FFCP PHASE1:Hg19::chr19:41304544..41304552,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C675|description=CAGE_peak_at_chr19:41304544..41304552,-|id=chr19:41304544..41304552,-|ontology_enrichment_celltype=CL:0000738!8.00e-59!140;CL:0000860!5.38e-55!45;CL:0002087!5.71e-55!119;CL:0002057!1.05e-51!42;CL:0002031!1.42e-49!124;CL:0000037!3.39e-49!172;CL:0000566!3.39e-49!172;CL:0002032!7.99e-46!165;CL:0000837!7.99e-46!165;CL:0000988!4.10e-45!182;CL:0000766!2.18e-44!76;CL:0000839!1.37e-36!70;CL:0002194!3.15e-36!63;CL:0000576!3.15e-36!63;CL:0000040!3.15e-36!63;CL:0000559!3.15e-36!63;CL:0000557!7.14e-36!71;CL:0002009!1.06e-34!65;CL:0000763!7.35e-29!112;CL:0000049!7.35e-29!112;CL:0000134!4.93e-16!358;CL:0002320!2.95e-15!365;CL:0000542!6.26e-15!53;CL:0000051!6.26e-15!53;CL:0000838!4.88e-14!52;CL:0000219!1.50e-12!390;CL:0000048!7.33e-11!430;CL:0000723!2.19e-10!436;CL:0000624!2.22e-10!6;CL:0000034!8.96e-10!444;CL:0000094!1.96e-07!8;CL:0000623!6.57e-07!3;CL:0000825!6.57e-07!3|ontology_enrichment_celltype_v019=CL:0000860;3.09e-69;33!CL:0002057;3.09e-69;33!CL:0000473;5.42e-48;39!CL:0000234;5.42e-48;39!CL:0000576;9.77e-37;48!CL:0000766;2.23e-24;69!CL:0002087;7.47e-19;104!CL:0000623;6.53e-15;3!CL:0000738;2.70e-12;136!CL:0000624;1.42e-11;6!CL:0000791;5.67e-11;18!CL:0000789;5.67e-11;18!CL:0002419;5.67e-11;18!CL:0000763;8.96e-11;100!CL:0000084;1.25e-07;25!CL:0000988;5.15e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,2.10e-68,42;CL:0002057,2.10e-68,42;CL:0000473,4.81e-59,48;CL:0000234,4.81e-59,48;CL:0002087,1.66e-51,115;CL:0000738,2.46e-47,136;CL:0002194,6.11e-46,59;CL:0000576,6.11e-46,59;CL:0000040,6.11e-46,59;CL:0000559,6.11e-46,59;CL:0002009,3.00e-44,61;CL:0002031,1.41e-43,120;CL:0000766,8.53e-43,72;CL:0000839,1.83e-40,66;CL:0000557,8.96e-40,67;CL:0000037,9.55e-37,168;CL:0000988,1.88e-34,177;CL:0002032,2.02e-34,161;CL:0000837,2.02e-34,161;CL:0000763,2.12e-26,108;CL:0000049,2.12e-26,108;CL:0000623,5.99e-15,3;CL:0000825,5.99e-15,3;CL:0000134,6.47e-13,354;CL:0002320,1.71e-12,361;CL:0000624,2.48e-11,6;CL:0000219,5.17e-11,386;CL:0000791,8.96e-11,18;CL:0000789,8.96e-11,18;CL:0002420,8.96e-11,18;CL:0002419,8.96e-11,18;CL:0000790,8.96e-11,18;CL:0000048,3.36e-09,427;CL:0000723,5.97e-09,433;CL:0000034,1.26e-08,441;CL:0000838,5.86e-08,52;CL:0000542,9.08e-08,53;CL:0000051,9.08e-08,53;CL:0000084,1.71e-07,25;CL:0000827,1.71e-07,25;CL:0000226,8.76e-07,3;CL:0000842,8.76e-07,3|ontology_enrichment_development_v019=CL:0002057;2.35e-51;42!CL:0000790;5.67e-11;18!CL:0000049;1.48e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.69e-32!80;UBERON:0002390!1.36e-31!102;UBERON:0003061!1.36e-31!102;UBERON:0001474!1.14e-28!86;UBERON:0002193!2.60e-27!112;UBERON:0002405!1.76e-25!115;UBERON:0004765!1.46e-23!101;UBERON:0001434!1.46e-23!101