FFCP PHASE1:Hg19::chr17:80061780..80061787,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:80061780..80061787,-|id=chr17:80061780..80061787,-|ontology_enrichment_celltype=CL:0000066!1.57e-18!254;CL:0000223!2.93e-07!59;CL:0002251!9.35e-07!21|ontology_enrichment_celltype_v019=CL:1001319;1.18e-19;1!CL:1000600;1.18e-19;1!CL:0002253;2.60e-10;2!CL:0002202;6.10e-09;9!CL:0002632;6.10e-09;9!CL:0000322;2.71e-07;3!CL:0002328;2.71e-07;3|ontology_enrichment_celltype_v019_2=CL:1001319,1.30e-19,1;CL:1000600,1.30e-19,1;CL:0002253,2.27e-10,2;CL:0002202,6.11e-09,9;CL:0002632,6.11e-09,9;CL:0002328,2.19e-07,3;CL:0002076,3.20e-07,42;CL:0000322,3.35e-07,3|ontology_enrichment_development_v019=UBERON:0008814;1.43e-10;2!UBERON:0010056;1.43e-10;2|ontology_enrichment_disease=DOID:305!3.67e-31!106;DOID:0050687!9.49e-26!143;DOID:162!7.38e-19!235;DOID:14566!3.95e-18!239;DOID:7!1.54e-11!39;DOID:1749!1.58e-11!14;DOID:1325!1.36e-07!7;DOID:3904!1.36e-07!7;DOID:299!5.37e-07!25|ontology_enrichment_disease_v019=DOID:3910;2.60e-10;2!DOID:4468;2.60e-10;2!DOID:299;4.45e-07;25|ontology_enrichment_disease_v019_2=DOID:4468,2.72e-10,2;DOID:3910,3.58e-10,2;DOID:305,5.09e-08,106;DOID:0050687,1.34e-07,143;DOID:299,4.60e-07,25|ontology_enrichment_uberon=UBERON:0000344!5.20e-11!12;UBERON:0003729!5.87e-11!5;UBERON:0003343!1.50e-09!4;UBERON:0004785!1.50e-09!4;UBERON:0000077!2.08e-07!130;UBERON:0001007!3.44e-07!155;UBERON:0001555!3.44e-07!155;UBERON:0007026!3.44e-07!155;UBERON:0004119!3.99e-07!169;UBERON:0000925!3.99e-07!169;UBERON:0006595!3.99e-07!169;UBERON:0000466!7.33e-07!126|ontology_enrichment_uberon_v019=UBERON:0004645;1.18e-19;1!UBERON:0001256;1.18e-19;1!UBERON:0001259;1.18e-19;1!UBERON:0000485;3.14e-11;7!UBERON:0001255;1.64e-10;2!UBERON:0001556;1.64e-10;2!UBERON:0004903;2.60e-10;2!UBERON:0002173;2.60e-10;2!UBERON:0002186;2.60e-10;2!UBERON:0003350;4.83e-10;8!UBERON:0000344;7.66e-09;20!UBERON:0005911;4.15e-08;36!UBERON:0001723;1.82e-07;3!UBERON:0001033;1.82e-07;3!UBERON:0004821;2.71e-07;3!UBERON:0007499;2.71e-07;3!UBERON:0004815;2.71e-07;3!UBERON:0003215;2.71e-07;3!UBERON:0010368;2.71e-07;3!UBERON:0009911;2.71e-07;3!UBERON:0002299;2.71e-07;3!UBERON:0002031;2.71e-07;3!UBERON:0006524;2.71e-07;3!UBERON:0008874;2.71e-07;3!UBERON:0002169;2.71e-07;3!UBERON:0004894;2.71e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.30e-19,1;UBERON:0001256,1.30e-19,1;UBERON:0001259,1.30e-19,1;UBERON:0001255,1.72e-10,2;UBERON:0001556,1.72e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0003350,4.62e-10,8;UBERON:0000485,5.00e-09,9;UBERON:0000344,7.46e-09,20;UBERON:0001723,1.82e-07,3;UBERON:0001033,1.82e-07,3;UBERON:0010056,1.82e-07,3;UBERON:0004815,2.19e-07,3;UBERON:0002031,2.19e-07,3;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539210106883961,0.358042349351218,0,0,0,0,0,0,0,1.04171104434093,0,0,0.568967241427498,1.01701460117107,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0.225595660617181,0,0,0.189753732724185,0,0,1.14262965711403,1.55488378577335,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:80061780..80061787,- | |||
|id=chr17:80061780..80061787,- | |||
|ontology_enrichment_celltype=CL:0000066!1.57e-18!254;CL:0000223!2.93e-07!59;CL:0002251!9.35e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:1001319;1.18e-19;1!CL:1000600;1.18e-19;1!CL:0002253;2.60e-10;2!CL:0002202;6.10e-09;9!CL:0002632;6.10e-09;9!CL:0000322;2.71e-07;3!CL:0002328;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.30e-19,1;CL:1000600,1.30e-19,1;CL:0002253,2.27e-10,2;CL:0002202,6.11e-09,9;CL:0002632,6.11e-09,9;CL:0002328,2.19e-07,3;CL:0002076,3.20e-07,42;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.43e-10;2!UBERON:0010056;1.43e-10;2 | |||
