FFCP PHASE1:Hg19::chr17:8924926..8924945,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2449|description=CAGE_peak_at_chr17:8924926..8924945,+|id=chr17:8924926..8924945,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000128;5.56e-07;7!CL:0000126;5.56e-07;7!CL:0000127;5.56e-07;7|ontology_enrichment_celltype_v019_2=CL:0000128,5.92e-07,7;CL:0000126,5.92e-07,7;CL:0000127,5.92e-07,7;CL:0002453,5.92e-07,7;CL:0002605,7.90e-07,3;CL:0000135,9.07e-07,3;CL:0000388,9.07e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.37e-30!115;UBERON:0001017!6.76e-21!82;UBERON:0005743!4.15e-20!86;UBERON:0001049!1.49e-19!57;UBERON:0005068!1.49e-19!57;UBERON:0006241!1.49e-19!57;UBERON:0007135!1.49e-19!57;UBERON:0000073!2.96e-18!94;UBERON:0001016!2.96e-18!94;UBERON:0004121!1.51e-16!169;UBERON:0000924!1.77e-16!173;UBERON:0006601!1.77e-16!173;UBERON:0000955!5.01e-16!69;UBERON:0006238!5.01e-16!69;UBERON:0002616!9.95e-15!59;UBERON:0000062!1.79e-13!511;UBERON:0000153!5.56e-13!129;UBERON:0007811!5.56e-13!129;UBERON:0003075!8.92e-13!86;UBERON:0007284!8.92e-13!86;UBERON:0002346!1.49e-12!90;UBERON:0000033!2.50e-12!123;UBERON:0002020!6.41e-12!34;UBERON:0003528!6.41e-12!34;UBERON:0003080!7.62e-12!42;UBERON:0001893!2.39e-11!34;UBERON:0002780!3.34e-11!41;UBERON:0001890!3.34e-11!41;UBERON:0006240!3.34e-11!41;UBERON:0002791!5.34e-11!33;UBERON:0001869!2.36e-10!32;UBERON:0000468!7.73e-10!659;UBERON:0003076!1.26e-09!15;UBERON:0003057!1.26e-09!15;UBERON:0000922!4.24e-09!612;UBERON:0000467!2.23e-08!625;UBERON:0000064!2.44e-08!219;UBERON:0000480!2.86e-08!626;UBERON:0002050!4.44e-08!605;UBERON:0005423!4.44e-08!605;UBERON:0000923!9.38e-08!604;UBERON:0005291!9.38e-08!604;UBERON:0006598!9.38e-08!604;UBERON:0002532!9.38e-08!604;UBERON:0002298!1.63e-07!8;UBERON:0004733!1.78e-07!12;UBERON:0002028!1.78e-07!12;UBERON:0007277!1.78e-07!12;UBERON:0000956!3.27e-07!25;UBERON:0000203!3.27e-07!25;UBERON:0002308!8.81e-07!9;UBERON:0000125!8.81e-07!9|ontology_enrichment_uberon_v019=UBERON:0002298;3.80e-11;6!UBERON:0004733;4.46e-09;12!UBERON:0002028;4.46e-09;12!UBERON:0004732;2.91e-08;13!UBERON:0004921;4.44e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.11e-19,114;UBERON:0003076,1.56e-13,15;UBERON:0003057,1.56e-13,15;UBERON:0002298,1.25e-11,6;UBERON:0004733,2.81e-09,12;UBERON:0002028,2.81e-09,12;UBERON:0007277,2.81e-09,12;UBERON:0011216,1.05e-08,223;UBERON:0004732,1.91e-08,13;UBERON:0004121,4.53e-07,171;UBERON:0000924,4.53e-07,171;UBERON:0006601,4.53e-07,171;UBERON:0001017,7.67e-07,81;UBERON:0000988,9.07e-07,3;UBERON:0007846,9.07e-07,3;UBERON:0000043,9.07e-07,3;UBERON:0007845,9.07e-07,3|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,3.48900583986214,0.218441372130172,0,0.123766352960047,0,0,0,0,0,1.10808952269109,0.612002073732759,3.76145665773705,4.29353980696585,2.6006140763848,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,14.2560342873846,2.22540236350701,0,0,0.168336113954066,0,0,0,0,5.85928429735728,0,0.179389635688862,0,0.635795703478686,0,0,0,0,0,0.0974370051611986,0,0.460249493211497,1.45481451136931,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,3.12899064659632,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.491953754172454,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,2.37061319387782,0,0,0,0,0,1.6798212819886,0.141775097242386,0.179117045405697,1.16253575405585,3.06706143332169,0,0,0.621984346622316,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,1.30139853857622,0.773288812777695,2.34522771468088,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0.686286847621712,0,0,0,0.303127571446259,0,1.20956117331872,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.362578348774867,0.40101294060657,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.9273691048295,0.27470839445503,0.165018999841176,0,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14140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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2449 | |||
