FFCP PHASE1:Hg19::chr18:56813732..56813760,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C184|description=CAGE_peak_at_chr18:56813732..56813760,+|id=chr18:56813732..56813760,+|ontology_enrichment_celltype=CL:0000167!7.98e-10!1;CL:0000164!7.98e-10!1;CL:0000502!7.98e-10!1;CL:0000172!7.98e-10!1;CL:0000173!7.98e-10!1;CL:0002351!7.98e-10!1;CL:1001319!4.15e-09!1;CL:1000600!4.15e-09!1|ontology_enrichment_celltype_v019=CL:0000167;1.84e-34;1!CL:0000164;1.84e-34;1!CL:0000502;1.84e-34;1!CL:0000172;1.84e-34;1!CL:0000173;1.84e-34;1|ontology_enrichment_celltype_v019_2=CL:0000167,1.84e-34,1;CL:0000164,1.84e-34,1;CL:0000502,1.84e-34,1;CL:0000172,1.84e-34,1;CL:0000173,1.84e-34,1;CL:0002351,1.84e-34,1|ontology_enrichment_development_v019=CL:0002351;1.84e-34;1!UBERON:0006298;3.61e-34;1!UBERON:0008801;7.06e-34;1|ontology_enrichment_disease=DOID:4430!7.98e-10!1|ontology_enrichment_disease_v019=DOID:4430;1.84e-34;1!DOID:5409;1.57e-09;4!DOID:169;7.17e-07;6|ontology_enrichment_disease_v019_2=DOID:4430,1.84e-34,1;DOID:5409,1.44e-09,4;DOID:169,7.17e-07,6|ontology_enrichment_uberon=UBERON:0001829!1.07e-17!2;UBERON:0001044!4.44e-13!6;UBERON:0003293!4.44e-13!6;UBERON:0003294!4.44e-13!6;UBERON:0010047!4.44e-13!6;UBERON:0000167!4.44e-13!6;UBERON:0001736!9.44e-10!1;UBERON:0006298!9.44e-10!1;UBERON:0001831!1.12e-09!1;UBERON:0001567!1.12e-09!1;UBERON:0008801!1.12e-09!1;UBERON:0001874!2.55e-09!1;UBERON:0004645!4.15e-09!1;UBERON:0001256!4.15e-09!1;UBERON:0001259!4.15e-09!1;UBERON:0003296!4.33e-09!4;UBERON:0010133!4.33e-09!4;UBERON:0003408!4.85e-08!10;UBERON:0002530!1.01e-07!59|ontology_enrichment_uberon_v019=UBERON:0001829;3.96e-66;2!UBERON:0001044;1.24e-49;6!UBERON:0003293;1.24e-49;6!UBERON:0003294;1.24e-49;6!UBERON:0010047;1.24e-49;6!UBERON:0003408;1.24e-49;6!UBERON:0000167;1.24e-49;6!UBERON:0001736;3.61e-34;1!UBERON:0001831;7.06e-34;1!UBERON:0001567;7.06e-34;1!UBERON:0001041;7.70e-22;14!UBERON:0004089;1.07e-17;2!UBERON:0000161;2.52e-16;19!UBERON:0000166;2.52e-16;19!UBERON:0000165;2.46e-11;28!UBERON:0002365;4.21e-10;31!UBERON:0002330;4.21e-10;31!UBERON:0004921;1.63e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.96e-66,2;UBERON:0001044,1.46e-49,6;UBERON:0003293,1.46e-49,6;UBERON:0003294,1.46e-49,6;UBERON:0010047,1.46e-49,6;UBERON:0000167,1.46e-49,6;UBERON:0001736,3.61e-34,1;UBERON:0006298,3.61e-34,1;UBERON:0001831,7.06e-34,1;UBERON:0001567,7.06e-34,1;UBERON:0008801,7.06e-34,1;UBERON:0003408,3.75e-30,10;UBERON:0004089,1.07e-17,2;UBERON:0000166,3.42e-14,22;UBERON:0000165,5.89e-11,29;UBERON:0000930,5.89e-11,29;UBERON:0002365,2.68e-10,31;UBERON:0002330,2.68e-10,31;UBERON:0000161,5.73e-09,36;UBERON:0001004,1.15e-07,74;UBERON:0001444,9.10e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93431990171464,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0.706437835654626,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,4.73250094702305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.98177383770023,0,0,32.4518934489451,0,97.0987374058699,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,5.04602211744995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p@chr18:56813732..56813760,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr18:56813732..56813760,+ | |||
|id=chr18:56813732..56813760,+ | |||
|ontology_enrichment_celltype=CL:0000167!7.98e-10!1;CL:0000164!7.98e-10!1;CL:0000502!7.98e-10!1;CL:0000172!7.98e-10!1;CL:0000173!7.98e-10!1;CL:0002351!7.98e-10!1;CL:1001319!4.15e-09!1;CL:1000600!4.15e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.84e-34;1!CL:0000164;1.84e-34;1!CL:0000502;1.84e-34;1!CL:0000172;1.84e-34;1!CL:0000173;1.84e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.84e-34,1;CL:0000164,1.84e-34,1;CL:0000502,1.84e-34,1;CL:0000172,1.84e-34,1;CL:0000173,1.84e-34,1;CL:0002351,1.84e-34,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.84e-34;1!UBERON:0006298;3.61e-34;1!UBERON:0008801;7.06e-34;1 | |||
