FFCP PHASE1:Hg19::chr18:42260236..42260250,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26040|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15573|TSSclassifier=S|UniProt=Q9Y6X0|association_with_transcript=98bp_to_ENST00000426838,NM_001130110,uc002lay.2_5end|description=CAGE_peak_7_at_SETBP1_5end|id=chr18:42260236..42260250,+|ontology_enrichment_celltype=CL:0000945!2.56e-09!24;CL:0000826!2.56e-09!24;CL:0000236!6.20e-08!14;CL:0000542!5.32e-07!53;CL:0000051!5.32e-07!53|ontology_enrichment_celltype_v019=CL:0000784;9.78e-13;3!CL:0000875;2.49e-12;3!CL:0002396;2.49e-12;3!CL:0000236;5.15e-11;13!CL:0000047;3.41e-09;2!CL:0000945;1.69e-07;24|ontology_enrichment_celltype_v019_2=CL:0000236,1.59e-13,14;CL:0000784,7.93e-13,3;CL:0000875,8.95e-13,3;CL:0002396,8.95e-13,3;CL:0000945,1.82e-07,24;CL:0000826,1.82e-07,24|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.24e-15!82;UBERON:0000073!2.29e-14!94;UBERON:0001016!2.29e-14!94;UBERON:0005743!2.90e-14!86;UBERON:0007023!7.09e-12!115;UBERON:0002780!7.13e-12!41;UBERON:0001890!7.13e-12!41;UBERON:0006240!7.13e-12!41;UBERON:0002616!1.24e-11!59;UBERON:0001049!1.78e-11!57;UBERON:0005068!1.78e-11!57;UBERON:0006241!1.78e-11!57;UBERON:0007135!1.78e-11!57;UBERON:0003080!2.50e-11!42;UBERON:0002619!2.67e-11!22;UBERON:0000956!3.56e-11!25;UBERON:0000203!3.56e-11!25;UBERON:0000955!3.94e-11!69;UBERON:0006238!3.94e-11!69;UBERON:0001869!4.36e-11!32;UBERON:0001893!5.26e-11!34;UBERON:0000153!1.62e-10!129;UBERON:0007811!1.62e-10!129;UBERON:0002791!1.93e-10!33;UBERON:0001950!5.27e-10!20;UBERON:0004121!1.20e-09!169;UBERON:0002020!1.66e-09!34;UBERON:0003528!1.66e-09!34;UBERON:0000033!3.67e-09!123;UBERON:0000924!6.69e-09!173;UBERON:0006601!6.69e-09!173;UBERON:0003056!8.79e-09!61;UBERON:0003075!1.07e-08!86;UBERON:0007284!1.07e-08!86;UBERON:0002346!1.11e-07!90|ontology_enrichment_uberon_v019=UBERON:0001950;1.74e-17;20!UBERON:0002619;8.63e-16;22!UBERON:0000956;9.75e-14;25!UBERON:0000203;9.75e-14;25!UBERON:0002791;3.06e-11;32!UBERON:0003528;4.74e-11;34!UBERON:0002020;4.74e-11;34!UBERON:0001869;8.98e-11;32!UBERON:0001893;1.11e-09;34!UBERON:0002360;8.77e-09;2!UBERON:0000094;8.77e-09;2!UBERON:0010743;8.77e-09;2!UBERON:0001872;6.78e-08;5!UBERON:0002780;1.42e-07;41!UBERON:0001890;1.42e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.24e-17,20;UBERON:0002619,1.08e-15,22;UBERON:0000956,1.19e-13,25;UBERON:0000203,1.19e-13,25;UBERON:0002791,1.84e-12,32;UBERON:0001869,1.84e-12,32;UBERON:0003528,1.28e-11,34;UBERON:0002020,1.28e-11,34;UBERON:0001893,1.28e-11,34;UBERON:0001017,2.69e-11,81;UBERON:0001016,8.62e-10,89;UBERON:0002780,2.59e-09,41;UBERON:0001890,2.59e-09,41;UBERON:0003080,2.59e-09,41;UBERON:0006240,2.59e-09,41;UBERON:0002360,1.08e-08,2;UBERON:0000094,1.08e-08,2;UBERON:0010743,1.08e-08,2;UBERON:0001872,7.96e-08,5;UBERON:0000955,7.56e-07,68;UBERON:0006238,7.56e-07,68;UBERON:0003056,9.00e-07,61;UBERON