FFCP PHASE1:Hg19::chr18:34408848..34408859,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25941|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24561|TSSclassifier=S|UniProt=|association_with_transcript=80bp_to_ENST00000383056_5end|description=CAGE_peak_5_at_TPGS2_5end|id=chr18:34408848..34408859,-|ontology_enrichment_celltype=CL:0000222!1.92e-13!119;CL:0000220!8.62e-11!246;CL:0002321!2.09e-10!248;CL:0000680!8.70e-10!57;CL:0000056!8.70e-10!57;CL:0000355!8.70e-10!57;CL:0000183!2.90e-09!59;CL:0000192!3.83e-09!42;CL:0000514!3.83e-09!42;CL:0000055!6.89e-09!180;CL:0000187!1.08e-08!54;CL:0000144!1.45e-08!625;CL:0000393!4.03e-08!60;CL:0000211!4.03e-08!60;CL:0000012!1.80e-07!682;CL:0000548!2.10e-07!679;CL:0000004!2.10e-07!679;CL:0000255!2.10e-07!679;CL:0000359!2.67e-07!32;CL:0002371!2.85e-07!591|ontology_enrichment_celltype_v019=CL:0002139;1.44e-07;24|ontology_enrichment_celltype_v019_2=CL:0000222,2.21e-10,121;CL:0002321,5.07e-08,250;CL:0002139,2.72e-07,24;CL:0000115,6.33e-07,36|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000119!5.14e-11!312;UBERON:0004290!5.70e-11!70;UBERON:0000486!8.08e-11!82;UBERON:0000483!4.73e-10!309;UBERON:0000914!1.13e-09!83;UBERON:0002329!1.13e-09!83;UBERON:0003077!1.13e-09!83;UBERON:0003059!1.13e-09!83;UBERON:0007282!1.13e-09!83;UBERON:0009618!1.13e-09!83;UBERON:0007285!1.13e-09!83;UBERON:0002049!1.14e-09!79;UBERON:0007798!1.14e-09!79;UBERON:0000055!1.75e-08!69;UBERON:0001134!8.98e-08!61;UBERON:0002036!8.98e-08!61;UBERON:0003082!8.98e-08!61;UBERON:0002385!1.95e-07!63;UBERON:0001015!1.95e-07!63;UBERON:0000383!1.95e-07!63;UBERON:0001981!2.48e-07!60;UBERON:0007500!2.48e-07!60;UBERON:0004537!2.48e-07!60;UBERON:0006965!2.48e-07!60|ontology_enrichment_uberon_v019=UBERON:0001737;2.36e-07;9!UBERON:0001557;2.36e-07;9!UBERON:0002067;5.96e-07;9!UBERON:0000487;7.32e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.17e-12,78;UBERON:0007798,2.17e-12,78;UBERON:0007503,2.34e-09,78;UBERON:0000055,7.25e-09,68;UBERON:0002329,1.02e-08,71;UBERON:0003059,1.02e-08,71;UBERON:0007282,1.02e-08,71;UBERON:0004290,1.02e-08,71;UBERON:0009618,1.02e-08,71;UBERON:0000119,1.12e-08,309;UBERON:0000490,1.85e-08,148;UBERON:0003077,1.87e-08,72;UBERON:0007285,1.87e-08,72;UBERON:0007524,3.35e-08,73;UBERON:0007500,7.99e-08,59;UBERON:0001981,7.99e-08,59;UBERON:0004537,7.99e-08,59;UBERON:0006965,7.99e-08,59;UBERON:0001737,8.47e-08,9;UBERON:0000483,1.41e-07,306;UBERON:0000486,3.29e-07,83;UBERON:0002067,4.04e-07,9;UBERON:0004016,4.04e-07,9;UBERON:0010083,4.04e-07,9|phase1_expression=0.726713517082227,0.428201047781966,1.55049844505568,1.0007329835313,0,1.74467704820074,0,1.26343974685366,0.261185628199839,1.22866968250754,0,0.436882744260345,0.263766978228454,0.74259811776028,0.662794751455832,0,0.602694528023977,0.730310090387373,0.487932798790507,4.062994916534,3.67201244239655,2.82109249330279,2.57612388417951,1.36874425072884,1.38096903554283,0,0.328402357799783,0.157421562627358,0.786728553697808,0,0.309632246632152,0,0.90361775633475,0.369754010166788,0.154934401160603,0.142169232487422,0.880801318004542,1.10799081706375,1.80490002723128,0.651032612147555,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0,0.870627715885752,0,1.24564449799115,0,0,0.65156653411535,0,0,0.632924774881769,1.05627643155971,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,1.71007646244749