|description=CAGE_peak_at_chr17:8924926..8924945,+ | |||
|id=chr17:8924926..8924945,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000128;5.56e-07;7!CL:0000126;5.56e-07;7!CL:0000127;5.56e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.92e-07,7;CL:0000126,5.92e-07,7;CL:0000127,5.92e-07,7;CL:0002453,5.92e-07,7;CL:0002605,7.90e-07,3;CL:0000135,9.07e-07,3;CL:0000388,9.07e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-30!115;UBERON:0001017!6.76e-21!82;UBERON:0005743!4.15e-20!86;UBERON:0001049!1.49e-19!57;UBERON:0005068!1.49e-19!57;UBERON:0006241!1.49e-19!57;UBERON:0007135!1.49e-19!57;UBERON:0000073!2.96e-18!94;UBERON:0001016!2.96e-18!94;UBERON:0004121!1.51e-16!169;UBERON:0000924!1.77e-16!173;UBERON:0006601!1.77e-16!173;UBERON:0000955!5.01e-16!69;UBERON:0006238!5.01e-16!69;UBERON:0002616!9.95e-15!59;UBERON:0000062!1.79e-13!511;UBERON:0000153!5.56e-13!129;UBERON:0007811!5.56e-13!129;UBERON:0003075!8.92e-13!86;UBERON:0007284!8.92e-13!86;UBERON:0002346!1.49e-12!90;UBERON:0000033!2.50e-12!123;UBERON:0002020!6.41e-12!34;UBERON:0003528!6.41e-12!34;UBERON:0003080!7.62e-12!42;UBERON:0001893!2.39e-11!34;UBERON:0002780!3.34e-11!41;UBERON:0001890!3.34e-11!41;UBERON:0006240!3.34e-11!41;UBERON:0002791!5.34e-11!33;UBERON:0001869!2.36e-10!32;UBERON:0000468!7.73e-10!659;UBERON:0003076!1.26e-09!15;UBERON:0003057!1.26e-09!15;UBERON:0000922!4.24e-09!612;UBERON:0000467!2.23e-08!625;UBERON:0000064!2.44e-08!219;UBERON:0000480!2.86e-08!626;UBERON:0002050!4.44e-08!605;UBERON:0005423!4.44e-08!605;UBERON:0000923!9.38e-08!604;UBERON:0005291!9.38e-08!604;UBERON:0006598!9.38e-08!604;UBERON:0002532!9.38e-08!604;UBERON:0002298!1.63e-07!8;UBERON:0004733!1.78e-07!12;UBERON:0002028!1.78e-07!12;UBERON:0007277!1.78e-07!12;UBERON:0000956!3.27e-07!25;UBERON:0000203!3.27e-07!25;UBERON:0002308!8.81e-07!9;UBERON:0000125!8.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.80e-11;6!UBERON:0004733;4.46e-09;12!UBERON:0002028;4.46e-09;12!UBERON:0004732;2.91e-08;13!UBERON:0004921;4.44e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.11e-19,114;UBERON:0003076,1.56e-13,15;UBERON:0003057,1.56e-13,15;UBERON:0002298,1.25e-11,6;UBERON:0004733,2.81e-09,12;UBERON:0002028,2.81e-09,12;UBERON:0007277,2.81e-09,12;UBERON:0011216,1.05e-08,223;UBERON:0004732,1.91e-08,13;UBERON:0004121,4.53e-07,171;UBERON:0000924,4.53e-07,171;UBERON:0006601,4.53e-07,171;UBERON:0001017,7.67e-07,81;UBERON:0000988,9.07e-07,3;UBERON:0007846,9.07e-07,3;UBERON:0000043,9.07e-07,3;UBERON:0007845,9.07e-07,3 | |||
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| |||
|short_description=p@chr17:8924926..8924945,+ | |||
}} |
Revision as of 16:46, 11 September 2013
Short description: | p@chr17:8924926..8924945, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:8924926..8924945, + |
Coexpression cluster: | C2449_Synoviocyte_Fibroblast_left_aorta_pharyngeal_anaplastic_leiomyoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.92e-07 | 7 |
macroglial cell | 5.92e-07 | 7 |
astrocyte | 5.92e-07 | 7 |
oligodendrocyte precursor cell | 5.92e-07 | 7 |
astrocyte of the cerebral cortex | 7.90e-07 | 3 |
fibrocyte | 9.07e-07 | 3 |
tendon cell | 9.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.11e-19 | 114 |
posterior neural tube | 1.56e-13 | 15 |
chordal neural plate | 1.56e-13 | 15 |
brainstem | 1.25e-11 | 6 |
segmental subdivision of hindbrain | 2.81e-09 | 12 |
hindbrain | 2.81e-09 | 12 |
presumptive hindbrain | 2.81e-09 | 12 |
organ system subdivision | 1.05e-08 | 223 |
segmental subdivision of nervous system | 1.91e-08 | 13 |
ectoderm-derived structure | 4.53e-07 | 171 |
ectoderm | 4.53e-07 | 171 |
presumptive ectoderm | 4.53e-07 | 171 |
central nervous system | 7.67e-07 | 81 |
pons | 9.07e-07 | 3 |
dense regular connective tissue | 9.07e-07 | 3 |
tendon | 9.07e-07 | 3 |
regular connective tissue | 9.07e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.