:0000073,9.05e-07,53;UBERON:0002616,9.05e-07,53|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.251085279189606,0.534893840235659,0.903106483949403,0.944529375764151,0,0.383829398097213,0.928896739896456,0,0,0,0.309868802321207,0.284338464974843,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0.211255286311942,0.637812899895131,0.628975936525128,0,0,0.32145117339416,1.14005097496499,1.79025009479181,1.82664153764634,0,0.546138611262131,2.66852776159066,1.28019066769952,0.400395987036012,1.14950487990897,0.661044872784862,0.954053754535364,3.41527781465669,2.34894875748376,2.29363936875137,0,2.24203425192614,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0,1.24930726552346,0,0.821127996921047,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.472674085820339,0.665188192387692,0.263504357079378,0.392937226493138,0,0,0,0,0.132957960518865,2.38490624305342,1.71598473234038,1.11437250398869,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0.538168907066586,0.640672166455702,0.423863802319124,0.600182192168805,0.206105058476878,0,0.18611685633159,1.0126579934476,0.389748020644795,0.252433774244115,0.0920498986422993,0.646584227275248,0,0,0,0,0.272746120590835,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26040 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15573 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y6X0 | |||
|association_with_transcript=98bp_to_ENST00000426838,NM_001130110,uc002lay.2_5end | |||
|description=CAGE_peak_7_at_SETBP1_5end | |||
|id=chr18:42260236..42260250,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.56e-09!24;CL:0000826!2.56e-09!24;CL:0000236!6.20e-08!14;CL:0000542!5.32e-07!53;CL:0000051!5.32e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000784;9.78e-13;3!CL:0000875;2.49e-12;3!CL:0002396;2.49e-12;3!CL:0000236;5.15e-11;13!CL:0000047;3.41e-09;2!CL:0000945;1.69e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.59e-13,14;CL:0000784,7.93e-13,3;CL:0000875,8.95e-13,3;CL:0002396,8.95e-13,3;CL:0000945,1.82e-07,24;CL:0000826,1.82e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.24e-15!82;UBERON:0000073!2.29e-14!94;UBERON:0001016!2.29e-14!94;UBERON:0005743!2.90e-14!86;UBERON:0007023!7.09e-12!115;UBERON:0002780!7.13e-12!41;UBERON:0001890!7.13e-12!41;UBERON:0006240!7.13e-12!41;UBERON:0002616!1.24e-11!59;UBERON:0001049!1.78e-11!57;UBERON:0005068!1.78e-11!57;UBERON:0006241!1.78e-11!57;UBERON:0007135!1.78e-11!57;UBERON:0003080!2.50e-11!42;UBERON:0002619!2.67e-11!22;UBERON:0000956!3.56e-11!25;UBERON:0000203!3.56e-11!25;UBERON:0000955!3.94e-11!69;UBERON:0006238!3.94e-11!69;UBERON:0001869!4.36e-11!32;UBERON:0001893!5.26e-11!34;UBERON:0000153!1.62e-10!129;UBERON:0007811!1.62e-10!129;UBERON:0002791!1.93e-10!33;UBERON:0001950!5.27e-10!20;UBERON:0004121!1.20e-09!169;UBERON:0002020!1.66e-09!34;UBERON:0003528!1.66e-09!34;UBERON:0000033!3.67e-09!123;UBERON:0000924