|ontology_enrichment_disease=DOID:4430!7.98e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.84e-34;1!DOID:5409;1.57e-09;4!DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.84e-34,1;DOID:5409,1.44e-09,4;DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001829!1.07e-17!2;UBERON:0001044!4.44e-13!6;UBERON:0003293!4.44e-13!6;UBERON:0003294!4.44e-13!6;UBERON:0010047!4.44e-13!6;UBERON:0000167!4.44e-13!6;UBERON:0001736!9.44e-10!1;UBERON:0006298!9.44e-10!1;UBERON:0001831!1.12e-09!1;UBERON:0001567!1.12e-09!1;UBERON:0008801!1.12e-09!1;UBERON:0001874!2.55e-09!1;UBERON:0004645!4.15e-09!1;UBERON:0001256!4.15e-09!1;UBERON:0001259!4.15e-09!1;UBERON:0003296!4.33e-09!4;UBERON:0010133!4.33e-09!4;UBERON:0003408!4.85e-08!10;UBERON:0002530!1.01e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.96e-66;2!UBERON:0001044;1.24e-49;6!UBERON:0003293;1.24e-49;6!UBERON:0003294;1.24e-49;6!UBERON:0010047;1.24e-49;6!UBERON:0003408;1.24e-49;6!UBERON:0000167;1.24e-49;6!UBERON:0001736;3.61e-34;1!UBERON:0001831;7.06e-34;1!UBERON:0001567;7.06e-34;1!UBERON:0001041;7.70e-22;14!UBERON:0004089;1.07e-17;2!UBERON:0000161;2.52e-16;19!UBERON:0000166;2.52e-16;19!UBERON:0000165;2.46e-11;28!UBERON:0002365;4.21e-10;31!UBERON:0002330;4.21e-10;31!UBERON:0004921;1.63e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.96e-66,2;UBERON:0001044,1.46e-49,6;UBERON:0003293,1.46e-49,6;UBERON:0003294,1.46e-49,6;UBERON:0010047,1.46e-49,6;UBERON:0000167,1.46e-49,6;UBERON:0001736,3.61e-34,1;UBERON:0006298,3.61e-34,1;UBERON:0001831,7.06e-34,1;UBERON:0001567,7.06e-34,1;UBERON:0008801,7.06e-34,1;UBERON:0003408,3.75e-30,10;UBERON:0004089,1.07e-17,2;UBERON:0000166,3.42e-14,22;UBERON:0000165,5.89e-11,29;UBERON:0000930,5.89e-11,29;UBERON:0002365,2.68e-10,31;UBERON:0002330,2.68e-10,31;UBERON:0000161,5.73e-09,36;UBERON:0001004,1.15e-07,74;UBERON:0001444,9.10e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93431990171464,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0.706437835654626,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,4.73250094702305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.98177383770023,0,0,32.4518934489451,0,97.0987374058699,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,5.04602211744995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:56813732..56813760,+ | |||
}} |
Revision as of 17:54, 11 September 2013
Short description: | p@chr18:56813732..56813760, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:56813732..56813760, + |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.84e-34 | 1 |
enteroendocrine cell | 1.84e-34 | 1 |
type D enteroendocrine cell | 1.84e-34 | 1 |
somatostatin secreting cell | 1.84e-34 | 1 |
pancreatic D cell | 1.84e-34 | 1 |
progenitor cell of endocrine pancreas | 1.84e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.96e-66 | 2 |
saliva-secreting gland | 1.46e-49 | 6 |
gland of oral region | 1.46e-49 | 6 |
gland of foregut | 1.46e-49 | 6 |
oral gland | 1.46e-49 | 6 |
oral cavity | 1.46e-49 | 6 |
submandibular gland | 3.61e-34 | 1 |
submandibular gland primordium | 3.61e-34 | 1 |
parotid gland | 7.06e-34 | 1 |
cheek | 7.06e-34 | 1 |
parotid gland primordium | 7.06e-34 | 1 |
gland of gut | 3.75e-30 | 10 |
midface | 1.07e-17 | 2 |
oral opening | 3.42e-14 | 22 |
mouth | 5.89e-11 | 29 |
stomodeum | 5.89e-11 | 29 |
exocrine gland | 2.68e-10 | 31 |
exocrine system | 2.68e-10 | 31 |
orifice | 5.73e-09 | 36 |
respiratory system | 1.15e-07 | 74 |
subdivision of head | 9.10e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.84e-34 | 1 |
lung small cell carcinoma | 1.44e-09 | 4 |
neuroendocrine tumor | 7.17e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.