FFCP PHASE1:Hg19::chr18:64271475..64271484,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=28513|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1758|TSSclassifier=S|UniProt=Q96KY9|association_with_transcript=-66bp_to_ENST00000454642_5end|description=CAGE_peak_6_at_CDH19_5end|id=chr18:64271475..64271484,-|ontology_enrichment_celltype=CL:0000147!4.73e-07!14;CL:0002566!4.90e-07!1|ontology_enrichment_celltype_v019=CL:0000746;1.24e-09;3!CL:0000737;1.54e-07;4!CL:0002494;3.44e-07;16|ontology_enrichment_celltype_v019_2=CL:0000746,1.30e-09,3;CL:0000513,1.30e-09,3;CL:0000737,1.59e-07,4;CL:0002494,3.44e-07,16|ontology_enrichment_development_v019=UBERON:0005062;2.37e-56;4!UBERON:0007284;2.37e-56;4!UBERON:0004140;6.72e-26;1!CL:0000513;1.24e-09;3!UBERON:0003104;8.89e-08;31|ontology_enrichment_disease=DOID:114!1.51e-13!2;DOID:178!1.18e-07!1;DOID:326!1.18e-07!1;DOID:3978!1.18e-07!1;DOID:3394!1.18e-07!1;DOID:5844!1.18e-07!1;DOID:1287!3.41e-07!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!6.72e-22!27;UBERON:0003978!3.95e-20!3;UBERON:0009751!3.95e-20!3;UBERON:0000946!3.95e-20!3;UBERON:0002523!3.95e-20!3;UBERON:0005983!3.95e-20!3;UBERON:0002165!3.95e-20!3;UBERON:0002062!3.95e-20!3;UBERON:0007280!3.95e-20!3;UBERON:0007023!6.41e-17!115;UBERON:0002133!4.27e-14!2;UBERON:0000948!2.61e-12!24;UBERON:0005498!2.61e-12!24;UBERON:0004140!2.61e-12!24;UBERON:0009881!2.61e-12!24;UBERON:0004141!2.61e-12!24;UBERON:0003084!2.61e-12!24;UBERON:0007005!2.61e-12!24;UBERON:0004139!2.61e-12!24;UBERON:0004291!2.61e-12!24;UBERON:0003103!8.25e-11!69;UBERON:0004151!1.48e-09!3;UBERON:0002134!6.59e-08!1;UBERON:0005208!6.59e-08!1;UBERON:0005946!6.59e-08!1;UBERON:0005965!6.59e-08!1;UBERON:0002078!6.59e-08!1;UBERON:0002135!7.03e-08!1;UBERON:0002146!9.10e-08!1;UBERON:0005623!9.10e-08!1;UBERON:0002084!1.10e-07!1;UBERON:0002082!1.10e-07!1;UBERON:0004706!1.10e-07!1;UBERON:0000989!1.33e-07!1;UBERON:0008811!1.33e-07!1;UBERON:0006258!1.33e-07!1;UBERON:0005876!1.33e-07!1;UBERON:0004874!1.33e-07!1;UBERON:0002038!3.01e-07!1;UBERON:0009661!3.01e-07!1|ontology_enrichment_uberon_v019=UBERON:0003978;8.86e-75;3!UBERON:0000946;8.86e-75;3!UBERON:0002133;8.82e-51;2!UBERON:0007100;2.58e-48;25!UBERON:0000948;1.42e-40;22!UBERON:0002134;2.16e-26;1!UBERON:0005208;2.16e-26;1!UBERON:0004145;2.16e-26;1!UBERON:0005946;2.16e-26;1!UBERON:0005965;2.16e-26;1!UBERON:0002078;2.16e-26;1!UBERON:0002135;2.78e-26;1!UBERON:0002146;6.72e-26;1!UBERON:0005623;6.72e-26;1!UBERON:0010313;4.25e-23;10!UBERON:0002081;6.43e-14;2!UBERON:0003103;8.13e-10;61!UBERON:0004151;1.01e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.01e-74,3;UBERON:0009751,1.01e-74,3;UBERON:0000946,1.01e-74,3;UBERON:0002523,1.01e-74,3;UBERON:0005983,1.01e-74,3;UBERON:0002165,1.01e-74,3;UBERON:0002062,1.01e-74,3;UBERON:0007280,1.01e-74,3;UBERON:0002133,8.82e-51,2;UBERON:0007100,9.55e-45,27;UBERON:0000948,3.17e-37,24;UBERON:0005498,3.17e-37,24;UBERON:0004140,3.17e-37,24;UBERON:0009881,3.17e-37,24;UBERON:0004141,3.17e-37,24;UBERON:0003084,3.17e-37,24;UBERON:0007005,3.17e-37,24;UBERON:0004139,3.17e-37,24;UBERON:0004291,3.17e-37,24;UBERON:0004797,1.35e-32,7;UBERON:0002134,2.16e-26,1;UBERON:0005208,2.16e-26,1;UBERON:0005946,2.16e-26,1;UBERON:0005965,2.16e-26,1;UBERON:0002078,2.16e-26,1;UBERON:0002135,2.78e-26,1;UBERON:0002146,7.62e-26,1;UBERON:0005623,7.62e-26,1;UBERON:0010313,4.42e-23,10;UBERON:0002342,4.42e-23,10;UBERON:0005062,4.42e-23,10;UBERON:0003103,6.87e-18,68;UBERON:0002081,6.43e-14,2;UBERON:0010227,6.43e-14,2;UBERON:0004872,6.64e-11,83;UBERON:0001009,7.07e-11,112;UBERON:0003914,2.04e-10,117;UBERON:0004151,1.01e-09,3;UBERON:0004145,1.01e-09,3;UBERON:0004535,2.59e-08,109;UBERON:0001048,1.35e-07,160;UBERON:0010314,8.25e-07,132|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97937656639626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=28513 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1758 | |||
