FFCP PHASE1:Hg19::chr18:42260030..42260055,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26040|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15573|TSSclassifier=S|UniProt=Q9Y6X0|association_with_transcript=-82bp_to_ENST00000426838,NM_001130110,uc002lay.2_5end|description=CAGE_peak_3_at_SETBP1_5end|id=chr18:42260030..42260055,+|ontology_enrichment_celltype=CL:0000236!2.42e-08!14|ontology_enrichment_celltype_v019=CL:0000236;9.24e-14;13!CL:0000945;8.99e-08;24|ontology_enrichment_celltype_v019_2=CL:0000236,2.49e-14,14;CL:0000945,8.83e-08,24;CL:0000826,8.83e-08,24|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.26e-29!115;UBERON:0001017!3.99e-20!82;UBERON:0005743!4.07e-19!86;UBERON:0001049!2.45e-18!57;UBERON:0005068!2.45e-18!57;UBERON:0006241!2.45e-18!57;UBERON:0007135!2.45e-18!57;UBERON:0000073!1.83e-17!94;UBERON:0001016!1.83e-17!94;UBERON:0002616!8.36e-17!59;UBERON:0000955!1.05e-16!69;UBERON:0006238!1.05e-16!69;UBERON:0003080!3.41e-15!42;UBERON:0001893!9.28e-15!34;UBERON:0002780!1.01e-14!41;UBERON:0001890!1.01e-14!41;UBERON:0006240!1.01e-14!41;UBERON:0002791!3.37e-14!33;UBERON:0001869!3.89e-14!32;UBERON:0002020!7.31e-14!34;UBERON:0003528!7.31e-14!34;UBERON:0004121!1.40e-12!169;UBERON:0002619!2.89e-12!22;UBERON:0000956!3.06e-12!25;UBERON:0000203!3.06e-12!25;UBERON:0000153!7.49e-12!129;UBERON:0007811!7.49e-12!129;UBERON:0000924!8.07e-12!173;UBERON:0006601!8.07e-12!173;UBERON:0001950!1.97e-11!20;UBERON:0003075!2.66e-11!86;UBERON:0007284!2.66e-11!86;UBERON:0000033!2.31e-10!123;UBERON:0002346!3.15e-10!90;UBERON:0003056!5.83e-09!61|ontology_enrichment_uberon_v019=UBERON:0002619;5.36e-21;22!UBERON:0001950;1.60e-19;20!UBERON:0001869;2.03e-19;32!UBERON:0001893;2.94e-18;34!UBERON:0002791;7.73e-18;32!UBERON:0000956;1.15e-17;25!UBERON:0000203;1.15e-17;25!UBERON:0003528;7.49e-17;34!UBERON:0002020;7.49e-17;34!UBERON:0002780;8.34e-15;41!UBERON:0001890;8.34e-15;41!UBERON:0000073;2.10e-10;53!UBERON:0002616;2.10e-10;53!UBERON:0001017;3.03e-08;75!UBERON:0007023;3.69e-08;114!UBERON:0000955;1.21e-07;68!UBERON:0001016;1.44e-07;83!UBERON:0002021;4.94e-07;5!UBERON:0000200;9.66e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.86e-32,114;UBERON:0001869,5.81e-22,32;UBERON:0001893,8.74e-22,34;UBERON:0002619,3.03e-21,22;UBERON:0002780,1.59e-20,41;UBERON:0001890,1.59e-20,41;UBERON:0003080,1.59e-20,41;UBERON:0006240,1.59e-20,41;UBERON:0002791,4.67e-20,32;UBERON:0001950,8.98e-20,20;UBERON:0003528,1.20e-19,34;UBERON:0002020,1.20e-19,34;UBERON:0000073,9.95e-19,53;UBERON:0002616,9.95e-19,53;UBERON:0001017,1.14e-18,81;UBERON:0001049,2.15e-18,56;UBERON:0005068,2.15e-18,56;UBERON:0006241,2.15e-18,56;UBERON:0007135,2.15e-18,56;UBERON:0001016,3.62e-18,89;UBERON:0000956,7.02e-18,25;UBERON:0000203,7.02e-18,25;UBERON:0000955,5.37e-15,68;UBERON:0006238,5.37e-15,68;UBERON:0003056,3.45e-12,61;UBERON:0003075,4.78e-11,82;UBERON:0007284,4.78e-11,82;UBERON:0011216,1.54e-10,223;UBERON:0002346,5.18e-10,86;UBERON:0004121,1.32e-09,171;UBERON:0000924,1.32e-09,171;UBERON:0006601,1.32e-09,171;UBERON:0010371,1.23e-07,104;UBERON:0002021,6.90e-07,5;UBERON:0000200,9.62e-07,6|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0.491467873003018,0.697801167972428,0.655324116390517,0,0.123766352960047,0.662794751455832,0,0,0,0,0.61560529038394,0.204000691244253,0.626909442956176,0.85870796139317,0.273748850145768,0.87879847716362,0.840547463227464,0.656804715599566,0.708397031823113,0.393364276848904,1.91914699048606,1.23852898652861,0,0.30120591877825,0.369754010166788,0.542270404062111,0,0.880801318004542,0.553995408531877,0.802177789880567,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0,0,0.47296445977717,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0,0.398927315243264,0.426224750532694,0,0,0,0.502497330513487,0,0,1.21079900526674,0,0,3.38008458099107,3.4016687994407,1.25795187305026,0,0,0,4.56020389985998