FFCP PHASE1:Hg19::chr17:8066256..8066301,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6844 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12643 | |||
|TSSclassifier=S | |||
|UniProt=P63027 | |||
|association_with_transcript=0bp_to_ENST00000316509,ENST00000481878,ENST00000498285,NM_014232,uc010cnt.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_VAMP2_5end | |||
|id=chr17:8066256..8066301,- | |||
|ontology_enrichment_celltype=CL:0000791!1.77e-07!18;CL:0000789!1.77e-07!18;CL:0002420!1.77e-07!18;CL:0002419!1.77e-07!18;CL:0000790!1.77e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.78e-07;18!CL:0000789;1.78e-07;18!CL:0002419;1.78e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.77e-07,18;CL:0000789,1.77e-07,18;CL:0002420,1.77e-07,18;CL:0002419,1.77e-07,18;CL:0000790,1.77e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.85e-09;82!CL:0000790;1.78e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@VAMP2 | |||
}} |
Revision as of 16:38, 11 September 2013
Short description: | p1@VAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_VAMP2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000316509, ENST00000481878, ENST00000498285, NM_014232, uc010cnt.1_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | P63027 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.77e-07 | 18 |
alpha-beta T cell | 1.77e-07 | 18 |
immature T cell | 1.77e-07 | 18 |
mature T cell | 1.77e-07 | 18 |
immature alpha-beta T cell | 1.77e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.