|TSSclassifier=S | |||
|UniProt=Q96KY9 | |||
|association_with_transcript=-66bp_to_ENST00000454642_5end | |||
|description=CAGE_peak_6_at_CDH19_5end | |||
|id=chr18:64271475..64271484,- | |||
|ontology_enrichment_celltype=CL:0000147!4.73e-07!14;CL:0002566!4.90e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.24e-09;3!CL:0000737;1.54e-07;4!CL:0002494;3.44e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.30e-09,3;CL:0000513,1.30e-09,3;CL:0000737,1.59e-07,4;CL:0002494,3.44e-07,16 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.37e-56;4!UBERON:0007284;2.37e-56;4!UBERON:0004140;6.72e-26;1!CL:0000513;1.24e-09;3!UBERON:0003104;8.89e-08;31 | |||
|ontology_enrichment_disease=DOID:114!1.51e-13!2;DOID:178!1.18e-07!1;DOID:326!1.18e-07!1;DOID:3978!1.18e-07!1;DOID:3394!1.18e-07!1;DOID:5844!1.18e-07!1;DOID:1287!3.41e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.72e-22!27;UBERON:0003978!3.95e-20!3;UBERON:0009751!3.95e-20!3;UBERON:0000946!3.95e-20!3;UBERON:0002523!3.95e-20!3;UBERON:0005983!3.95e-20!3;UBERON:0002165!3.95e-20!3;UBERON:0002062!3.95e-20!3;UBERON:0007280!3.95e-20!3;UBERON:0007023!6.41e-17!115;UBERON:0002133!4.27e-14!2;UBERON:0000948!2.61e-12!24;UBERON:0005498!2.61e-12!24;UBERON:0004140!2.61e-12!24;UBERON:0009881!2.61e-12!24;UBERON:0004141!2.61e-12!24;UBERON:0003084!2.61e-12!24;UBERON:0007005!2.61e-12!24;UBERON:0004139!2.61e-12!24;UBERON:0004291!2.61e-12!24;UBERON:0003103!8.25e-11!69;UBERON:0004151!1.48e-09!3;UBERON:0002134!6.59e-08!1;UBERON:0005208!6.59e-08!1;UBERON:0005946!6.59e-08!1;UBERON:0005965!6.59e-08!1;UBERON:0002078!6.59e-08!1;UBERON:0002135!7.03e-08!1;UBERON:0002146!9.10e-08!1;UBERON:0005623!9.10e-08!1;UBERON:0002084!1.10e-07!1;UBERON:0002082!1.10e-07!1;UBERON:0004706!1.10e-07!1;UBERON:0000989!1.33e-07!1;UBERON:0008811!1.33e-07!1;UBERON:0006258!1.33e-07!1;UBERON:0005876!1.33e-07!1;UBERON:0004874!1.33e-07!1;UBERON:0002038!3.01e-07!1;UBERON:0009661!3.01e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;8.86e-75;3!UBERON:0000946;8.86e-75;3!UBERON:0002133;8.82e-51;2!UBERON:0007100;2.58e-48;25!UBERON:0000948;1.42e-40;22!UBERON:0002134;2.16e-26;1!UBERON:0005208;2.16e-26;1!UBERON:0004145;2.16e-26;1!UBERON:0005946;2.16e-26;1!UBERON:0005965;2.16e-26;1!UBERON:0002078;2.16e-26;1!UBERON:0002135;2.78e-26;1!UBERON:0002146;6.72e-26;1!UBERON:0005623;6.72e-26;1!UBERON:0010313;4.25e-23;10!UBERON:0002081;6.43e-14;2!UBERON:0003103;8.13e-10;61!UBERON:0004151;1.01e-09;3 | |||
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|short_description=p6@CDH19 | |||
}} |
Revision as of 18:03, 11 September 2013
Short description: | p6@CDH19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CDH19_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_ENST00000454642_5end |
EntrezGene: | CDH19 |
HGNC: | 1758 |
UniProt: | Q96KY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.30e-09 | 3 |
cardiac muscle myoblast | 1.30e-09 | 3 |
striated muscle cell | 1.59e-07 | 4 |
cardiocyte | 3.44e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.