marrow | 1.42e-51 | 76 |
hemolymphoid system | 6.68e-50 | 108 |
bone element | 1.93e-47 | 82 |
skeletal element | 8.94e-43 | 90 |
immune system | 3.14e-41 | 93 |
skeletal system | 5.56e-38 | 100 |
lateral plate mesoderm | 8.12e-24 | 203 |
musculoskeletal system | 1.46e-20 | 167 |
mesoderm | 3.79e-13 | 315 |
mesoderm-derived structure | 3.79e-13 | 315 |
presumptive mesoderm | 3.79e-13 | 315 |
blood | 5.40e-09 | 15 |
haemolymphatic fluid | 5.40e-09 | 15 |
organism substance | 5.40e-09 | 15 |
connective tissue | 1.77e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.