FFCP PHASE1:Hg19::chr19:49652811..49652835,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8541|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9247|TSSclassifier=S|UniProt=|association_with_transcript=-379bp_to_AK001525_5end|description=CAGE_peak_10_at_PPFIA3_5end|id=chr19:49652811..49652835,+|ontology_enrichment_celltype=CL:0000066!3.67e-20!254|ontology_enrichment_celltype_v019=CL:0002322;9.15e-13;5!CL:0000540;9.59e-07;6!CL:0000404;9.59e-07;6|ontology_enrichment_celltype_v019_2=CL:0002322,8.82e-13,5;CL:0000066,8.69e-07,253|ontology_enrichment_development_v019=CL:0000031;9.59e-07;6|ontology_enrichment_disease=DOID:0050687!1.41e-13!143;DOID:305!1.00e-10!106;DOID:162!9.35e-10!235;DOID:14566!2.40e-09!239|ontology_enrichment_disease_v019=DOID:5093;3.67e-09;4!DOID:1612;3.67e-09;4|ontology_enrichment_disease_v019_2=DOID:5093,3.21e-09,4;DOID:1612,3.21e-09,4|ontology_enrichment_uberon=UBERON:0005153!5.69e-08!37|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,1.05506791291381,0.247532705920093,0.331397375727916,0,1.20538905604795,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,2.71085326900425,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.196468613246569,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.151357427644931,0.576175924479999,0.468642863667593,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0.193260853163297,0.272746120590835,0,1.58565817968474,2.65059536642971,2.09149097165133,0.932949495138334,2.01856680700503,2.91981887260664,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0.768251997860379,1.1240175325762,0.201057944823262,0.462942225792648,0,0,0,0,0.352226082707465,0,0.925971025153221,0.190254152234598,3.95102198979638,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.358234090811393,0.871901815541886,1.15014803749563,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0.763976851116555,0,0,0.102827492703324,0.600686115687835,0.571652865261156,0.224262168690721,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.303127571446259,3.32870879020994,2.72151263996712,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,0.40101294060657,0.368323955743585,0,0,0.131124414959424,0,0.385076685522074,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,1.54227252690289,0,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0.0915694648183434,0.247528499761764,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0.145016693914229,0,0.356128142586949,0.495854746082934,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.429374660225974,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0,0.353437207037059,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.384888450902048,0,1.08890984861323,0.0941438007767792,0.43050537267123,1.68471475667626,2.66058092122005,0,0,0,0,0,0,0,0,0,1.70918513803957,0,0.980160863924127,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.748562161632879,0.146508179271894,1.57768678274367,0,1.13654458722565,0.23874448473769,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,1.05562704063997,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0.449341755736634,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,1.04171104434093,1.66173999992772,0,0.455173793141999,0.508507300585533,0.472775363535873,1.03423011972439,5.24888304089858,0.347249989866585,0.885741385813839,0,0,0.221158519862449,0.886642856860642,0.219385397153973,0.10893846351899,0.41827123283581,0.0769502585037971,0,0.23056390438806,0.179515288819544,0.217294743844016,0,0.0915975934018623,0,0,0.470940769185074,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8541 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9247 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-379bp_to_AK001525_5end | |||
|description=CAGE_peak_10_at_PPFIA3_5end | |||
|id=chr19:49652811..49652835,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.67e-20!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.15e-13;5!CL:0000540;9.59e-07;6!CL:0000404;9.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.82e-13,5;CL:0000066,8.69e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000031;9.59e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!1.41e-13!143;DOID:305!1.00e-10!106;DOID:162!9.35e-10!235;DOID:14566!2.40e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.67e-09;4!DOID:1612;3.67e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.21e-09,4;DOID:1612,3.21e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0005153!5.69e-08!37 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p10@PPFIA3 | |||
}} |
Revision as of 21:45, 11 September 2013
Short description: | p10@PPFIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_PPFIA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -379bp_to_AK001525_5end |
EntrezGene: | PPFIA3 |
HGNC: | 9247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.82e-13 | 5 |
epithelial cell | 8.69e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.21e-09 | 4 |
breast cancer | 3.21e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.