;UBERON:0002384!8.69e-15!375;UBERON:0002204!1.35e-09!167;UBERON:0003081!1.06e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.27e-34,76;UBERON:0002390,4.04e-32,98;UBERON:0003061,4.04e-32,98;UBERON:0001474,2.03e-31,82;UBERON:0002405,3.26e-29,93;UBERON:0002193,1.58e-28,108;UBERON:0004765,4.33e-28,90;UBERON:0001434,1.13e-24,100;UBERON:0002204,2.55e-12,167;UBERON:0003081,5.04e-12,203;UBERON:0002384,6.39e-12,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0.786728553697808,0.767658796194425,0.77408061658038,0,0,0,0,0.284338464974843,0.587200878669695,0.553995408531877,2.60707781711184,1.51907609501096,0,0,0,1.01778767145695,0.755751887377619,2.91100873425379,1.85943229524548,1.6446715520873,2.78735733805593,1.1507695692886,1.0246428261164,0.236482229888585,3.44745680736619,1.29096936716765,4.06279459783025,1.31769637679823,0.545812300115692,2.24723484445085,2.44867113896722,1.28371610830437,1.27867425159808,0.329851300186716,1.19678194572979,0.852449501065388,1.16083695451434,2.26954089876456,4.35975574296902,4.27122730936464,1.5644487552606,1.3031330682307,1.21079900526674,2.94622108790052,4.1140110367315,0.422510572623884,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,1.1384259382189,0.587237189370939,0,0,0,0,0.590129310341499,1.17903228824749,3.28962398399215,0,0.651844533267181,0,3.89653456815823,0,1.17842362989935,1.32920336750173,0,0,0,0,0,0,1.33457906845854,0,3.1360657141493,0,1.14966148080576,1.37450978193052,0.759059076058509,0,0,0,0,0,0,0,0,3.22570789159572,2.13952156626806,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C675 | |||
|description=CAGE_peak_at_chr19:41304544..41304552,- | |||
|id=chr19:41304544..41304552,- | |||
|ontology_enrichment_celltype=CL:0000738!8.00e-59!140;CL:0000860!5.38e-55!45;CL:0002087!5.71e-55!119;CL:0002057!1.05e-51!42;CL:0002031!1.42e-49!124;CL:0000037!3.39e-49!172;CL:0000566!3.39e-49!172;CL:0002032!7.99e-46!165;CL:0000837!7.99e-46!165;CL:0000988!4.10e-45!182;CL:0000766!2.18e-44!76;CL:0000839!1.37e-36!70;CL:0002194!3.15e-36!63;CL:0000576!3.15e-36!63;CL:0000040!3.15e-36!63;CL:0000559!3.15e-36!63;CL:0000557!7.14e-36!71;CL:0002009!1.06e-34!65;CL:0000763!7.35e-29!112;CL:0000049!7.35e-29!112;CL:0000134!4.93e-16!358;CL:0002320!2.95e-15!365;CL:0000542!6.26e-15!53;CL:0000051!6.26e-15!53;CL:0000838!4.88e-14!52;CL:0000219!1.50e-12!390;CL:0000048!7.33e-11!430;CL:0000723!2.19e-10!436;CL:0000624!2.22e-10!6;CL:0000034!8.96e-10!444;CL:0000094!1.96e-07!8;CL:0000623!6.57e-07!3;CL:0000825!6.57e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.09e-69;33!CL:0002057;3.09e-69;33!CL:0000473;5.42e-48;39!CL:0000234;5.42e-48;39!CL:0000576;9.77e-37;48!CL:0000766;2.23e-24;69!CL:0002087;7.47e-19;104!CL:0000623;6.53e-15;3!CL:0000738;2.70e-12;136!CL:0000624;1.42e-11;6!CL:0