,0.59675003159727,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,0,0.526768169550154,0.196709770113833,0.393010762749165,0,0.501559486172034,0,0,0,1.00269411196656,0,0.443067789167242,0.812411591295047,0.512365278902701,0.260118695119756,0.328875809207352,0,0,0.14828656316206,0,0,0.566546713487831,0.766440987203842,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0.802320587350522,0.434473211648397,0,0.670700859703636,0.255725123687061,1.44575660953827,2.00535164254356,2.17269778441236,0,0,1.41802225746102,1.99556457716308,3.16205228495254,0.392937226493138,0.364295288292542,0,0,0.174129737299267,0,0,0,0.371457501329565,0.39752481473341,2.58070378531837,1.04142150482278,2.26123176769604,3.35599548967925,2.75118041940067,1.04497483268405,1.03366703667732,0.35576626268671,1.00416183829401,3.22263453687318,1.52054421143703,0,0.367663080345869,2.43042584364528,0.892997282840798,2.2452937262617,1.57656072676651,3.06633274931766,0.949265659568129,0.732806975721629,1.31780417436063,0,0.436094052142534,0.496971951695318,0.379891534993739,0.529636723252875,0.286836620748814,0,0.560677600142307,1.06748995729705,1.48000529050296,0,0.538842688278752,0.817309515567294,2.11900398702904,0,0.70296429550139,1.24864030732128,1.71141546463335,1.19558944441441,0.822041490506354,2.10434827678571,1.82586048712923,0.2041541712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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24561 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=80bp_to_ENST00000383056_5end | |||
|description=CAGE_peak_5_at_TPGS2_5end | |||
|id=chr18:34408848..34408859,- | |||
|ontology_enrichment_celltype=CL:0000222!1.92e-13!119;CL:0000220!8.62e-11!246;CL:0002321!2.09e-10!248;CL:0000680!8.70e-10!57;CL:0000056!8.70e-10!57;CL:0000355!8.70e-10!57;CL:0000183!2.90e-09!59;CL:0000192!3.83e-09!42;CL:0000514!3.83e-09!42;CL:0000055!6.89e-09!180;CL:0000187!1.08e-08!54;CL:0000144!1.45e-08!625;CL:0000393!4.03e-08!60;CL:0000211!4.03e-08!60;CL:0000012!1.80e-07!682;CL:0000548!2.10e-07!679;CL:0000004!2.10e-07!679;CL:0000255!2.10e-07!679;CL:0000359!2.67e-07!32;CL:0002371!2.85e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.44e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.21e-10,121;CL:0002321,5.07e-08,250;CL:0002139,2.72e-07,24;CL:0000115,6.33e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!5.14e-11!312;UBERON:0004290!5.70e-11!70;UBERON:0000486!8.08e-11!82;UBERON:0000483!4.73e-10!309;UBERON:0000914!1.13e-09!83;UBERON:0002329!1.13e-09!83;UBERON:0003077!1.13e-09!83;UBERON:0003059!1.13e-09!83;UBERON:0007282!1.13e-09!83;UBERON:0009618!1.13e-09!83;UBERON:0007285!1.13e-09!83;UBERON:0002049!1.14e-09!79;UBERON:0007798!1.14e-09!79;UBERON:0000055!1.75e-08!69;UBERON:0001134!8.98e-08!61;UBERON:0002036!8.98e-08!61;UBERON:0003082!8.98e-08!61;UBERON:0002385!1.95e-07!63;UBERON:0001015!1.95e-07!63;UBERON:0000383!1.95e-07!63;UBERON:0001981!2.48e-07!60;UBERON:0007500!2.48e-07!60;UBERON:0004537!2.48e-07!60;UBERON:0006965!2.48e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.36e-07;9!UBERON:0001557;2.36e-07;9!UBERON:0002067;5.96e-07;9!UBERON:0000487;7.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.17e-12,78;UBERON:0007798,2.17e-12,78;UBERON:0007503,2.34e-09,78;UBERON:0000055,7.25e-09,68;UBERON:0002329,1.02e-08,71;UBERON:0003059,1.02e-08,71;UBERON:0007282,1.02e-08,71;UBERON:0004290,1.02e-08,71;UBERON:0009618,1.02e-08,71;UBERON:0000119,1.12e-08,309;UBERON:0000490,1.85e-08,148;UBERON:0003077,1.87e-08,72;UBERON:0007285,1.87e-08,72;UBERON:0007524,3.35e-08,73;UBERON:0007500,7.99e-08,59;UBERON:0001981,7.99e-08,59;UBERON:0004537,7.99e-08,59;UBERON:0006965,7.99e-08,59;UBERON:0001737,8.47e-08,9;UBERON:0000483,1.41e-07,306;UBERON:0000486,3.29e-07,83;UBERON:0002067,4.04e-07,9;UBERON:0004016,4.04e-07,9;UBERON:0010083,4.04e-07,9 | |||
