FFCP PHASE1:Hg19::chr19:45411839..45411852,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C848|description=CAGE_peak_at_chr19:45411839..45411852,+|id=chr19:45411839..45411852,+|ontology_enrichment_celltype=CL:0000039!3.62e-07!7;CL:0000586!3.62e-07!7;CL:0000136!4.10e-07!15|ontology_enrichment_celltype_v019=CL:0000235;2.03e-25;6!CL:0002619;1.15e-19;3!CL:0002575;7.95e-13;2!CL:0002521;4.40e-09;3!CL:0002231;5.18e-09;3!CL:0000669;7.71e-07;4|ontology_enrichment_celltype_v019_2=CL:0000235,1.89e-25,6;CL:0002619,1.23e-19,3;CL:0002575,1.01e-12,2;CL:0002521,3.67e-09,3;CL:0002231,5.08e-09,3;CL:0000669,8.69e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.90e-07!115|ontology_enrichment_uberon_v019=UBERON:0002190;4.40e-09;3!UBERON:0002107;5.05e-08;19!UBERON:0006925;5.05e-08;19!UBERON:0002171;3.00e-07;1!UBERON:0006518;3.00e-07;1!UBERON:0008949;3.00e-07;1!UBERON:0000101;3.00e-07;1!UBERON:0002167;3.00e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.67e-09,3;UBERON:0002107,4.73e-08,19;UBERON:0006925,4.73e-08,19;UBERON:0008836,4.73e-08,19;UBERON:0002171,3.62e-07,1;UBERON:0006518,3.62e-07,1;UBERON:0008949,3.62e-07,1;UBERON:0000101,3.62e-07,1;UBERON:0002167,3.62e-07,1;UBERON:0008835,6.45e-07,22;UBERON:0003894,6.45e-07,22|phase1_expression=0.181678379270557,3.42560838225573,0.140954404095971,0,0.893922188854576,0,0,1.89515962028049,3.3954131665979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.16529517567758,3.88672399222775,3.34848237924443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.756787138224657,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0.207322110030741,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,1.96565443335525,4.13552934676983,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.936017060556951,1.78357394746474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,1.62786481617433,0,0,0,0,0,0,0,9.72990245129524,1.00451418286425,4.21667878966063,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,1.17480694477644,1.37257369524342,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29632954224082,1.60405176242628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0.591095237907095,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0.217294743844016,0,0.274792780205587,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.315132729228895,0.412079291905832,0.26961417541674,0,0,0,0,0.321506296930038,0.825236619583403,0,0,0,0,0,0.86686278029118,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,6.15519381447946,1.32506888912221,0.517131825446202,0.13223260174269,0,0,0.533937062838473,0,1.24271716604159,0,0,0,0,0,0.2506898940227,0.306345576763462,0.983617892129413,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.606596470166591,0.570930667089935,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,1.02558182120378,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C848 | |||
|description=CAGE_peak_at_chr19:45411839..45411852,+ | |||
|id=chr19:45411839..45411852,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.62e-07!7;CL:0000586!3.62e-07!7;CL:0000136!4.10e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.03e-25;6!CL:0002619;1.15e-19;3!CL:0002575;7.95e-13;2!CL:0002521;4.40e-09;3!CL:0002231;5.18e-09;3!CL:0000669;7.71e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.89e-25,6;CL:0002619,1.23e-19,3;CL:0002575,1.01e-12,2;CL:0002521,3.67e-09,3;CL:0002231,5.08e-09,3;CL:0000669,8.69e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.90e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;4.40e-09;3!UBERON:0002107;5.05e-08;19!UBERON:0006925;5.05e-08;19!UBERON:0002171;3.00e-07;1!UBERON:0006518;3.00e-07;1!UBERON:0008949;3.00e-07;1!UBERON:0000101;3.00e-07;1!UBERON:0002167;3.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.67e-09,3;UBERON:0002107,4.73e-08,19;UBERON:0006925,4.73e-08,19;UBERON:0008836,4.73e-08,19;UBERON:0002171,3.62e-07,1;UBERON:0006518,3.62e-07,1;UBERON:0008949,3.62e-07,1;UBERON:0000101,3.62e-07,1;UBERON:0002167,3.62e-07,1;UBERON:0008835,6.45e-07,22;UBERON:0003894,6.45e-07,22 | |||
|phase1_expression=0.181678379270557,3.42560838225573,0.140954404095971,0,0.893922188854576,0,0,1.89515962028049,3.3954131665979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.16529517567758,3.88672399222775,3.34848237924443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.756787138224657,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0.207322110030741,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,1.96565443335525,4.13552934676983,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.936017060556951,1.78357394746474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,1.62786481617433,0,0,0,0,0,0,0,9.72990245129524,1.00451418286425,4.21667878966063,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,1.17480694477644,1.37257369524342,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29632954224082,1.60405176242628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0.591095237907095,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0.217294743844016,0,0.274792780205587,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.315132729228895,0.412079291905832,0.26961417541674,0,0,0,0,0.321506296930038,0.825236619583403,0,0,0,0,0,0.86686278029118,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,6.15519381447946,1.32506888912221,0.517131825446202,0.13223260174269,0,0,0.533937062838473,0,1.24271716604159,0,0,0,0,0,0.2506898940227,0.306345576763462,0.983617892129413,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.606596470166591,0.570930667089935,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,1.02558182120378,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0.588925401344836,0,0.8453114551668,0,0.0939839179798536,0.193373663920732,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0,0.917899467677836,0.26721740526556,0.36757959813938,0.50141507858475,0.530450887527676,0.267964130156178,0,0.103432995861895,0,0,0.129177819672012,0,0,0.0636471582781649,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr19:45411839..45411852,+ | |||
}} |
Revision as of 21:09, 11 September 2013
Short description: | p@chr19:45411839..45411852, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:45411839..45411852, + |
Coexpression cluster: | C848_Monocytederived_Mesenchymal_Hepatocyte_Adipocyte_CD14_Cardiac_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.89e-25 | 6 |
adult endothelial progenitor cell | 1.23e-19 | 3 |
central nervous system pericyte | 1.01e-12 | 2 |
subcutaneous fat cell | 3.67e-09 | 3 |
epithelial cell of prostate | 5.08e-09 | 3 |
pericyte cell | 8.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.67e-09 | 3 |
liver | 4.73e-08 | 19 |
digestive gland | 4.73e-08 | 19 |
liver bud | 4.73e-08 | 19 |
lower lobe of right lung | 3.62e-07 | 1 |
right lung lobe | 3.62e-07 | 1 |
lower lobe of lung | 3.62e-07 | 1 |
lobe of lung | 3.62e-07 | 1 |
right lung | 3.62e-07 | 1 |
hepatic diverticulum | 6.45e-07 | 22 |
liver primordium | 6.45e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.