000791;5.67e-11;18!CL:0000789;5.67e-11;18!CL:0002419;5.67e-11;18!CL:0000763;8.96e-11;100!CL:0000084;1.25e-07;25!CL:0000988;5.15e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.10e-68,42;CL:0002057,2.10e-68,42;CL:0000473,4.81e-59,48;CL:0000234,4.81e-59,48;CL:0002087,1.66e-51,115;CL:0000738,2.46e-47,136;CL:0002194,6.11e-46,59;CL:0000576,6.11e-46,59;CL:0000040,6.11e-46,59;CL:0000559,6.11e-46,59;CL:0002009,3.00e-44,61;CL:0002031,1.41e-43,120;CL:0000766,8.53e-43,72;CL:0000839,1.83e-40,66;CL:0000557,8.96e-40,67;CL:0000037,9.55e-37,168;CL:0000988,1.88e-34,177;CL:0002032,2.02e-34,161;CL:0000837,2.02e-34,161;CL:0000763,2.12e-26,108;CL:0000049,2.12e-26,108;CL:0000623,5.99e-15,3;CL:0000825,5.99e-15,3;CL:0000134,6.47e-13,354;CL:0002320,1.71e-12,361;CL:0000624,2.48e-11,6;CL:0000219,5.17e-11,386;CL:0000791,8.96e-11,18;CL:0000789,8.96e-11,18;CL:0002420,8.96e-11,18;CL:0002419,8.96e-11,18;CL:0000790,8.96e-11,18;CL:0000048,3.36e-09,427;CL:0000723,5.97e-09,433;CL:0000034,1.26e-08,441;CL:0000838,5.86e-08,52;CL:0000542,9.08e-08,53;CL:0000051,9.08e-08,53;CL:0000084,1.71e-07,25;CL:0000827,1.71e-07,25;CL:0000226,8.76e-07,3;CL:0000842,8.76e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-51;42!CL:0000790;5.67e-11;18!CL:0000049;1.48e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.69e-32!80;UBERON:0002390!1.36e-31!102;UBERON:0003061!1.36e-31!102;UBERON:0001474!1.14e-28!86;UBERON:0002193!2.60e-27!112;UBERON:0002405!1.76e-25!115;UBERON:0004765!1.46e-23!101;UBERON:0001434!1.46e-23!101;UBERON:0002384!8.69e-15!375;UBERON:0002204!1.35e-09!167;UBERON:0003081!1.06e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.27e-34,76;UBERON:0002390,4.04e-32,98;UBERON:0003061,4.04e-32,98;UBERON:0001474,2.03e-31,82;UBERON:0002405,3.26e-29,93;UBERON:0002193,1.58e-28,108;UBERON:0004765,4.33e-28,90;UBERON:0001434,1.13e-24,100;UBERON:0002204,2.55e-12,167;UBERON:0003081,5.04e-12,203;UBERON:0002384,6.39e-12,371 | |||
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|short_description=p@chr19:41304544..41304552,- | |||
}} |
Revision as of 20:44, 11 September 2013
Short description: | p@chr19:41304544..41304552, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:41304544..41304552, - |
Coexpression cluster: | C675_Eosinophils_CD14_Natural_CD8_Neutrophils_Basophils_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.27e-34 | 76 |
hematopoietic system | 4.04e-32 | 98 |
blood island | 4.04e-32 | 98 |
bone element | 2.03e-31 | 82 |
immune system | 3.26e-29 | 93 |
hemolymphoid system | 1.58e-28 | 108 |
skeletal element | 4.33e-28 | 90 |
skeletal system | 1.13e-24 | 100 |
musculoskeletal system | 2.55e-12 | 167 |
lateral plate mesoderm | 5.04e-12 | 203 |
connective tissue | 6.39e-12 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.