|ontology_enrichment_disease=DOID:305!3.67e-31!106;DOID:0050687!9.49e-26!143;DOID:162!7.38e-19!235;DOID:14566!3.95e-18!239;DOID:7!1.54e-11!39;DOID:1749!1.58e-11!14;DOID:1325!1.36e-07!7;DOID:3904!1.36e-07!7;DOID:299!5.37e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.60e-10;2!DOID:4468;2.60e-10;2!DOID:299;4.45e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.72e-10,2;DOID:3910,3.58e-10,2;DOID:305,5.09e-08,106;DOID:0050687,1.34e-07,143;DOID:299,4.60e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000344!5.20e-11!12;UBERON:0003729!5.87e-11!5;UBERON:0003343!1.50e-09!4;UBERON:0004785!1.50e-09!4;UBERON:0000077!2.08e-07!130;UBERON:0001007!3.44e-07!155;UBERON:0001555!3.44e-07!155;UBERON:0007026!3.44e-07!155;UBERON:0004119!3.99e-07!169;UBERON:0000925!3.99e-07!169;UBERON:0006595!3.99e-07!169;UBERON:0000466!7.33e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.18e-19;1!UBERON:0001256;1.18e-19;1!UBERON:0001259;1.18e-19;1!UBERON:0000485;3.14e-11;7!UBERON:0001255;1.64e-10;2!UBERON:0001556;1.64e-10;2!UBERON:0004903;2.60e-10;2!UBERON:0002173;2.60e-10;2!UBERON:0002186;2.60e-10;2!UBERON:0003350;4.83e-10;8!UBERON:0000344;7.66e-09;20!UBERON:0005911;4.15e-08;36!UBERON:0001723;1.82e-07;3!UBERON:0001033;1.82e-07;3!UBERON:0004821;2.71e-07;3!UBERON:0007499;2.71e-07;3!UBERON:0004815;2.71e-07;3!UBERON:0003215;2.71e-07;3!UBERON:0010368;2.71e-07;3!UBERON:0009911;2.71e-07;3!UBERON:0002299;2.71e-07;3!UBERON:0002031;2.71e-07;3!UBERON:0006524;2.71e-07;3!UBERON:0008874;2.71e-07;3!UBERON:0002169;2.71e-07;3!UBERON:0004894;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.30e-19,1;UBERON:0001256,1.30e-19,1;UBERON:0001259,1.30e-19,1;UBERON:0001255,1.72e-10,2;UBERON:0001556,1.72e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0003350,4.62e-10,8;UBERON:0000485,5.00e-09,9;UBERON:0000344,7.46e-09,20;UBERON:0001723,1.82e-07,3;UBERON:0001033,1.82e-07,3;UBERON:0010056,1.82e-07,3;UBERON:0004815,2.19e-07,3;UBERON:0002031,2.19e-07,3;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539210106883961,0.358042349351218,0,0,0,0,0,0,0,1.04171104434093,0,0,0.568967241427498,1.01701460117107,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0.225595660617181,0,0,0.189753732724185,0,0,1.14262965711403,1.55488378577335,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0.783939179315021,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.26961417541674,0,0,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.471878893390961,0.183428598521679,3.9278726491115,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0.142953088353313,0,1.62737995515375,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0.588901401691458,0,0,0,0,0,0,0,0,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.98339014767326,0.633492505057185,0.713921808193872,2.6721740526556,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03508171527436,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:80061780..80061787,- | |||
}} |
Revision as of 16:32, 11 September 2013
Short description: | p@chr17:80061780..80061787, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:80061780..80061787, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.30e-19 | 1 |
lower urinary tract cell | 1.30e-19 | 1 |
epithelial cell of large intestine | 2.27e-10 | 2 |
epithelial cell of tracheobronchial tree | 6.11e-09 | 9 |
epithelial cell of lower respiratory tract | 6.11e-09 | 9 |
bronchial epithelial cell | 2.19e-07 | 3 |
endo-epithelial cell | 3.20e-07 | 42 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.30e-19 | 1 |
wall of urinary bladder | 1.30e-19 | 1 |
mucosa of urinary bladder | 1.30e-19 | 1 |
urinary bladder | 1.72e-10 | 2 |
lower urinary tract | 1.72e-10 | 2 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
epithelium of mucosa | 4.62e-10 | 8 |
simple columnar epithelium | 5.00e-09 | 9 |
mucosa | 7.46e-09 | 20 |
tongue | 1.82e-07 | 3 |
gustatory system | 1.82e-07 | 3 |
future tongue | 1.82e-07 | 3 |
lower respiratory tract epithelium | 2.19e-07 | 3 |
epithelium of bronchus | 2.19e-07 | 3 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.72e-10 | 2 |
lung adenocarcinoma | 3.58e-10 | 2 |
carcinoma | 5.09e-08 | 106 |
cell type cancer | 1.34e-07 | 143 |
adenocarcinoma | 4.60e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.