|phase1_expression=0.726713517082227,0.428201047781966,1.55049844505568,1.0007329835313,0,1.74467704820074,0,1.26343974685366,0.261185628199839,1.22866968250754,0,0.436882744260345,0.263766978228454,0.74259811776028,0.662794751455832,0,0.602694528023977,0.730310090387373,0.487932798790507,4.062994916534,3.67201244239655,2.82109249330279,2.57612388417951,1.36874425072884,1.38096903554283,0,0.328402357799783,0.157421562627358,0.786728553697808,0,0.309632246632152,0,0.90361775633475,0.369754010166788,0.154934401160603,0.142169232487422,0.880801318004542,1.10799081706375,1.80490002723128,0.651032612147555,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0,0.870627715885752,0,1.24564449799115,0,0,0.65156653411535,0,0,0.632924774881769,1.05627643155971,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,1.71007646244749,0.59675003159727,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,0,0.526768169550154,0.196709770113833,0.393010762749165,0,0.501559486172034,0,0,0,1.00269411196656,0,0.443067789167242,0.812411591295047,0.512365278902701,0.260118695119756,0.328875809207352,0,0,0.14828656316206,0,0,0.566546713487831,0.766440987203842,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0.802320587350522,0.434473211648397,0,0.670700859703636,0.255725123687061,1.44575660953827,2.00535164254356,2.17269778441236,0,0,1.41802225746102,1.99556457716308,3.16205228495254,0.392937226493138,0.364295288292542,0,0,0.174129737299267,0,0,0,0.371457501329565,0.39752481473341,2.58070378531837,1.04142150482278,2.26123176769604,3.35599548967925,2.75118041940067,1.04497483268405,1.03366703667732,0.35576626268671,1.00416183829401,3.22263453687318,1.52054421143703,0,0.367663080345869,2.43042584364528,0.892997282840798,2.2452937262617,1.57656072676651,3.06633274931766,0.949265659568129,0.732806975721629,1.31780417436063,0,0.436094052142534,0.496971951695318,0.379891534993739,0.529636723252875,0.286836620748814,0,0.560677600142307,1.06748995729705,1.48000529050296,0,0.538842688278752,0.817309515567294,2.11900398702904,0,0.70296429550139,1.24864030732128,1.71141546463335,1.19558944441441,0.822041490506354,2.10434827678571,1.82586048712923,0.204154171254893,0.61417158655884,0.309977343527296,0,0.247266929278557,0.910161361938026,4.31170885089743,0.673344455816265,0.250237039743928,0,0,0.919463387397059,0.45071417671979,1.02088964844019,0,2.13557388818567,0.211931901159562,0,1.33968288009971,0.257640540045629,1.48893485065272,0.168776332241266,1.36411807225678,0.252433774244115,2.30124746605748,0.161646056818812,0.710019185033229,1.71278566986988,2.03472710772585,1.54608682530637,0.272746120590835,0.573609190778008,0,0.265059536642971,0.580969714347592,0.621966330092223,0.504641701751257,0.36497735907583,4.69348596989448,4.5026865673502,4.14404764057442,2.3218396401599,1.44375896333917,1.77460200059766,1.51726221070292,1.20505514941741,2.20