FFCP PHASE1:Hg19::chr19:2476902..2476908,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4616|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=4096|TSSclassifier=S|UniProt=|association_with_transcript=42bp_to_AK129595_5end|coexpression_cluster_id=C12|description=CAGE_peak_36_at_GADD45B_5end|id=chr19:2476902..2476908,+|ontology_enrichment_celltype=CL:0002274!2.99e-07!5;CL:0000457!2.99e-07!5;CL:0002191!2.99e-07!5;CL:0000097!2.99e-07!5;CL:0000831!2.99e-07!5;CL:0002028!2.99e-07!5|ontology_enrichment_celltype_v019=CL:0000097;2.01e-40;5!CL:0000163;4.85e-23;9!CL:0000775;8.70e-18;3!CL:0002548;1.57e-09;6!CL:0000094;1.64e-07;8|ontology_enrichment_celltype_v019_2=CL:0000097,1.81e-40,5;CL:0002028,1.81e-40,5;CL:0000163,4.59e-23,9;CL:0000775,9.46e-18,3;CL:0002548,1.57e-09,6;CL:0000094,1.69e-07,8;CL:0000766,5.36e-07,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52457796419313,0.288239906833923,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,2.24702107184155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p36@GADD45B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4616 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4096 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=42bp_to_AK129595_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_36_at_GADD45B_5end | |||
|id=chr19:2476902..2476908,+ | |||
|ontology_enrichment_celltype=CL:0002274!2.99e-07!5;CL:0000457!2.99e-07!5;CL:0002191!2.99e-07!5;CL:0000097!2.99e-07!5;CL:0000831!2.99e-07!5;CL:0002028!2.99e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.01e-40;5!CL:0000163;4.85e-23;9!CL:0000775;8.70e-18;3!CL:0002548;1.57e-09;6!CL:0000094;1.64e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.81e-40,5;CL:0002028,1.81e-40,5;CL:0000163,4.59e-23,9;CL:0000775,9.46e-18,3;CL:0002548,1.57e-09,6;CL:0000094,1.69e-07,8;CL:0000766,5.36e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52457796419313,0.288239906833923,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,2.24702107184155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p36@GADD45B | |||
}} |
Revision as of 19:47, 11 September 2013
Short description: | p36@GADD45B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_36_at_GADD45B_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 42bp_to_AK129595_5end |
EntrezGene: | GADD45B |
HGNC: | 4096 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.81e-40 | 5 |
basophil mast progenitor cell | 1.81e-40 | 5 |
endocrine cell | 4.59e-23 | 9 |
neutrophil | 9.46e-18 | 3 |
cardiac fibroblast | 1.57e-09 | 6 |
granulocyte | 1.69e-07 | 8 |
myeloid leukocyte | 5.36e-07 | 72 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.