!6.69e-09!173;UBERON:0006601!6.69e-09!173;UBERON:0003056!8.79e-09!61;UBERON:0003075!1.07e-08!86;UBERON:0007284!1.07e-08!86;UBERON:0002346!1.11e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.74e-17;20!UBERON:0002619;8.63e-16;22!UBERON:0000956;9.75e-14;25!UBERON:0000203;9.75e-14;25!UBERON:0002791;3.06e-11;32!UBERON:0003528;4.74e-11;34!UBERON:0002020;4.74e-11;34!UBERON:0001869;8.98e-11;32!UBERON:0001893;1.11e-09;34!UBERON:0002360;8.77e-09;2!UBERON:0000094;8.77e-09;2!UBERON:0010743;8.77e-09;2!UBERON:0001872;6.78e-08;5!UBERON:0002780;1.42e-07;41!UBERON:0001890;1.42e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.24e-17,20;UBERON:0002619,1.08e-15,22;UBERON:0000956,1.19e-13,25;UBERON:0000203,1.19e-13,25;UBERON:0002791,1.84e-12,32;UBERON:0001869,1.84e-12,32;UBERON:0003528,1.28e-11,34;UBERON:0002020,1.28e-11,34;UBERON:0001893,1.28e-11,34;UBERON:0001017,2.69e-11,81;UBERON:0001016,8.62e-10,89;UBERON:0002780,2.59e-09,41;UBERON:0001890,2.59e-09,41;UBERON:0003080,2.59e-09,41;UBERON:0006240,2.59e-09,41;UBERON:0002360,1.08e-08,2;UBERON:0000094,1.08e-08,2;UBERON:0010743,1.08e-08,2;UBERON:0001872,7.96e-08,5;UBERON:0000955,7.56e-07,68;UBERON:0006238,7.56e-07,68;UBERON:0003056,9.00e-07,61;UBERON:0000073,9.05e-07,53;UBERON:0002616,9.05e-07,53 | |||
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| |||
|short_description=p7@SETBP1 | |||
}} |
Revision as of 17:31, 11 September 2013
Short description: | p7@SETBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SETBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 98bp_to_ENST00000426838, NM_001130110, uc002lay.2_5end |
EntrezGene: | SETBP1 |
HGNC: | 15573 |
UniProt: | Q9Y6X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.59e-13 | 14 |
plasmacytoid dendritic cell | 7.93e-13 | 3 |
non-classical monocyte | 8.95e-13 | 3 |
CD14-low, CD16-positive monocyte | 8.95e-13 | 3 |
lymphocyte of B lineage | 1.82e-07 | 24 |
pro-B cell | 1.82e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
neocortex | 2.24e-17 | 20 |
regional part of cerebral cortex | 1.08e-15 | 22 |
cerebral cortex | 1.19e-13 | 25 |
pallium | 1.19e-13 | 25 |
regional part of telencephalon | 1.84e-12 | 32 |
cerebral hemisphere | 1.84e-12 | 32 |
brain grey matter | 1.28e-11 | 34 |
gray matter | 1.28e-11 | 34 |
telencephalon | 1.28e-11 | 34 |
central nervous system | 2.69e-11 | 81 |
nervous system | 8.62e-10 | 89 |
regional part of forebrain | 2.59e-09 | 41 |
forebrain | 2.59e-09 | 41 |
anterior neural tube | 2.59e-09 | 41 |
future forebrain | 2.59e-09 | 41 |
meninx | 1.08e-08 | 2 |
membrane organ | 1.08e-08 | 2 |
meningeal cluster | 1.08e-08 | 2 |
parietal lobe | 7.96e-08 | 5 |
brain | 7.56e-07 | 68 |
future brain | 7.56e-07 | 68 |
pre-chordal neural plate | 9.00e-07 | 61 |
regional part of nervous system | 9.05e-07 | 53 |
regional part of brain | 9.05e-07 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.