FFCP PHASE1:Hg19::chr19:41859298..41859309,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7040 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11766 | |||
|TSSclassifier=S | |||
|UniProt=P01137 | |||
|association_with_transcript=8bp_to_BC022242_5end | |||
|coexpression_cluster_id=C1822 | |||
|description=CAGE_peak_4_at_TGFB1_5end | |||
|id=chr19:41859298..41859309,- | |||
|ontology_enrichment_celltype=CL:0002371!7.67e-27!591;CL:0000048!1.01e-25!430;CL:0000723!6.51e-25!436;CL:0000034!7.10e-23!444;CL:0002320!4.28e-22!365;CL:0000134!1.19e-21!358;CL:0000144!1.72e-21!625;CL:0002057!1.04e-19!42;CL:0000766!4.68e-19!76;CL:0000003!2.64e-17!722;CL:0000860!2.16e-16!45;CL:0000763!8.33e-16!112;CL:0000049!8.33e-16!112;CL:0000557!2.28e-15!71;CL:0000219!2.87e-15!390;CL:0000839!4.75e-15!70;CL:0002194!1.10e-14!63;CL:0000576!1.10e-14!63;CL:0000040!1.10e-14!63;CL:0000559!1.10e-14!63;CL:0002009!1.20e-14!65;CL:0000988!4.31e-13!182;CL:0000548!7.49e-13!679;CL:0000004!7.49e-13!679;CL:0000255!7.49e-13!679;CL:0002032!1.14e-12!165;CL:0000837!1.14e-12!165;CL:0000037!1.25e-12!172;CL:0000566!1.25e-12!172;CL:0000738!1.66e-12!140;CL:0000012!2.78e-12!682;CL:0000063!1.52e-11!578;CL:0002087!6.85e-11!119;CL:0002031!8.31e-11!124;CL:0000222!9.78e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.98e-19;33!CL:0002057;4.98e-19;33!CL:0000473;1.97e-16;39!CL:0000234;1.97e-16;39!CL:0000576;1.44e-12;48!CL:0000766;2.69e-11;69!CL:0000763;1.65e-07;100 | |||
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| |||
|short_description=p4@TGFB1 | |||
}} |
Revision as of 20:48, 11 September 2013
Short description: | p4@TGFB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TGFB1_5end |
Coexpression cluster: | C1822_CD14_CD8_Neutrophils_Natural_Renal_Endothelial_acute |
Association with transcript: | 8bp_to_BC022242_5end |
EntrezGene: | TGFB1 |
HGNC: | 11766 |
UniProt: | P01137 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.88e-26 | 427 |
somatic stem cell | 3.31e-25 | 433 |
stem cell | 3.70e-23 | 441 |
myeloid leukocyte | 1.24e-22 | 72 |
connective tissue cell | 2.03e-22 | 361 |
mesenchymal cell | 5.62e-22 | 354 |
defensive cell | 1.02e-20 | 48 |
phagocyte | 1.02e-20 | 48 |
classical monocyte | 7.67e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.67e-20 | 42 |
granulocyte monocyte progenitor cell | 1.05e-18 | 67 |
myeloid cell | 3.45e-18 | 108 |
common myeloid progenitor | 3.45e-18 | 108 |
myeloid lineage restricted progenitor cell | 3.74e-18 | 66 |
monopoietic cell | 4.53e-18 | 59 |
monocyte | 4.53e-18 | 59 |
monoblast | 4.53e-18 | 59 |
promonocyte | 4.53e-18 | 59 |
macrophage dendritic cell progenitor | 5.91e-18 | 61 |
motile cell | 1.29e-15 | 386 |
hematopoietic oligopotent progenitor cell | 6.78e-14 | 161 |
hematopoietic multipotent progenitor cell | 6.78e-14 | 161 |
hematopoietic cell | 6.85e-14 | 177 |
leukocyte | 7.55e-14 | 136 |
hematopoietic stem cell | 8.34e-14 | 168 |
nongranular leukocyte | 2.67e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 4.14e-12 | 120 |
mesodermal cell | 6.88e-07 | 121 |
endothelial cell | 6.89e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.38e-31 | 203 |
mesoderm | 1.26e-20 | 315 |
mesoderm-derived structure | 1.26e-20 | 315 |
presumptive mesoderm | 1.26e-20 | 315 |
connective tissue | 3.52e-20 | 371 |
hematopoietic system | 5.96e-19 | 98 |
blood island | 5.96e-19 | 98 |
hemolymphoid system | 1.07e-18 | 108 |
bone marrow | 7.28e-17 | 76 |
bone element | 1.39e-15 | 82 |
immune system | 2.57e-15 | 93 |
musculoskeletal system | 2.25e-14 | 167 |
skeletal element | 7.28e-14 | 90 |
cardiovascular system | 2.00e-13 | 109 |
circulatory system | 1.33e-12 | 112 |
skeletal system | 1.66e-12 | 100 |
epithelial tube open at both ends | 5.94e-10 | 59 |
blood vessel | 5.94e-10 | 59 |
blood vasculature | 5.94e-10 | 59 |
vascular cord | 5.94e-10 | 59 |
splanchnic layer of lateral plate mesoderm | 1.24e-09 | 83 |
vasculature | 1.42e-09 | 78 |
vascular system | 1.42e-09 | 78 |
artery | 1.79e-09 | 42 |
arterial blood vessel | 1.79e-09 | 42 |
arterial system | 1.79e-09 | 42 |
vessel | 2.04e-09 | 68 |
systemic artery | 8.53e-08 | 33 |
systemic arterial system | 8.53e-08 | 33 |
epithelial tube | 3.93e-07 | 117 |
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