587945464788,1.30727666455444,1.42362371466658,1.34831308160164,2.5508790466295,1.92373578473195,2.21446636387394,1.40241773803446,1.2347220339942,0,0,0,0,1.7658523976586,0,1.02940686179115,2.52425656439839,1.1240175325762,0.603173834469785,0.370353780634118,0.325808305310325,0,8.6598805215164,0.34779121492523,1.40890433082986,1.73239737313289,0,1.71228737011138,0.790204397959275,0,0,0,0,0,1.00789276919316,1.27597587518148,0.447792613514241,0,0.383382679165211,1.97065295158377,0.44024217006613,0.207328115540772,0.144119953416961,0.12624243342638,0.126995788584338,0,1.17217447210047,0,0.102827492703324,0,0,5.49442313292267,3.48768055066624,3.3735611477637,0.387815147273333,0,1.690605505112,0.531876233169741,0,1.02882949704857,1.41849132023278,1.8649552531127,0.285955987316295,0,0,0.977208552881205,0,0.791951872933429,0.301439377059586,0.871533458600294,0.899756920638513,1.2162378064119,0.502257091432126,4.21667878966063,2.15662369942424,2.29723871668228,1.42636905040718,2.02693829334611,1.64381058040307,1.43248770591916,0.448340575974109,0.394061520403854,0.215627574859517,0.256686072559497,1.52456774533478,2.60279707715243,1.54657762555539,0.502548796003046,0,0,0,0.414415513436035,0,3.00102312635806,0,0.831883446123229,0.892144943985809,0.473107245101804,0.819989904948992,0.601892199455438,0,0,0,0,1.65078867489357,1.76221041716467,0.343143423810856,0.413536052245775,0.647142602455851,0.213455115606889,0,0,0.907170879989041,1.73675465473144,0.153461973288062,0.841980283299221,1.79394808957981,2.04682899626681,0.804269605718038,0,0.154209693802656,0.532685175939381,0.574890092096664,1.55776328755086,1.04589340613963,0,2.40607764363942,0.460404944679482,0.574072240823034,0.728364672026868,1.18011973463482,0.451199612907412,1.23224539367064,3.13739907670742,0,0.316654886678627,1.13733384070897,0.680374821106063,1.51141141271498,1.54227252690289,0.812839312631559,1.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| |||
|short_description=p5@TPGS2 | |||
}} |
Revision as of 17:22, 11 September 2013
Short description: | p5@TPGS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TPGS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_ENST00000383056_5end |
EntrezGene: | TPGS2 |
HGNC: | 24561 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.21e-10 | 121 |
embryonic cell | 5.07e-08 | 250 |
endothelial cell of vascular tree | 2.72e-07 | 24 |
endothelial cell | 6.33e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.17e-12 | 78 |
vascular system | 2.17e-12 | 78 |
epithelial vesicle | 2.34e-09 | 78 |
vessel | 7.25e-09 | 68 |
somite | 1.02e-08 | 71 |
presomitic mesoderm | 1.02e-08 | 71 |
presumptive segmental plate | 1.02e-08 | 71 |
dermomyotome | 1.02e-08 | 71 |
trunk paraxial mesoderm | 1.02e-08 | 71 |
cell layer | 1.12e-08 | 309 |
unilaminar epithelium | 1.85e-08 | 148 |
paraxial mesoderm | 1.87e-08 | 72 |
presumptive paraxial mesoderm | 1.87e-08 | 72 |
dense mesenchyme tissue | 3.35e-08 | 73 |
epithelial tube open at both ends | 7.99e-08 | 59 |
blood vessel | 7.99e-08 | 59 |
blood vasculature | 7.99e-08 | 59 |
vascular cord | 7.99e-08 | 59 |
larynx | 8.47e-08 | 9 |
epithelium | 1.41e-07 | 306 |
multilaminar epithelium | 3.29e-07 | 83 |
dermis | 4.04e-07 | 9 |
dermatome | 4.04e-07 | 9 |
future dermis | 4.04e-07 | 9 |
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