,6.56425034756997,4.38393969035121,3.51992488922645,8.19207916893197,8.00558328477199,9.81479511902967,3.2031678962881,7.47178171940828,4.62731410949403,4.77026877267682,14.2303242277362,7.6340834618222,12.2327433000073,5.28685314316103,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0.443067789167242,0,0.128091319725675,0.390178042679635,0.822189523018381,0.276350017785848,1.15921234294021,0,0,0,0.906474741580529,0.383220493601921,0,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0.473554504088034,0.821127996921047,1.81446068902259,4.27904313253612,1.88271725047639,2.43806866313962,0,0.12786256184353,0.722878304769133,0.50133791063589,0.289693037921647,0,0.486634870302636,1.13441780596881,0.886917589850256,0.614843499851882,1.0478326039817,0,0,1.29818957461873,0.696518949197069,0.531831842075461,4.05434061319081,3.43196946468077,5.57186251994347,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26040 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15573 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y6X0 | |||
|association_with_transcript=-82bp_to_ENST00000426838,NM_001130110,uc002lay.2_5end | |||
|description=CAGE_peak_3_at_SETBP1_5end | |||
|id=chr18:42260030..42260055,+ | |||
|ontology_enrichment_celltype=CL:0000236!2.42e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.24e-14;13!CL:0000945;8.99e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.49e-14,14;CL:0000945,8.83e-08,24;CL:0000826,8.83e-08,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;5.36e-21;22!UBERON:0001950;1.60e-19;20!UBERON:0001869;2.03e-19;32!UBERON:0001893;2.94e-18;34!UBERON:0002791;7.73e-18;32!UBERON:0000956;1.15e-17;25!UBERON:0000203;1.15e-17;25!UBERON:0003528;7.49e-17;34!UBERON:0002020;7.49e-17;34!UBERON:0002780;8.34e-15;41!UBERON:0001890;8.34e-15;41!UBERON:0000073;2.10e-10;53!UBERON:0002616;2.10e-10;53!UBERON:0001017;3.03e-08;75!UBERON:0007023;3.69e-08;114!UBERON:0000955;1.21e-07;68!UBERON:0001016;1.44e-07;83!UBERON:0002021;4.94e-07;5!UBERON:0000200;9.66e-07;6 | |||
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| |||
|short_description=p3@SETBP1 | |||
}} |
Revision as of 17:31, 11 September 2013
Short description: | p3@SETBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SETBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_ENST00000426838, NM_001130110, uc002lay.2_5end |
EntrezGene: | SETBP1 |
HGNC: | 15573 |
UniProt: | Q9Y6X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.49e-14 | 14 |
lymphocyte of B lineage | 8.83e-08 | 24 |
pro-B cell | 8.83e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.86e-32 | 114 |
cerebral hemisphere | 5.81e-22 | 32 |
telencephalon | 8.74e-22 | 34 |
regional part of cerebral cortex | 3.03e-21 | 22 |
regional part of forebrain | 1.59e-20 | 41 |
forebrain | 1.59e-20 | 41 |
anterior neural tube | 1.59e-20 | 41 |
future forebrain | 1.59e-20 | 41 |
regional part of telencephalon | 4.67e-20 | 32 |
neocortex | 8.98e-20 | 20 |
brain grey matter | 1.20e-19 | 34 |
gray matter | 1.20e-19 | 34 |
regional part of nervous system | 9.95e-19 | 53 |
regional part of brain | 9.95e-19 | 53 |
central nervous system | 1.14e-18 | 81 |
neural tube | 2.15e-18 | 56 |
neural rod | 2.15e-18 | 56 |
future spinal cord | 2.15e-18 | 56 |
neural keel | 2.15e-18 | 56 |
nervous system | 3.62e-18 | 89 |
cerebral cortex | 7.02e-18 | 25 |
pallium | 7.02e-18 | 25 |
brain | 5.37e-15 | 68 |
future brain | 5.37e-15 | 68 |
pre-chordal neural plate | 3.45e-12 | 61 |
neural plate | 4.78e-11 | 82 |
presumptive neural plate | 4.78e-11 | 82 |
organ system subdivision | 1.54e-10 | 223 |
neurectoderm | 5.18e-10 | 86 |
ectoderm-derived structure | 1.32e-09 | 171 |
ectoderm | 1.32e-09 | 171 |
presumptive ectoderm | 1.32e-09 | 171 |
ecto-epithelium | 1.23e-07 | 104 |
occipital lobe | 6.90e-07 | 5 |
gyrus | 9.62e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.